RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 ZSWIM5Q9P217 1185 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
NCL-201ENST00000322723 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
NCL-201ENST00000322723 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
NCL-201ENST00000322723 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 RALYLQ86SE5 291 aaKnown RBP13.97□□□□□ -0.17
NCL-201ENST00000322723 BRIP1Q9BX63 1249 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 KRT23Q9C075 422 aa13.97□□□□□ -0.17
NCL-201ENST00000322723 AIDAQ96BJ3 306 aa13.96□□□□□ -0.17
NCL-201ENST00000322723 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
NCL-201ENST00000322723 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.17
NCL-201ENST00000322723 TOM1O60784 492 aa13.96□□□□□ -0.17
NCL-201ENST00000322723 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.17
NCL-201ENST00000322723 IFNAR1P17181 557 aa13.96□□□□□ -0.17
NCL-201ENST00000322723 PPP6R2O75170 966 aa13.96□□□□□ -0.18
NCL-201ENST00000322723 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.18
NCL-201ENST00000322723 CCAR1Q8IX12 1150 aaKnown RBP13.96□□□□□ -0.18
NCL-201ENST00000322723 KCNG4Q8TDN1 519 aa13.96□□□□□ -0.18
NCL-201ENST00000322723 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.18
NCL-201ENST00000322723 FAM84BQ96KN1 310 aaPredicted RBP13.96□□□□□ -0.18
NCL-201ENST00000322723 ARMT1Q9H993 441 aa13.96□□□□□ -0.18
NCL-201ENST00000322723 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.18
NCL-201ENST00000322723 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.18
NCL-201ENST00000322723 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.18
NCL-201ENST00000322723 ERICH4A6NGS2 130 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 B4E1Z4 1266 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 C8orf76Q96K31 380 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 CDKL5O76039 1030 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
NCL-201ENST00000322723 FUT2Q10981 343 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 ANO6Q4KMQ2 910 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 TIGD1Q96MW7 591 aa13.95□□□□□ -0.18
NCL-201ENST00000322723 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 PRKAB2O43741 272 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 NT5C2P49902 561 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.18
NCL-201ENST00000322723 MROH7-TTC4A0A0A0MT08 1334 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 TPM3P06753 285 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
NCL-201ENST00000322723 DHX40Q8IX18 779 aaKnown RBP13.94□□□□□ -0.18
NCL-201ENST00000322723 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 CMA1P23946 247 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 SHISA4Q96DD7 197 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 NPHP1O15259 732 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 CTDSPL2Q05D32 466 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 TRDNQ13061 729 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 PPARAQ07869 468 aa13.93□□□□□ -0.18
NCL-201ENST00000322723 MKRN1Q9UHC7 482 aaKnown RBP13.93□□□□□ -0.18
NCL-201ENST00000322723 ZBTB43O43298 467 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 CAMK4Q16566 473 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 NAPBQ9H115 298 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 WTIPA6NIX2 430 aaPredicted RBP13.92□□□□□ -0.18
NCL-201ENST00000322723 STX1AQ16623 288 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 KRT40Q6A162 431 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 C11orf57Q6ZUT1 292 aaPredicted RBP13.92□□□□□ -0.18
NCL-201ENST00000322723 PDCL2Q8N4E4 241 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 NSUN4Q96CB9 384 aaKnown RBP13.92□□□□□ -0.18
NCL-201ENST00000322723 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
NCL-201ENST00000322723 ZNF75DP51815 510 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 LUZP1Q86V48 1076 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
NCL-201ENST00000322723 MYH1P12882 1939 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 ORC4O43929 436 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
NCL-201ENST00000322723 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
NCL-201ENST00000322723 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 OTUD7BQ6GQQ9 843 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 TMTC2Q8N394 836 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 GJB4Q9NTQ9 266 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 SPTLC2O15270 562 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 NDUFA8P51970 172 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 TMEM67Q5HYA8 995 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 RESP18Q5W5W9 173 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 MRFAP1L1Q96HT8 127 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 AIFM3Q96NN9 605 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
NCL-201ENST00000322723 RNF41Q9H4P4 317 aaPredicted RBP13.91□□□□□ -0.18
NCL-201ENST00000322723 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms