RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C TY1B-GR1Q12141 1755 aa15.16■□□□□ 0.02
PUP1YOR157C TY1B-BLQ12490 1755 aa15.16■□□□□ 0.02
PUP1YOR157C NTE1Q04958 1679 aa15.14■□□□□ 0.01
PUP1YOR157C SPP41P38904 1435 aa15.09■□□□□ 0.01
PUP1YOR157C RPO21P04050 1733 aaKnown RBP15.05■□□□□ -0
PUP1YOR157C POL1P13382 1468 aa15.04■□□□□ -0
PUP1YOR157C SMC4Q12267 1418 aa15.01□□□□□ -0.01
PUP1YOR157C VTH1P40438 1549 aa14.99□□□□□ -0.01
PUP1YOR157C VTH2P40890 1549 aa14.99□□□□□ -0.01
PUP1YOR157C YOR1P53049 1477 aa14.99□□□□□ -0.01
PUP1YOR157C TSC11P40061 1430 aa14.99□□□□□ -0.01
PUP1YOR157C NUP170P38181 1502 aa14.95□□□□□ -0.02
PUP1YOR157C STU1P38198 1513 aa14.94□□□□□ -0.02
PUP1YOR157C YOR093CQ12275 1648 aa14.89□□□□□ -0.03
PUP1YOR157C SPO14P36126 1683 aa14.86□□□□□ -0.03
PUP1YOR157C DOP1Q03921 1698 aa14.86□□□□□ -0.03
PUP1YOR157C SNT2P53127 1403 aa14.82□□□□□ -0.04
PUP1YOR157C MYO4P32492 1471 aa14.8□□□□□ -0.04
PUP1YOR157C ULS1Q08562 1619 aa14.8□□□□□ -0.04
PUP1YOR157C SNQ2P32568 1501 aaKnown RBP14.75□□□□□ -0.05
PUP1YOR157C MET10P39692 1035 aa14.72□□□□□ -0.05
PUP1YOR157C PDR12Q02785 1511 aa14.59□□□□□ -0.07
PUP1YOR157C PDR10P51533 1564 aa14.59□□□□□ -0.07
PUP1YOR157C TRM3Q07527 1436 aa14.58□□□□□ -0.08
PUP1YOR157C IQG1Q12280 1495 aa14.56□□□□□ -0.08
PUP1YOR157C RTT106P40161 455 aa14.52□□□□□ -0.09
PUP1YOR157C GDB1Q06625 1536 aa14.51□□□□□ -0.09
PUP1YOR157C STH1P32597 1359 aa14.49□□□□□ -0.09
PUP1YOR157C PDR15Q04182 1529 aaKnown RBP14.47□□□□□ -0.09
PUP1YOR157C NUP157P40064 1391 aaKnown RBP14.47□□□□□ -0.09
PUP1YOR157C YTA7P40340 1379 aa14.45□□□□□ -0.1
PUP1YOR157C DNF3Q12674 1656 aa14.43□□□□□ -0.1
PUP1YOR157C ARO1P08566 1588 aaKnown RBP14.42□□□□□ -0.1
PUP1YOR157C MLP2P40457 1679 aa14.42□□□□□ -0.1
PUP1YOR157C BUD3P25558 1636 aa14.39□□□□□ -0.11
PUP1YOR157C CHC1P22137 1653 aaKnown RBP14.39□□□□□ -0.11
PUP1YOR157C YAP3P38749 330 aa14.18□□□□□ -0.14
PUP1YOR157C USO1P25386 1790 aa14.17□□□□□ -0.14
PUP1YOR157C MAK10Q02197 733 aa14.15□□□□□ -0.14
PUP1YOR157C SEC7P11075 2009 aaKnown RBP14.11□□□□□ -0.15
PUP1YOR157C TY3B-GQ99315 1547 aa14.1□□□□□ -0.15
PUP1YOR157C YSP2Q06681 1438 aa14.08□□□□□ -0.15
PUP1YOR157C BNR1P40450 1375 aa14.04□□□□□ -0.16
PUP1YOR157C SAS10Q12136 610 aaPredicted RBP13.96□□□□□ -0.17
PUP1YOR157C IFH1P39520 1085 aa13.95□□□□□ -0.18
PUP1YOR157C YBT1P32386 1661 aa13.91□□□□□ -0.18
PUP1YOR157C THI12P42883 340 aa13.89□□□□□ -0.19
PUP1YOR157C THI5P43534 340 aa13.89□□□□□ -0.19
PUP1YOR157C CKB1P43639 278 aa13.89□□□□□ -0.19
PUP1YOR157C THI11P47183 340 aa13.89□□□□□ -0.19
PUP1YOR157C THI13Q07748 340 aa13.89□□□□□ -0.19
PUP1YOR157C CAT8P39113 1433 aa13.88□□□□□ -0.19
PUP1YOR157C URN1Q06525 465 aaKnown RBP13.83□□□□□ -0.2
PUP1YOR157C YMR196WQ04336 1088 aa13.79□□□□□ -0.2
PUP1YOR157C IML1P47170 1584 aa13.79□□□□□ -0.2
PUP1YOR157C GLN1P32288 370 aaKnown RBP13.77□□□□□ -0.21
PUP1YOR157C GEA1P47102 1408 aaPredicted RBP13.77□□□□□ -0.21
PUP1YOR157C TAF7Q05021 590 aa13.77□□□□□ -0.21
PUP1YOR157C TY1B-NL2Q99337 1749 aaKnown RBP13.76□□□□□ -0.21
PUP1YOR157C NUP188P52593 1655 aaKnown RBP13.75□□□□□ -0.21
PUP1YOR157C HAP1P0CE41 1502 aa13.68□□□□□ -0.22
PUP1YOR157C IPL1P38991 367 aa13.67□□□□□ -0.22
PUP1YOR157C VMR1P38735 1592 aa13.63□□□□□ -0.23
PUP1YOR157C YAH1Q12184 172 aaKnown RBP13.63□□□□□ -0.23
PUP1YOR157C TYS1P36421 394 aaKnown RBP13.62□□□□□ -0.23
PUP1YOR157C APP1P53933 587 aa13.59□□□□□ -0.23
PUP1YOR157C YIL055CP40523 627 aaKnown RBP13.56□□□□□ -0.24
PUP1YOR157C SRB8P25648 1427 aa13.47□□□□□ -0.25
PUP1YOR157C PRI1P10363 409 aa13.43□□□□□ -0.26
PUP1YOR157C PDR5P33302 1511 aaKnown RBP13.42□□□□□ -0.26
PUP1YOR157C PTP3P40048 928 aa13.4□□□□□ -0.26
PUP1YOR157C BUD21Q08492 214 aaPredicted RBP13.39□□□□□ -0.27
PUP1YOR157C YMR074CQ04773 145 aa13.35□□□□□ -0.27
PUP1YOR157C BCK1Q01389 1478 aa13.31□□□□□ -0.28
PUP1YOR157C REB1P21538 810 aa13.29□□□□□ -0.28
PUP1YOR157C KRE5P22023 1365 aa13.29□□□□□ -0.28
PUP1YOR157C PDR11P40550 1411 aa13.29□□□□□ -0.28
PUP1YOR157C RIA1P53893 1110 aa13.24□□□□□ -0.29
PUP1YOR157C ENT1Q12518 454 aa13.22□□□□□ -0.29
PUP1YOR157C CFT1Q06632 1357 aaKnown RBP13.21□□□□□ -0.29
PUP1YOR157C YNR029CP53729 429 aaKnown RBP13.19□□□□□ -0.3
PUP1YOR157C ENV9Q08651 330 aa13.18□□□□□ -0.3
PUP1YOR157C BUD31P25337 157 aaPredicted RBP13.17□□□□□ -0.3
PUP1YOR157C MRX12P47084 519 aa13.17□□□□□ -0.3
PUP1YOR157C IMH1Q06704 911 aaKnown RBP13.12□□□□□ -0.31
PUP1YOR157C GCN2P15442 1659 aa13.08□□□□□ -0.31
PUP1YOR157C YRF1-2P40105 1681 aa13.06□□□□□ -0.32
PUP1YOR157C TY3B-IQ7LHG5 1498 aaKnown RBP13.03□□□□□ -0.32
PUP1YOR157C RRP5Q05022 1729 aaKnown RBP12.99□□□□□ -0.33
PUP1YOR157C NUP192P47054 1683 aa12.97□□□□□ -0.33
PUP1YOR157C CAB1Q04430 367 aa12.94□□□□□ -0.34
PUP1YOR157C SSA1P10591 642 aaKnown RBP12.91□□□□□ -0.34
PUP1YOR157C YBL086CP38177 466 aa12.91□□□□□ -0.34
PUP1YOR157C UBP1P25037 809 aa12.89□□□□□ -0.35
PUP1YOR157C RAD9P14737 1309 aa12.88□□□□□ -0.35
PUP1YOR157C PRP45P28004 379 aaPredicted RBP12.87□□□□□ -0.35
PUP1YOR157C LEU3P08638 886 aa12.85□□□□□ -0.35
PUP1YOR157C RPN11P43588 306 aaKnown RBP12.85□□□□□ -0.35
PUP1YOR157C RRD1P40454 393 aaKnown RBP12.81□□□□□ -0.36
PUP1YOR157C ALD4P46367 519 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms