RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C TY1B-ML1Q04711 1755 aaKnown RBP7.18□□□□□ -1.26
RAT1YOR048C TY1B-GR2Q12269 1755 aa7.18□□□□□ -1.26
RAT1YOR048C TY1B-OLQ12273 1755 aa7.18□□□□□ -1.26
RAT1YOR048C TY1B-PLQ12414 1755 aaKnown RBP7.18□□□□□ -1.26
RAT1YOR048C ESC1Q03661 1658 aaKnown RBP7.18□□□□□ -1.26
RAT1YOR048C VTH1P40438 1549 aa7.18□□□□□ -1.26
RAT1YOR048C VTH2P40890 1549 aa7.18□□□□□ -1.26
RAT1YOR048C GDB1Q06625 1536 aa7.17□□□□□ -1.26
RAT1YOR048C TY1B-BRQ12193 1756 aa7.17□□□□□ -1.26
RAT1YOR048C TY1B-GR3Q12316 1755 aa7.17□□□□□ -1.26
RAT1YOR048C TY1B-ORQ92393 1755 aa7.17□□□□□ -1.26
RAT1YOR048C DNF1P32660 1571 aa7.16□□□□□ -1.26
RAT1YOR048C NST1P53935 1240 aa7.15□□□□□ -1.26
RAT1YOR048C BUD3P25558 1636 aa7.14□□□□□ -1.27
RAT1YOR048C PRS1P32895 427 aaKnown RBP7.14□□□□□ -1.27
RAT1YOR048C SNT2P53127 1403 aa7.11□□□□□ -1.27
RAT1YOR048C YBT1P32386 1661 aa7.11□□□□□ -1.27
RAT1YOR048C CDC25P04821 1589 aa7.1□□□□□ -1.27
RAT1YOR048C ARO1P08566 1588 aaKnown RBP7.1□□□□□ -1.27
RAT1YOR048C TY1B-JR2P47100 1755 aaKnown RBP7.1□□□□□ -1.27
RAT1YOR048C TY1B-ER2Q03619 1755 aa7.1□□□□□ -1.27
RAT1YOR048C TY1B-MR1Q04214 1755 aa7.1□□□□□ -1.27
RAT1YOR048C TY1B-MR2Q04670 1755 aaKnown RBP7.1□□□□□ -1.27
RAT1YOR048C TY1B-LR1Q12088 1755 aaKnown RBP7.1□□□□□ -1.27
RAT1YOR048C TY1B-NL1Q12112 1755 aa7.1□□□□□ -1.27
RAT1YOR048C TY1B-GR1Q12141 1755 aa7.1□□□□□ -1.27
RAT1YOR048C TY1B-BLQ12490 1755 aa7.1□□□□□ -1.27
RAT1YOR048C CFT1Q06632 1357 aaKnown RBP7.09□□□□□ -1.27
RAT1YOR048C BUD21Q08492 214 aaPredicted RBP7.08□□□□□ -1.28
RAT1YOR048C NOP7P53261 605 aaKnown RBP7.08□□□□□ -1.28
RAT1YOR048C IQG1Q12280 1495 aa7.07□□□□□ -1.28
RAT1YOR048C GEA2P39993 1459 aaKnown RBP7.04□□□□□ -1.28
RAT1YOR048C SRB8P25648 1427 aa7.03□□□□□ -1.28
RAT1YOR048C TAF5P38129 798 aa7.02□□□□□ -1.29
RAT1YOR048C SEC3P33332 1336 aaKnown RBP7.01□□□□□ -1.29
RAT1YOR048C NUP157P40064 1391 aaKnown RBP7□□□□□ -1.29
RAT1YOR048C IRC20Q06554 1556 aa6.99□□□□□ -1.29
RAT1YOR048C KIP3P53086 805 aaKnown RBP6.98□□□□□ -1.29
RAT1YOR048C MET10P39692 1035 aa6.98□□□□□ -1.29
RAT1YOR048C NUP159P40477 1460 aa6.97□□□□□ -1.29
RAT1YOR048C PDS5Q04264 1277 aa6.97□□□□□ -1.29
RAT1YOR048C RPA190P10964 1664 aaKnown RBP6.97□□□□□ -1.29
RAT1YOR048C BFR2Q06631 534 aaKnown RBP6.96□□□□□ -1.29
RAT1YOR048C NTE1Q04958 1679 aa6.96□□□□□ -1.29
RAT1YOR048C CAT8P39113 1433 aa6.95□□□□□ -1.3
RAT1YOR048C YSP2Q06681 1438 aa6.94□□□□□ -1.3
RAT1YOR048C RPO21P04050 1733 aaKnown RBP6.94□□□□□ -1.3
RAT1YOR048C SPO14P36126 1683 aa6.94□□□□□ -1.3
RAT1YOR048C YPR148CQ06523 435 aa6.93□□□□□ -1.3
RAT1YOR048C PAF1P38351 445 aa6.93□□□□□ -1.3
RAT1YOR048C PDR11P40550 1411 aa6.92□□□□□ -1.3
RAT1YOR048C YFR016CP43597 1233 aaKnown RBP6.92□□□□□ -1.3
RAT1YOR048C MHP1P43638 1398 aa6.92□□□□□ -1.3
RAT1YOR048C LTE1P07866 1435 aa6.89□□□□□ -1.31
RAT1YOR048C GCN2P15442 1659 aa6.89□□□□□ -1.31
RAT1YOR048C RTG3P38165 486 aa6.89□□□□□ -1.31
RAT1YOR048C YRF1-1P0CX20 1796 aa6.88□□□□□ -1.31
RAT1YOR048C YRF1-5P0CX21 1796 aa6.88□□□□□ -1.31
RAT1YOR048C YRF1-8P0CX22 1796 aa6.88□□□□□ -1.31
RAT1YOR048C RPC31P17890 251 aa6.87□□□□□ -1.31
RAT1YOR048C RVB2Q12464 471 aaKnown RBP6.87□□□□□ -1.31
RAT1YOR048C YLR419WQ06698 1435 aaKnown RBP6.86□□□□□ -1.31
RAT1YOR048C TRK1P12685 1235 aa6.86□□□□□ -1.31
RAT1YOR048C PDR12Q02785 1511 aa6.86□□□□□ -1.31
RAT1YOR048C BNR1P40450 1375 aa6.86□□□□□ -1.31
RAT1YOR048C DRS2P39524 1355 aa6.85□□□□□ -1.31
RAT1YOR048C PDR5P33302 1511 aaKnown RBP6.85□□□□□ -1.31
RAT1YOR048C TYS1P36421 394 aaKnown RBP6.83□□□□□ -1.32
RAT1YOR048C SPE2P21182 396 aa6.82□□□□□ -1.32
RAT1YOR048C YAP3P38749 330 aa6.82□□□□□ -1.32
RAT1YOR048C YDL144CQ07589 356 aa6.82□□□□□ -1.32
RAT1YOR048C CHZ1P40019 153 aaPredicted RBP6.81□□□□□ -1.32
RAT1YOR048C MPP10P47083 593 aaKnown RBP6.81□□□□□ -1.32
RAT1YOR048C TAF8Q03750 510 aa6.81□□□□□ -1.32
RAT1YOR048C IME2P32581 645 aa6.8□□□□□ -1.32
RAT1YOR048C YEF3P16521 1044 aaKnown RBP6.79□□□□□ -1.32
RAT1YOR048C YOR093CQ12275 1648 aa6.79□□□□□ -1.32
RAT1YOR048C SUI2P20459 304 aaKnown RBP6.79□□□□□ -1.32
RAT1YOR048C OPY1P38271 328 aa6.79□□□□□ -1.32
RAT1YOR048C RTC1Q08281 1341 aa6.79□□□□□ -1.32
RAT1YOR048C RAD9P14737 1309 aa6.77□□□□□ -1.33
RAT1YOR048C MMS1Q06211 1407 aa6.77□□□□□ -1.33
RAT1YOR048C RAV1P47104 1357 aa6.77□□□□□ -1.33
RAT1YOR048C CAB1Q04430 367 aa6.77□□□□□ -1.33
RAT1YOR048C VMR1P38735 1592 aa6.77□□□□□ -1.33
RAT1YOR048C ESL2P36168 1195 aa6.76□□□□□ -1.33
RAT1YOR048C TY3B-IQ7LHG5 1498 aaKnown RBP6.75□□□□□ -1.33
RAT1YOR048C DJP1P40564 432 aa6.75□□□□□ -1.33
RAT1YOR048C DOP1Q03921 1698 aa6.75□□□□□ -1.33
RAT1YOR048C DAL5P15365 543 aa6.75□□□□□ -1.33
RAT1YOR048C NUP192P47054 1683 aa6.74□□□□□ -1.33
RAT1YOR048C RRP46P53256 223 aaPredicted RBP6.74□□□□□ -1.33
RAT1YOR048C CSE4P36012 229 aa6.74□□□□□ -1.33
RAT1YOR048C VPS27P40343 622 aaKnown RBP6.73□□□□□ -1.33
RAT1YOR048C TFA1P36100 482 aa6.73□□□□□ -1.33
RAT1YOR048C YRB30P53107 440 aaPredicted RBP6.71□□□□□ -1.33
RAT1YOR048C SEC7P11075 2009 aaKnown RBP6.71□□□□□ -1.33
RAT1YOR048C FPR3P38911 411 aaKnown RBP6.71□□□□□ -1.34
RAT1YOR048C CDC45Q08032 650 aa6.71□□□□□ -1.34
RAT1YOR048C MLP1Q02455 1875 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms