RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeastyeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT8YOL048C TY1B-ER2Q03619 1755 aa13.01□□□□□ -0.33
RRT8YOL048C TY1B-MR1Q04214 1755 aa13.01□□□□□ -0.33
RRT8YOL048C TY1B-MR2Q04670 1755 aaKnown RBP13.01□□□□□ -0.33
RRT8YOL048C TY1B-LR1Q12088 1755 aaKnown RBP13.01□□□□□ -0.33
RRT8YOL048C TY1B-NL1Q12112 1755 aa13.01□□□□□ -0.33
RRT8YOL048C TY1B-GR1Q12141 1755 aa13.01□□□□□ -0.33
RRT8YOL048C TY1B-BLQ12490 1755 aa13.01□□□□□ -0.33
RRT8YOL048C NTE1Q04958 1679 aa12.99□□□□□ -0.33
RRT8YOL048C ULS1Q08562 1619 aa12.98□□□□□ -0.33
RRT8YOL048C GEA1P47102 1408 aaPredicted RBP12.97□□□□□ -0.33
RRT8YOL048C GEA2P39993 1459 aaKnown RBP12.93□□□□□ -0.34
RRT8YOL048C MET10P39692 1035 aa12.93□□□□□ -0.34
RRT8YOL048C RPO21P04050 1733 aaKnown RBP12.92□□□□□ -0.34
RRT8YOL048C VPS15P22219 1454 aa12.87□□□□□ -0.35
RRT8YOL048C IKI3Q06706 1349 aaKnown RBP12.83□□□□□ -0.36
RRT8YOL048C LTE1P07866 1435 aa12.81□□□□□ -0.36
RRT8YOL048C NUP157P40064 1391 aaKnown RBP12.81□□□□□ -0.36
RRT8YOL048C YRF1-1P0CX20 1796 aa12.8□□□□□ -0.36
RRT8YOL048C YRF1-5P0CX21 1796 aa12.8□□□□□ -0.36
RRT8YOL048C YRF1-8P0CX22 1796 aa12.8□□□□□ -0.36
RRT8YOL048C IRC20Q06554 1556 aa12.78□□□□□ -0.36
RRT8YOL048C CKB1P43639 278 aa12.78□□□□□ -0.36
RRT8YOL048C CAT8P39113 1433 aa12.78□□□□□ -0.36
RRT8YOL048C TY3B-GQ99315 1547 aa12.77□□□□□ -0.37
RRT8YOL048C DIP2Q12220 943 aaPredicted RBP12.76□□□□□ -0.37
RRT8YOL048C PDR12Q02785 1511 aa12.74□□□□□ -0.37
RRT8YOL048C SPO14P36126 1683 aa12.73□□□□□ -0.37
RRT8YOL048C GDB1Q06625 1536 aa12.71□□□□□ -0.38
RRT8YOL048C PDR10P51533 1564 aa12.7□□□□□ -0.38
RRT8YOL048C PRI1P10363 409 aa12.69□□□□□ -0.38
RRT8YOL048C DRS2P39524 1355 aa12.69□□□□□ -0.38
RRT8YOL048C SSM4P40318 1319 aa12.68□□□□□ -0.38
RRT8YOL048C ITT1Q04638 464 aa12.65□□□□□ -0.38
RRT8YOL048C IQG1Q12280 1495 aa12.65□□□□□ -0.38
RRT8YOL048C YBT1P32386 1661 aa12.64□□□□□ -0.39
RRT8YOL048C NUP170P38181 1502 aa12.64□□□□□ -0.39
RRT8YOL048C SRB8P25648 1427 aa12.61□□□□□ -0.39
RRT8YOL048C ARO1P08566 1588 aaKnown RBP12.6□□□□□ -0.39
RRT8YOL048C ISW2Q08773 1120 aa12.6□□□□□ -0.39
RRT8YOL048C BUD21Q08492 214 aaPredicted RBP12.57□□□□□ -0.4
RRT8YOL048C BUD3P25558 1636 aa12.57□□□□□ -0.4
RRT8YOL048C AAD16Q02895 342 aa12.55□□□□□ -0.4
RRT8YOL048C YSP2Q06681 1438 aa12.54□□□□□ -0.4
RRT8YOL048C BNR1P40450 1375 aa12.52□□□□□ -0.41
RRT8YOL048C MMS1Q06211 1407 aa12.5□□□□□ -0.41
RRT8YOL048C TRM3Q07527 1436 aa12.48□□□□□ -0.41
RRT8YOL048C AVT3P36062 692 aa12.46□□□□□ -0.41
RRT8YOL048C BNI1P41832 1953 aa12.46□□□□□ -0.41
RRT8YOL048C RPG1P38249 964 aaKnown RBP12.43□□□□□ -0.42
RRT8YOL048C BFR2Q06631 534 aaKnown RBP12.43□□□□□ -0.42
RRT8YOL048C PRY3P47033 881 aa12.41□□□□□ -0.42
RRT8YOL048C DOP1Q03921 1698 aa12.4□□□□□ -0.42
RRT8YOL048C ABP1P15891 592 aaKnown RBP12.31□□□□□ -0.44
RRT8YOL048C CHC1P22137 1653 aaKnown RBP12.29□□□□□ -0.44
RRT8YOL048C SEC7P11075 2009 aaKnown RBP12.29□□□□□ -0.44
RRT8YOL048C PAF1P38351 445 aa12.28□□□□□ -0.44
RRT8YOL048C NOP7P53261 605 aaKnown RBP12.26□□□□□ -0.45
RRT8YOL048C URN1Q06525 465 aaKnown RBP12.26□□□□□ -0.45
RRT8YOL048C GCN2P15442 1659 aa12.22□□□□□ -0.45
RRT8YOL048C DNF2Q12675 1612 aa12.21□□□□□ -0.46
RRT8YOL048C YAP3P38749 330 aa12.19□□□□□ -0.46
RRT8YOL048C IPL1P38991 367 aa12.16□□□□□ -0.46
RRT8YOL048C TYS1P36421 394 aaKnown RBP12.15□□□□□ -0.46
RRT8YOL048C YOR093CQ12275 1648 aa12.14□□□□□ -0.47
RRT8YOL048C IML1P47170 1584 aa12.12□□□□□ -0.47
RRT8YOL048C PDR5P33302 1511 aaKnown RBP12.11□□□□□ -0.47
RRT8YOL048C NUP188P52593 1655 aaKnown RBP12.11□□□□□ -0.47
RRT8YOL048C VMR1P38735 1592 aa12.11□□□□□ -0.47
RRT8YOL048C PDR11P40550 1411 aa12.09□□□□□ -0.47
RRT8YOL048C RAV1P47104 1357 aa12.07□□□□□ -0.48
RRT8YOL048C RTC1Q08281 1341 aa12.03□□□□□ -0.48
RRT8YOL048C TAF5P38129 798 aa12.01□□□□□ -0.49
RRT8YOL048C POL5P39985 1022 aaKnown RBP12.01□□□□□ -0.49
RRT8YOL048C ORC1P54784 914 aaPredicted RBP12.01□□□□□ -0.49
RRT8YOL048C MAK10Q02197 733 aa11.98□□□□□ -0.49
RRT8YOL048C MIF2P35201 549 aa11.97□□□□□ -0.49
RRT8YOL048C TSR3Q12094 313 aaKnown RBP11.97□□□□□ -0.49
RRT8YOL048C DNF3Q12674 1656 aa11.95□□□□□ -0.5
RRT8YOL048C ESL2P36168 1195 aa11.95□□□□□ -0.5
RRT8YOL048C MRX12P47084 519 aa11.92□□□□□ -0.5
RRT8YOL048C RAD9P14737 1309 aa11.88□□□□□ -0.51
RRT8YOL048C ALD4P46367 519 aaKnown RBP11.88□□□□□ -0.51
RRT8YOL048C KIP3P53086 805 aaKnown RBP11.88□□□□□ -0.51
RRT8YOL048C CAB1Q04430 367 aa11.88□□□□□ -0.51
RRT8YOL048C RIA1P53893 1110 aa11.86□□□□□ -0.51
RRT8YOL048C KRE5P22023 1365 aa11.85□□□□□ -0.51
RRT8YOL048C NAP1P25293 417 aaKnown RBP11.85□□□□□ -0.51
RRT8YOL048C TAF8Q03750 510 aa11.85□□□□□ -0.51
RRT8YOL048C HAP1P0CE41 1502 aa11.83□□□□□ -0.52
RRT8YOL048C YCK3P39962 524 aa11.82□□□□□ -0.52
RRT8YOL048C SPE2P21182 396 aa11.8□□□□□ -0.52
RRT8YOL048C BCK1Q01389 1478 aa11.8□□□□□ -0.52
RRT8YOL048C NUP192P47054 1683 aa11.8□□□□□ -0.52
RRT8YOL048C RPL17AP05740 184 aaKnown RBP11.78□□□□□ -0.52
RRT8YOL048C RPL17BP46990 184 aaKnown RBP11.78□□□□□ -0.52
RRT8YOL048C TY3B-IQ7LHG5 1498 aaKnown RBP11.77□□□□□ -0.52
RRT8YOL048C SCT1P32784 759 aa11.75□□□□□ -0.53
RRT8YOL048C HAA1Q12753 694 aaKnown RBP11.74□□□□□ -0.53
RRT8YOL048C YLR419WQ06698 1435 aaKnown RBP11.74□□□□□ -0.53
RRT8YOL048C MHP1P43638 1398 aa11.71□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms