RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeastyeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDB1YPR184W BPT1P14772 1559 aa6.46□□□□□ -1.38
GDB1YPR184W KOG1P38873 1557 aa6.45□□□□□ -1.38
GDB1YPR184W MET10P39692 1035 aa6.45□□□□□ -1.38
GDB1YPR184W ORC1P54784 914 aaPredicted RBP6.45□□□□□ -1.38
GDB1YPR184W RTF1P53064 558 aa6.44□□□□□ -1.38
GDB1YPR184W NOP8Q08287 484 aaPredicted RBP6.44□□□□□ -1.38
GDB1YPR184W NSR1P27476 414 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
GDB1YPR184W POL1P13382 1468 aa6.42□□□□□ -1.38
GDB1YPR184W TRM732Q03496 1420 aa6.41□□□□□ -1.38
GDB1YPR184W YCF1P39109 1515 aaKnown RBP6.41□□□□□ -1.38
GDB1YPR184W PAP2P53632 584 aaKnown RBP6.41□□□□□ -1.38
GDB1YPR184W SWR1Q05471 1514 aa6.41□□□□□ -1.38
GDB1YPR184W PDR10P51533 1564 aa6.4□□□□□ -1.39
GDB1YPR184W TAF5P38129 798 aa6.38□□□□□ -1.39
GDB1YPR184W PAN1P32521 1480 aa6.38□□□□□ -1.39
GDB1YPR184W SUP35P05453 685 aaKnown RBP6.37□□□□□ -1.39
GDB1YPR184W SEC3P33332 1336 aaKnown RBP6.36□□□□□ -1.39
GDB1YPR184W SCC2Q04002 1493 aa6.35□□□□□ -1.39
GDB1YPR184W ESL2P36168 1195 aa6.34□□□□□ -1.39
GDB1YPR184W ENP2P48234 707 aaKnown RBP6.34□□□□□ -1.39
GDB1YPR184W EAF7P53911 425 aaKnown RBP6.34□□□□□ -1.39
GDB1YPR184W PDR5P33302 1511 aaKnown RBP6.31□□□□□ -1.4
GDB1YPR184W RRT14P40470 206 aa6.3□□□□□ -1.4
GDB1YPR184W IRC20Q06554 1556 aa6.3□□□□□ -1.4
GDB1YPR184W DRS2P39524 1355 aa6.29□□□□□ -1.4
GDB1YPR184W SPO14P36126 1683 aa6.29□□□□□ -1.4
GDB1YPR184W KAR2P16474 682 aaKnown RBP6.29□□□□□ -1.4
GDB1YPR184W TPM1P17536 199 aaKnown RBP6.28□□□□□ -1.4
GDB1YPR184W GCN2P15442 1659 aa6.28□□□□□ -1.4
GDB1YPR184W BNR1P40450 1375 aa6.28□□□□□ -1.4
GDB1YPR184W UBP1P25037 809 aa6.28□□□□□ -1.4
GDB1YPR184W RPO21P04050 1733 aaKnown RBP6.28□□□□□ -1.4
GDB1YPR184W YPK9Q12697 1472 aa6.27□□□□□ -1.41
GDB1YPR184W MIF2P35201 549 aa6.27□□□□□ -1.41
GDB1YPR184W DNA2P38859 1522 aa6.27□□□□□ -1.41
GDB1YPR184W KRI1P42846 591 aaKnown RBP6.27□□□□□ -1.41
GDB1YPR184W LEO1P38439 464 aa6.25□□□□□ -1.41
GDB1YPR184W COG8Q04632 607 aa6.24□□□□□ -1.41
GDB1YPR184W TOP2P06786 1428 aaKnown RBP6.24□□□□□ -1.41
GDB1YPR184W YOR1P53049 1477 aa6.24□□□□□ -1.41
GDB1YPR184W SEN54Q02825 467 aaPredicted RBP6.23□□□□□ -1.41
GDB1YPR184W RKR1Q04781 1562 aa6.23□□□□□ -1.41
GDB1YPR184W MAK21Q12176 1025 aaKnown RBP6.23□□□□□ -1.41
GDB1YPR184W PRP40P33203 583 aaKnown RBP6.22□□□□□ -1.41
GDB1YPR184W RAD2P07276 1031 aa6.22□□□□□ -1.41
GDB1YPR184W RIA1P53893 1110 aa6.22□□□□□ -1.41
GDB1YPR184W YMR196WQ04336 1088 aa6.21□□□□□ -1.42
GDB1YPR184W PKH1Q03407 766 aa6.2□□□□□ -1.42
GDB1YPR184W YFR016CP43597 1233 aaKnown RBP6.19□□□□□ -1.42
GDB1YPR184W MEC3Q02574 474 aa6.19□□□□□ -1.42
GDB1YPR184W DOP1Q03921 1698 aa6.19□□□□□ -1.42
GDB1YPR184W NCB2Q92317 146 aa6.19□□□□□ -1.42
GDB1YPR184W PDI1P17967 522 aaKnown RBP6.18□□□□□ -1.42
GDB1YPR184W KIP3P53086 805 aaKnown RBP6.18□□□□□ -1.42
GDB1YPR184W LAM6Q08001 693 aa6.18□□□□□ -1.42
GDB1YPR184W PDR12Q02785 1511 aa6.17□□□□□ -1.42
GDB1YPR184W CSE4P36012 229 aa6.17□□□□□ -1.42
GDB1YPR184W ECM16Q04217 1267 aaKnown RBP6.17□□□□□ -1.42
GDB1YPR184W MMS1Q06211 1407 aa6.16□□□□□ -1.42
GDB1YPR184W PDS5Q04264 1277 aa6.16□□□□□ -1.42
GDB1YPR184W SVF1Q05515 481 aa6.16□□□□□ -1.42
GDB1YPR184W RPO31P04051 1460 aa6.16□□□□□ -1.42
GDB1YPR184W IKI3Q06706 1349 aaKnown RBP6.16□□□□□ -1.42
GDB1YPR184W MYO4P32492 1471 aa6.16□□□□□ -1.42
GDB1YPR184W YAP3P38749 330 aa6.16□□□□□ -1.42
GDB1YPR184W SPT5P27692 1063 aaKnown RBP6.14□□□□□ -1.43
GDB1YPR184W NUP157P40064 1391 aaKnown RBP6.14□□□□□ -1.43
GDB1YPR184W SPE2P21182 396 aa6.14□□□□□ -1.43
GDB1YPR184W CHZ1P40019 153 aaPredicted RBP6.14□□□□□ -1.43
GDB1YPR184W RPA190P10964 1664 aaKnown RBP6.14□□□□□ -1.43
GDB1YPR184W BUD27P43573 796 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
GDB1YPR184W ATG13Q06628 738 aa6.13□□□□□ -1.43
GDB1YPR184W RTR1P40084 226 aaPredicted RBP6.13□□□□□ -1.43
GDB1YPR184W RRP8P38961 392 aaKnown RBP6.13□□□□□ -1.43
GDB1YPR184W TIF4632P39936 914 aaKnown RBP6.13□□□□□ -1.43
GDB1YPR184W NOP2P40991 618 aaKnown RBP6.13□□□□□ -1.43
GDB1YPR184W NUP192P47054 1683 aa6.13□□□□□ -1.43
GDB1YPR184W SNQ2P32568 1501 aaKnown RBP6.13□□□□□ -1.43
GDB1YPR184W YRF1-1P0CX20 1796 aa6.12□□□□□ -1.43
GDB1YPR184W YRF1-5P0CX21 1796 aa6.12□□□□□ -1.43
GDB1YPR184W YRF1-8P0CX22 1796 aa6.12□□□□□ -1.43
GDB1YPR184W ASF1P32447 279 aa6.12□□□□□ -1.43
GDB1YPR184W HUL5P53119 910 aa6.12□□□□□ -1.43
GDB1YPR184W CLB5P30283 435 aa6.12□□□□□ -1.43
GDB1YPR184W NSE3Q05541 303 aa6.12□□□□□ -1.43
GDB1YPR184W TAF8Q03750 510 aa6.12□□□□□ -1.43
GDB1YPR184W YPR148CQ06523 435 aa6.12□□□□□ -1.43
GDB1YPR184W GEA2P39993 1459 aaKnown RBP6.11□□□□□ -1.43
GDB1YPR184W DAL5P15365 543 aa6.11□□□□□ -1.43
GDB1YPR184W PDR15Q04182 1529 aaKnown RBP6.1□□□□□ -1.43
GDB1YPR184W YLR419WQ06698 1435 aaKnown RBP6.1□□□□□ -1.43
GDB1YPR184W GRX4P32642 244 aa6.09□□□□□ -1.43
GDB1YPR184W SSA2P10592 639 aaKnown RBP6.09□□□□□ -1.44
GDB1YPR184W SNF2P22082 1703 aa6.08□□□□□ -1.44
GDB1YPR184W SPP41P38904 1435 aa6.08□□□□□ -1.44
GDB1YPR184W HPC2Q01448 625 aa6.08□□□□□ -1.44
GDB1YPR184W NTE1Q04958 1679 aa6.08□□□□□ -1.44
GDB1YPR184W BDP1P46678 594 aa6.08□□□□□ -1.44
GDB1YPR184W CDC45Q08032 650 aa6.08□□□□□ -1.44
GDB1YPR184W MDS3P53094 1487 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms