RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 A0A087WWV3 80 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 ERICH2A1L162 156 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 GSG1L2A8MUP6 293 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 NEMFO60524 1076 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
LSG1-201ENST00000265245 SPATA31A1Q5TZJ5 1347 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 RTL9Q8NET4 1388 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 NUP98P52948 1817 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 PFKFB1P16118 471 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
LSG1-201ENST00000265245 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
LSG1-201ENST00000265245 RRP12Q5JTH9 1297 aaKnown RBP11.93□□□□□ -0.5
LSG1-201ENST00000265245 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
LSG1-201ENST00000265245 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 PNPLA7Q6ZV29 1317 aa11.93□□□□□ -0.5
LSG1-201ENST00000265245 NTSR2O95665 410 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 TPM4P67936 248 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 SLC26A6Q9BXS9 759 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
LSG1-201ENST00000265245 MYH15Q9Y2K3 1946 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 CHRNDQ07001 517 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
LSG1-201ENST00000265245 NTRK3Q16288 839 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 TRIM22Q8IYM9 498 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
LSG1-201ENST00000265245 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
LSG1-201ENST00000265245 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 PPP6R2O75170 966 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 HSPA1LP34931 641 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 GTF2F1P35269 517 aaKnown RBP eCLIP11.92□□□□□ -0.5
LSG1-201ENST00000265245 SYKP43405 635 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 ITPK1Q13572 414 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 STAG1Q8WVM7 1258 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
LSG1-201ENST00000265245 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
LSG1-201ENST00000265245 PRKAB2O43741 272 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
LSG1-201ENST00000265245 DPCR1Q3MIW9 517 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 TMTC2Q8N394 836 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
LSG1-201ENST00000265245 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 RANBP6O60518 1105 aaKnown RBP11.91□□□□□ -0.5
LSG1-201ENST00000265245 IFNAR1P17181 557 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSG1-201ENST00000265245 WTAPQ15007 396 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
LSG1-201ENST00000265245 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 BPIFA3Q9BQP9 254 aa11.91□□□□□ -0.5
LSG1-201ENST00000265245 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
LSG1-201ENST00000265245 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
LSG1-201ENST00000265245 RTN1Q16799 776 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
LSG1-201ENST00000265245 ABCF2Q9UG63 623 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 BIN1O00499 593 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
LSG1-201ENST00000265245 CYP7A1P22680 504 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 FBXO41Q8TF61 875 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 UBAC1Q9BSL1 405 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 NLRP12P59046 1061 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 PIP4K2BP78356 416 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
LSG1-201ENST00000265245 RAI14Q9P0K7 980 aa11.9□□□□□ -0.5
LSG1-201ENST00000265245 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.51
LSG1-201ENST00000265245 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 SMTNL1A8MU46 457 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 C16orf45Q96MC5 204 aaPredicted RBP11.89□□□□□ -0.51
LSG1-201ENST00000265245 GSDMDP57764 484 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 CBX1P83916 185 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 PTPAQ15257 358 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 NOSTRINQ8IVI9 506 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 ZKSCAN3Q9BRR0 538 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
LSG1-201ENST00000265245 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
LSG1-201ENST00000265245 TPD52L1Q16890 204 aaPredicted RBP11.89□□□□□ -0.51
LSG1-201ENST00000265245 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
LSG1-201ENST00000265245 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
LSG1-201ENST00000265245 CUTAO60888 179 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 RCAN1P53805 252 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 PPARAQ07869 468 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 MAP3K14Q99558 947 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 HPSEQ9Y251 543 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 SMC2O95347 1197 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 SKILP12757 684 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 CAVIN4Q5BKX8 364 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 SHC4Q6S5L8 630 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 NUP133Q8WUM0 1156 aa11.88□□□□□ -0.51
LSG1-201ENST00000265245 ESR2Q92731 530 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms