RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeastyeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP6AYPR052C VTH1P40438 1549 aa7.86□□□□□ -1.15
NHP6AYPR052C VTH2P40890 1549 aa7.86□□□□□ -1.15
NHP6AYPR052C NUP170P38181 1502 aa7.84□□□□□ -1.15
NHP6AYPR052C MYO4P32492 1471 aa7.83□□□□□ -1.16
NHP6AYPR052C STU1P38198 1513 aa7.83□□□□□ -1.16
NHP6AYPR052C RPO21P04050 1733 aaKnown RBP7.82□□□□□ -1.16
NHP6AYPR052C SNT2P53127 1403 aa7.8□□□□□ -1.16
NHP6AYPR052C TY1B-JR2P47100 1755 aaKnown RBP7.8□□□□□ -1.16
NHP6AYPR052C TY1B-ER2Q03619 1755 aa7.8□□□□□ -1.16
NHP6AYPR052C TY1B-MR1Q04214 1755 aa7.8□□□□□ -1.16
NHP6AYPR052C TY1B-MR2Q04670 1755 aaKnown RBP7.8□□□□□ -1.16
NHP6AYPR052C TY1B-LR1Q12088 1755 aaKnown RBP7.8□□□□□ -1.16
NHP6AYPR052C TY1B-NL1Q12112 1755 aa7.8□□□□□ -1.16
NHP6AYPR052C TY1B-GR1Q12141 1755 aa7.8□□□□□ -1.16
NHP6AYPR052C TY1B-BLQ12490 1755 aa7.8□□□□□ -1.16
NHP6AYPR052C MET10P39692 1035 aa7.78□□□□□ -1.16
NHP6AYPR052C TRM3Q07527 1436 aa7.77□□□□□ -1.17
NHP6AYPR052C YOR093CQ12275 1648 aa7.76□□□□□ -1.17
NHP6AYPR052C STH1P32597 1359 aa7.74□□□□□ -1.17
NHP6AYPR052C SPO14P36126 1683 aa7.74□□□□□ -1.17
NHP6AYPR052C ULS1Q08562 1619 aa7.74□□□□□ -1.17
NHP6AYPR052C RTT106P40161 455 aa7.72□□□□□ -1.17
NHP6AYPR052C SNQ2P32568 1501 aaKnown RBP7.72□□□□□ -1.17
NHP6AYPR052C YTA7P40340 1379 aa7.7□□□□□ -1.18
NHP6AYPR052C DOP1Q03921 1698 aa7.69□□□□□ -1.18
NHP6AYPR052C PDR12Q02785 1511 aa7.68□□□□□ -1.18
NHP6AYPR052C IQG1Q12280 1495 aa7.68□□□□□ -1.18
NHP6AYPR052C PDR10P51533 1564 aa7.67□□□□□ -1.18
NHP6AYPR052C BUD3P25558 1636 aa7.67□□□□□ -1.18
NHP6AYPR052C GDB1Q06625 1536 aa7.63□□□□□ -1.19
NHP6AYPR052C NUP157P40064 1391 aaKnown RBP7.59□□□□□ -1.19
NHP6AYPR052C MLP2P40457 1679 aa7.58□□□□□ -1.2
NHP6AYPR052C PDR15Q04182 1529 aaKnown RBP7.57□□□□□ -1.2
NHP6AYPR052C CHC1P22137 1653 aaKnown RBP7.51□□□□□ -1.21
NHP6AYPR052C DNF3Q12674 1656 aa7.51□□□□□ -1.21
NHP6AYPR052C YAP3P38749 330 aa7.49□□□□□ -1.21
NHP6AYPR052C ARO1P08566 1588 aaKnown RBP7.49□□□□□ -1.21
NHP6AYPR052C TAF7Q05021 590 aa7.47□□□□□ -1.21
NHP6AYPR052C BNR1P40450 1375 aa7.46□□□□□ -1.21
NHP6AYPR052C URN1Q06525 465 aaKnown RBP7.45□□□□□ -1.22
NHP6AYPR052C MAK10Q02197 733 aa7.44□□□□□ -1.22
NHP6AYPR052C TY3B-GQ99315 1547 aa7.43□□□□□ -1.22
NHP6AYPR052C CAT8P39113 1433 aa7.42□□□□□ -1.22
NHP6AYPR052C SAS10Q12136 610 aaPredicted RBP7.36□□□□□ -1.23
NHP6AYPR052C SEC7P11075 2009 aaKnown RBP7.35□□□□□ -1.23
NHP6AYPR052C YMR196WQ04336 1088 aa7.35□□□□□ -1.23
NHP6AYPR052C IFH1P39520 1085 aa7.33□□□□□ -1.24
NHP6AYPR052C CKB1P43639 278 aa7.31□□□□□ -1.24
NHP6AYPR052C YSP2Q06681 1438 aa7.3□□□□□ -1.24
NHP6AYPR052C HAP1P0CE41 1502 aa7.3□□□□□ -1.24
NHP6AYPR052C TY1B-NL2Q99337 1749 aaKnown RBP7.27□□□□□ -1.25
NHP6AYPR052C GEA1P47102 1408 aaPredicted RBP7.27□□□□□ -1.25
NHP6AYPR052C THI12P42883 340 aa7.25□□□□□ -1.25
NHP6AYPR052C THI5P43534 340 aa7.25□□□□□ -1.25
NHP6AYPR052C THI11P47183 340 aa7.25□□□□□ -1.25
NHP6AYPR052C THI13Q07748 340 aa7.25□□□□□ -1.25
NHP6AYPR052C USO1P25386 1790 aa7.25□□□□□ -1.25
NHP6AYPR052C YBT1P32386 1661 aa7.22□□□□□ -1.25
NHP6AYPR052C IPL1P38991 367 aa7.21□□□□□ -1.26
NHP6AYPR052C YAH1Q12184 172 aaKnown RBP7.19□□□□□ -1.26
NHP6AYPR052C IML1P47170 1584 aa7.19□□□□□ -1.26
NHP6AYPR052C SRB8P25648 1427 aa7.18□□□□□ -1.26
NHP6AYPR052C NUP188P52593 1655 aaKnown RBP7.16□□□□□ -1.26
NHP6AYPR052C GLN1P32288 370 aaKnown RBP7.16□□□□□ -1.26
NHP6AYPR052C VMR1P38735 1592 aa7.16□□□□□ -1.26
NHP6AYPR052C BUD21Q08492 214 aaPredicted RBP7.13□□□□□ -1.27
NHP6AYPR052C PRI1P10363 409 aa7.11□□□□□ -1.27
NHP6AYPR052C YIL055CP40523 627 aaKnown RBP7.11□□□□□ -1.27
NHP6AYPR052C TYS1P36421 394 aaKnown RBP7.08□□□□□ -1.28
NHP6AYPR052C IKI3Q06706 1349 aaKnown RBP7.05□□□□□ -1.28
NHP6AYPR052C PTP3P40048 928 aa7.03□□□□□ -1.28
NHP6AYPR052C APP1P53933 587 aa7.03□□□□□ -1.28
NHP6AYPR052C YMR074CQ04773 145 aa7.03□□□□□ -1.28
NHP6AYPR052C BCK1Q01389 1478 aa7.02□□□□□ -1.29
NHP6AYPR052C MRX12P47084 519 aa7.01□□□□□ -1.29
NHP6AYPR052C PDR11P40550 1411 aa7□□□□□ -1.29
NHP6AYPR052C PDR5P33302 1511 aaKnown RBP6.99□□□□□ -1.29
NHP6AYPR052C CFT1Q06632 1357 aaKnown RBP6.98□□□□□ -1.29
NHP6AYPR052C SSM4P40318 1319 aa6.98□□□□□ -1.29
NHP6AYPR052C RIA1P53893 1110 aa6.96□□□□□ -1.3
NHP6AYPR052C KRE5P22023 1365 aa6.95□□□□□ -1.3
NHP6AYPR052C REB1P21538 810 aa6.94□□□□□ -1.3
NHP6AYPR052C YNR029CP53729 429 aaKnown RBP6.94□□□□□ -1.3
NHP6AYPR052C IMH1Q06704 911 aaKnown RBP6.92□□□□□ -1.3
NHP6AYPR052C ENT1Q12518 454 aa6.92□□□□□ -1.3
NHP6AYPR052C UBP1P25037 809 aa6.9□□□□□ -1.3
NHP6AYPR052C BUD31P25337 157 aaPredicted RBP6.9□□□□□ -1.3
NHP6AYPR052C ENV9Q08651 330 aa6.9□□□□□ -1.3
NHP6AYPR052C EDE1P34216 1381 aa6.86□□□□□ -1.31
NHP6AYPR052C GCN2P15442 1659 aa6.85□□□□□ -1.31
NHP6AYPR052C YRF1-2P40105 1681 aa6.84□□□□□ -1.32
NHP6AYPR052C LEU3P08638 886 aa6.83□□□□□ -1.32
NHP6AYPR052C PAF1P38351 445 aa6.83□□□□□ -1.32
NHP6AYPR052C NAP1P25293 417 aaKnown RBP6.82□□□□□ -1.32
NHP6AYPR052C GTT3P39996 337 aa6.82□□□□□ -1.32
NHP6AYPR052C SSA1P10591 642 aaKnown RBP6.81□□□□□ -1.32
NHP6AYPR052C UGA2P38067 497 aa6.81□□□□□ -1.32
NHP6AYPR052C NUP192P47054 1683 aa6.8□□□□□ -1.32
NHP6AYPR052C CAB1Q04430 367 aa6.79□□□□□ -1.32
NHP6AYPR052C PRP45P28004 379 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms