RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W TY2B-LR1P0C2J3 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-FP0CX63 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-GR2P0CX64 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-CP25384 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-DR2Q03494 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY1B-DR1Q03855 1755 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-DR3Q07791 1770 aaKnown RBP5.08□□□□□ -1.6
SRO7YPR032W TY2B-OR1Q12113 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-DR1Q12472 1770 aa5.08□□□□□ -1.6
SRO7YPR032W TY2B-OR2Q12501 1770 aa5.08□□□□□ -1.6
SRO7YPR032W SAS10Q12136 610 aaPredicted RBP5.08□□□□□ -1.6
SRO7YPR032W YGR130CP53278 816 aa5.08□□□□□ -1.6
SRO7YPR032W RTT106P40161 455 aa5.08□□□□□ -1.6
SRO7YPR032W RPO31P04051 1460 aa5.07□□□□□ -1.6
SRO7YPR032W RPC31P17890 251 aa5.07□□□□□ -1.6
SRO7YPR032W EAF7P53911 425 aaKnown RBP5.07□□□□□ -1.6
SRO7YPR032W TY2B-BQ12491 1770 aa5.07□□□□□ -1.6
SRO7YPR032W EDE1P34216 1381 aa5.07□□□□□ -1.6
SRO7YPR032W ABP1P15891 592 aaKnown RBP5.06□□□□□ -1.6
SRO7YPR032W GDB1Q06625 1536 aa5.06□□□□□ -1.6
SRO7YPR032W ROX1P25042 368 aa5.05□□□□□ -1.6
SRO7YPR032W LEO1P38439 464 aa5.05□□□□□ -1.6
SRO7YPR032W VPS15P22219 1454 aa5.05□□□□□ -1.6
SRO7YPR032W ARO1P08566 1588 aaKnown RBP5.04□□□□□ -1.6
SRO7YPR032W TY3B-IQ7LHG5 1498 aaKnown RBP5.04□□□□□ -1.6
SRO7YPR032W MTC1P47018 478 aaKnown RBP5.03□□□□□ -1.6
SRO7YPR032W FPR3P38911 411 aaKnown RBP5.03□□□□□ -1.6
SRO7YPR032W PSD2P53037 1138 aaKnown RBP5.03□□□□□ -1.6
SRO7YPR032W PAF1P38351 445 aa5.02□□□□□ -1.61
SRO7YPR032W DNF2Q12675 1612 aa5.01□□□□□ -1.61
SRO7YPR032W NUG1P40010 520 aaKnown RBP5.01□□□□□ -1.61
SRO7YPR032W GEA2P39993 1459 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-HO13535 1793 aa5□□□□□ -1.61
SRO7YPR032W TY1B-DR5P0C2I2 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-DR6P0C2I3 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-LR2P0C2I5 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-LR3P0C2I6 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-PR1P0C2I9 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-PR2P0C2J0 1756 aa5□□□□□ -1.61
SRO7YPR032W TY1B-PR3P0C2J1 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-JR1P47098 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-ML2Q03434 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-ER1Q03612 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-ML1Q04711 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W TY1B-GR2Q12269 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-OLQ12273 1755 aa5□□□□□ -1.61
SRO7YPR032W TY1B-PLQ12414 1755 aaKnown RBP5□□□□□ -1.61
SRO7YPR032W SLN1P39928 1220 aaPredicted RBP5□□□□□ -1.61
SRO7YPR032W NUP157P40064 1391 aaKnown RBP4.99□□□□□ -1.61
SRO7YPR032W NOT3P06102 836 aaKnown RBP4.99□□□□□ -1.61
SRO7YPR032W CWC22P53333 577 aaKnown RBP4.98□□□□□ -1.61
SRO7YPR032W TRM3Q07527 1436 aa4.98□□□□□ -1.61
SRO7YPR032W PDR12Q02785 1511 aa4.97□□□□□ -1.61
SRO7YPR032W RPP0P05317 312 aaKnown RBP4.97□□□□□ -1.61
SRO7YPR032W SPT21P35209 758 aa4.96□□□□□ -1.62
SRO7YPR032W RIX1P38883 763 aaPredicted RBP4.96□□□□□ -1.62
SRO7YPR032W SNT2P53127 1403 aa4.95□□□□□ -1.62
SRO7YPR032W CTR9P89105 1077 aa4.95□□□□□ -1.62
SRO7YPR032W AIM44Q99299 758 aa4.95□□□□□ -1.62
SRO7YPR032W SNF2P22082 1703 aa4.95□□□□□ -1.62
SRO7YPR032W TY1B-BRQ12193 1756 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-GR3Q12316 1755 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-ORQ92393 1755 aa4.94□□□□□ -1.62
SRO7YPR032W PCT1P13259 424 aa4.94□□□□□ -1.62
SRO7YPR032W IOC4Q04213 475 aa4.94□□□□□ -1.62
SRO7YPR032W LEU3P08638 886 aa4.94□□□□□ -1.62
SRO7YPR032W ENV11P53246 860 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-JR2P47100 1755 aaKnown RBP4.94□□□□□ -1.62
SRO7YPR032W TY1B-ER2Q03619 1755 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-MR1Q04214 1755 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-MR2Q04670 1755 aaKnown RBP4.94□□□□□ -1.62
SRO7YPR032W TY1B-LR1Q12088 1755 aaKnown RBP4.94□□□□□ -1.62
SRO7YPR032W TY1B-NL1Q12112 1755 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-GR1Q12141 1755 aa4.94□□□□□ -1.62
SRO7YPR032W TY1B-BLQ12490 1755 aa4.94□□□□□ -1.62
SRO7YPR032W NOP58Q12499 511 aaKnown RBP4.93□□□□□ -1.62
SRO7YPR032W HAP1P0CE41 1502 aa4.93□□□□□ -1.62
SRO7YPR032W CAT8P39113 1433 aa4.92□□□□□ -1.62
SRO7YPR032W CDC45Q08032 650 aa4.92□□□□□ -1.62
SRO7YPR032W MSP1P28737 362 aa4.92□□□□□ -1.62
SRO7YPR032W KNS1P32350 737 aaPredicted RBP4.92□□□□□ -1.62
SRO7YPR032W LSP1Q12230 341 aaKnown RBP4.92□□□□□ -1.62
SRO7YPR032W YOR093CQ12275 1648 aa4.91□□□□□ -1.62
SRO7YPR032W SPC110P32380 944 aa4.91□□□□□ -1.62
SRO7YPR032W DOP1Q03921 1698 aa4.91□□□□□ -1.62
SRO7YPR032W NAP1P25293 417 aaKnown RBP4.91□□□□□ -1.62
SRO7YPR032W CHZ1P40019 153 aaPredicted RBP4.9□□□□□ -1.62
SRO7YPR032W VTH1P40438 1549 aa4.9□□□□□ -1.62
SRO7YPR032W VTH2P40890 1549 aa4.9□□□□□ -1.62
SRO7YPR032W VPS27P40343 622 aaKnown RBP4.9□□□□□ -1.63
SRO7YPR032W SMC3P47037 1230 aa4.9□□□□□ -1.63
SRO7YPR032W RVB2Q12464 471 aaKnown RBP4.89□□□□□ -1.63
SRO7YPR032W IQG1Q12280 1495 aa4.89□□□□□ -1.63
SRO7YPR032W VPS24P36095 224 aaKnown RBP4.89□□□□□ -1.63
SRO7YPR032W DIP2Q12220 943 aaPredicted RBP4.89□□□□□ -1.63
SRO7YPR032W RPO21P04050 1733 aaKnown RBP4.89□□□□□ -1.63
SRO7YPR032W RPN1P38764 993 aaKnown RBP4.88□□□□□ -1.63
SRO7YPR032W FUN12P39730 1002 aaKnown RBP4.88□□□□□ -1.63
SRO7YPR032W YRB30P53107 440 aaPredicted RBP4.88□□□□□ -1.63
SRO7YPR032W NST1P53935 1240 aa4.88□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms