RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C EAP1P36041 632 aaKnown RBP6.24□□□□□ -1.41
WHI3YNL197C MIF2P35201 549 aa6.22□□□□□ -1.41
WHI3YNL197C YFR006WP43590 535 aa6.22□□□□□ -1.41
WHI3YNL197C ABP1P15891 592 aaKnown RBP6.21□□□□□ -1.42
WHI3YNL197C YOL036WQ08206 761 aa6.2□□□□□ -1.42
WHI3YNL197C RTG1P32607 177 aa6.2□□□□□ -1.42
WHI3YNL197C SET4P42948 560 aa6.19□□□□□ -1.42
WHI3YNL197C YNR021WP53723 404 aaKnown RBP6.19□□□□□ -1.42
WHI3YNL197C TRP5P00931 707 aaKnown RBP6.18□□□□□ -1.42
WHI3YNL197C PTC3P34221 468 aaKnown RBP6.18□□□□□ -1.42
WHI3YNL197C REF2P42073 533 aaPredicted RBP6.18□□□□□ -1.42
WHI3YNL197C NUP42P49686 430 aaKnown RBP6.17□□□□□ -1.42
WHI3YNL197C NCR1Q12200 1170 aa6.17□□□□□ -1.42
WHI3YNL197C MAM3Q12296 706 aa6.17□□□□□ -1.42
WHI3YNL197C IES2P40154 320 aa6.15□□□□□ -1.42
WHI3YNL197C KIN1P13185 1064 aa6.15□□□□□ -1.43
WHI3YNL197C DIT2P21595 489 aa6.15□□□□□ -1.43
WHI3YNL197C GLC3P32775 704 aa6.14□□□□□ -1.43
WHI3YNL197C SEC61P32915 480 aa6.14□□□□□ -1.43
WHI3YNL197C YNL035CP53962 389 aaKnown RBP6.14□□□□□ -1.43
WHI3YNL197C AIM7Q12156 149 aa6.13□□□□□ -1.43
WHI3YNL197C COX6P00427 148 aa6.13□□□□□ -1.43
WHI3YNL197C VMA1P17255 1071 aaKnown RBP6.11□□□□□ -1.43
WHI3YNL197C MAK21Q12176 1025 aaKnown RBP6.11□□□□□ -1.43
WHI3YNL197C SAM3Q08986 587 aa6.11□□□□□ -1.43
WHI3YNL197C YDR090CQ03193 310 aa6.1□□□□□ -1.43
WHI3YNL197C UBP14P38237 781 aaKnown RBP6.09□□□□□ -1.43
WHI3YNL197C VHR2P40041 505 aa6.06□□□□□ -1.44
WHI3YNL197C TFG1P41895 735 aaPredicted RBP6.06□□□□□ -1.44
WHI3YNL197C YLR326WQ06170 240 aaKnown RBP6.06□□□□□ -1.44
WHI3YNL197C RLF2Q12495 606 aa6.06□□□□□ -1.44
WHI3YNL197C GUA1P38625 525 aaKnown RBP6.04□□□□□ -1.44
WHI3YNL197C GUT1P32190 709 aa6.04□□□□□ -1.44
WHI3YNL197C SOL3P38858 249 aa6.03□□□□□ -1.44
WHI3YNL197C DAN4P47179 1161 aa6.03□□□□□ -1.44
WHI3YNL197C GRE2Q12068 342 aaKnown RBP6.03□□□□□ -1.44
WHI3YNL197C YGR273CP53329 174 aa6.02□□□□□ -1.45
WHI3YNL197C JIP4Q03361 876 aa6.02□□□□□ -1.45
WHI3YNL197C ATH1P48016 1211 aa6.02□□□□□ -1.45
WHI3YNL197C SAP30P38429 201 aa6.01□□□□□ -1.45
WHI3YNL197C NST1P53935 1240 aa6□□□□□ -1.45
WHI3YNL197C BCK2P33306 851 aa5.99□□□□□ -1.45
WHI3YNL197C YDL129WQ07555 291 aa5.99□□□□□ -1.45
WHI3YNL197C GYP5Q12344 894 aa5.99□□□□□ -1.45
WHI3YNL197C PCS60P38137 543 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
WHI3YNL197C ATF2P53296 535 aa5.98□□□□□ -1.45
WHI3YNL197C KEX1P09620 729 aa5.98□□□□□ -1.45
WHI3YNL197C CHL1P22516 861 aaPredicted RBP5.98□□□□□ -1.45
WHI3YNL197C HTA1P04911 132 aaKnown RBP5.97□□□□□ -1.45
WHI3YNL197C HTA2P04912 132 aa5.97□□□□□ -1.45
WHI3YNL197C HPC2Q01448 625 aa5.96□□□□□ -1.46
WHI3YNL197C PSE1P32337 1089 aaKnown RBP5.95□□□□□ -1.46
WHI3YNL197C PRE3P38624 215 aa5.95□□□□□ -1.46
WHI3YNL197C RAD54P32863 898 aa5.94□□□□□ -1.46
WHI3YNL197C DCW1P36091 449 aa5.94□□□□□ -1.46
WHI3YNL197C ORC6P38826 435 aa5.94□□□□□ -1.46
WHI3YNL197C PTC4P38089 393 aa5.93□□□□□ -1.46
WHI3YNL197C ILV3P39522 585 aaKnown RBP5.93□□□□□ -1.46
WHI3YNL197C KIC1P38692 1080 aa5.92□□□□□ -1.46
WHI3YNL197C YEL023CP39992 682 aa5.92□□□□□ -1.46
WHI3YNL197C TFB3Q03290 321 aa5.92□□□□□ -1.46
WHI3YNL197C HGH1P48362 394 aaKnown RBP5.91□□□□□ -1.46
WHI3YNL197C PKC1P24583 1151 aa5.89□□□□□ -1.47
WHI3YNL197C KTR1P27810 393 aaKnown RBP5.89□□□□□ -1.47
WHI3YNL197C AI4P03878 556 aa5.88□□□□□ -1.47
WHI3YNL197C MPH3P0CE00 602 aa5.88□□□□□ -1.47
WHI3YNL197C GAP1P19145 602 aaPredicted RBP5.87□□□□□ -1.47
WHI3YNL197C RGR1P19263 1082 aa5.87□□□□□ -1.47
WHI3YNL197C CSN12P47130 423 aa5.87□□□□□ -1.47
WHI3YNL197C SSA2P10592 639 aaKnown RBP5.86□□□□□ -1.47
WHI3YNL197C MVP1P40959 511 aaKnown RBP5.85□□□□□ -1.47
WHI3YNL197C TEA1P47988 759 aa5.85□□□□□ -1.47
WHI3YNL197C SLI15P38283 698 aa5.84□□□□□ -1.48
WHI3YNL197C BRL1P38770 471 aa5.84□□□□□ -1.48
WHI3YNL197C GLN1P32288 370 aaKnown RBP5.83□□□□□ -1.48
WHI3YNL197C XDJ1P39102 459 aa5.83□□□□□ -1.48
WHI3YNL197C VRP1P37370 817 aa5.82□□□□□ -1.48
WHI3YNL197C YDR344CQ05510 147 aa5.82□□□□□ -1.48
WHI3YNL197C PML39Q03760 334 aa5.82□□□□□ -1.48
WHI3YNL197C NIS1P53939 407 aa5.81□□□□□ -1.48
WHI3YNL197C TYW1Q08960 810 aaKnown RBP5.81□□□□□ -1.48
WHI3YNL197C ELP4Q02884 456 aaKnown RBP5.8□□□□□ -1.48
WHI3YNL197C CLB5P30283 435 aa5.79□□□□□ -1.48
WHI3YNL197C BIM1P40013 344 aa5.79□□□□□ -1.48
WHI3YNL197C ATG32P40458 529 aa5.78□□□□□ -1.48
WHI3YNL197C YJL007CP47080 104 aa5.78□□□□□ -1.48
WHI3YNL197C FPK1P53739 893 aa5.78□□□□□ -1.48
WHI3YNL197C CSC1Q06538 782 aa5.78□□□□□ -1.48
WHI3YNL197C HST2P53686 357 aa5.77□□□□□ -1.49
WHI3YNL197C CDC73Q06697 393 aa5.77□□□□□ -1.49
WHI3YNL197C YPR109WQ06104 294 aa5.75□□□□□ -1.49
WHI3YNL197C SIT4P20604 311 aa5.75□□□□□ -1.49
WHI3YNL197C BIO2P32451 375 aa5.75□□□□□ -1.49
WHI3YNL197C ARH1P48360 493 aa5.75□□□□□ -1.49
WHI3YNL197C SUB2Q07478 446 aaKnown RBP5.75□□□□□ -1.49
WHI3YNL197C SCJ1P25303 377 aa5.74□□□□□ -1.49
WHI3YNL197C TFB4Q12004 338 aa5.74□□□□□ -1.49
WHI3YNL197C TIF1P10081 395 aaKnown RBP5.73□□□□□ -1.49
WHI3YNL197C DPS1P04802 557 aaKnown RBP5.73□□□□□ -1.49
WHI3YNL197C ERG12P07277 443 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms