RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C GLN1P32288 370 aaKnown RBP7.73□□□□□ -1.17
MRE11YMR224C PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
MRE11YMR224C YJL007CP47080 104 aa7.71□□□□□ -1.17
MRE11YMR224C CSN12P47130 423 aa7.71□□□□□ -1.17
MRE11YMR224C YDR090CQ03193 310 aa7.71□□□□□ -1.17
MRE11YMR224C DBP1P24784 617 aaKnown RBP7.71□□□□□ -1.18
MRE11YMR224C SSA4P22202 642 aaKnown RBP7.69□□□□□ -1.18
MRE11YMR224C ATG32P40458 529 aa7.69□□□□□ -1.18
MRE11YMR224C YFR006WP43590 535 aa7.69□□□□□ -1.18
MRE11YMR224C UBP14P38237 781 aaKnown RBP7.68□□□□□ -1.18
MRE11YMR224C VHR2P40041 505 aa7.67□□□□□ -1.18
MRE11YMR224C PSE1P32337 1089 aaKnown RBP7.66□□□□□ -1.18
MRE11YMR224C NAP1P25293 417 aaKnown RBP7.65□□□□□ -1.18
MRE11YMR224C MRX12P47084 519 aa7.63□□□□□ -1.19
MRE11YMR224C YLR326WQ06170 240 aaKnown RBP7.63□□□□□ -1.19
MRE11YMR224C TIF1P10081 395 aaKnown RBP7.63□□□□□ -1.19
MRE11YMR224C UBP10P53874 792 aaPredicted RBP7.63□□□□□ -1.19
MRE11YMR224C YCK3P39962 524 aa7.62□□□□□ -1.19
MRE11YMR224C SLD2P34252 453 aa7.61□□□□□ -1.19
MRE11YMR224C MAP2P38174 421 aaKnown RBP7.61□□□□□ -1.19
MRE11YMR224C RPL34BP40525 121 aaKnown RBP7.61□□□□□ -1.19
MRE11YMR224C NOP7P53261 605 aaKnown RBP7.61□□□□□ -1.19
MRE11YMR224C ERG12P07277 443 aa7.6□□□□□ -1.19
MRE11YMR224C KTR1P27810 393 aaKnown RBP7.6□□□□□ -1.19
MRE11YMR224C KIC1P38692 1080 aa7.6□□□□□ -1.19
MRE11YMR224C YOR238WQ08634 303 aa7.6□□□□□ -1.19
MRE11YMR224C CPS1P27614 576 aa7.58□□□□□ -1.2
MRE11YMR224C HAA1Q12753 694 aaKnown RBP7.58□□□□□ -1.2
MRE11YMR224C SLX5P32828 619 aaKnown RBP7.57□□□□□ -1.2
MRE11YMR224C TTI1P36097 1038 aa7.57□□□□□ -1.2
MRE11YMR224C RPL34AP87262 121 aaPredicted RBP7.57□□□□□ -1.2
MRE11YMR224C YBL036CP38197 257 aa7.56□□□□□ -1.2
MRE11YMR224C TEA1P47988 759 aa7.56□□□□□ -1.2
MRE11YMR224C SNU71P53207 620 aaKnown RBP7.56□□□□□ -1.2
MRE11YMR224C CDC3P32457 520 aaKnown RBP7.55□□□□□ -1.2
MRE11YMR224C NOB1Q08444 459 aaKnown RBP7.55□□□□□ -1.2
MRE11YMR224C IOC4Q04213 475 aa7.55□□□□□ -1.2
MRE11YMR224C BIO2P32451 375 aa7.54□□□□□ -1.2
MRE11YMR224C RAD54P32863 898 aa7.54□□□□□ -1.2
MRE11YMR224C PCS60P38137 543 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
MRE11YMR224C ATH1P48016 1211 aa7.54□□□□□ -1.2
MRE11YMR224C TYW1Q08960 810 aaKnown RBP7.54□□□□□ -1.2
MRE11YMR224C YPR204WQ08995 1032 aa7.54□□□□□ -1.2
MRE11YMR224C GUT1P32190 709 aa7.53□□□□□ -1.2
MRE11YMR224C RTG2P32608 588 aaKnown RBP7.53□□□□□ -1.2
MRE11YMR224C YGR273CP53329 174 aa7.52□□□□□ -1.21
MRE11YMR224C SSF1P38789 453 aaPredicted RBP7.51□□□□□ -1.21
MRE11YMR224C KEX1P09620 729 aa7.51□□□□□ -1.21
MRE11YMR224C ORC6P38826 435 aa7.51□□□□□ -1.21
MRE11YMR224C GRE2Q12068 342 aaKnown RBP7.51□□□□□ -1.21
MRE11YMR224C VMA1P17255 1071 aaKnown RBP7.5□□□□□ -1.21
MRE11YMR224C SEN54Q02825 467 aaPredicted RBP7.5□□□□□ -1.21
MRE11YMR224C CSE4P36012 229 aa7.49□□□□□ -1.21
MRE11YMR224C HEM3P28789 327 aa7.48□□□□□ -1.21
MRE11YMR224C PAM1P37304 830 aaKnown RBP7.48□□□□□ -1.21
MRE11YMR224C YNL108CP53929 270 aa7.48□□□□□ -1.21
MRE11YMR224C RGR1P19263 1082 aa7.47□□□□□ -1.21
MRE11YMR224C CLB5P30283 435 aa7.46□□□□□ -1.22
MRE11YMR224C RRN6P32786 894 aa7.46□□□□□ -1.22
MRE11YMR224C MET10P39692 1035 aa7.46□□□□□ -1.22
MRE11YMR224C HST2P53686 357 aa7.46□□□□□ -1.22
MRE11YMR224C SUP45P12385 437 aaKnown RBP7.45□□□□□ -1.22
MRE11YMR224C PUP1P25043 261 aa7.45□□□□□ -1.22
MRE11YMR224C SOL3P38858 249 aa7.45□□□□□ -1.22
MRE11YMR224C PIB1Q06651 286 aa7.45□□□□□ -1.22
MRE11YMR224C RAD59Q12223 238 aa7.45□□□□□ -1.22
MRE11YMR224C NSR1P27476 414 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
MRE11YMR224C YML083CQ04526 418 aa7.45□□□□□ -1.22
MRE11YMR224C NIS1P53939 407 aa7.44□□□□□ -1.22
MRE11YMR224C HAT1Q12341 374 aa7.44□□□□□ -1.22
MRE11YMR224C FPK1P53739 893 aa7.43□□□□□ -1.22
MRE11YMR224C PKH3Q03306 898 aaPredicted RBP7.43□□□□□ -1.22
MRE11YMR224C SIS2P36024 562 aa7.42□□□□□ -1.22
MRE11YMR224C MVP1P40959 511 aaKnown RBP7.42□□□□□ -1.22
MRE11YMR224C MMP1Q12372 583 aa7.42□□□□□ -1.22
MRE11YMR224C YAP5P40574 245 aa7.4□□□□□ -1.22
MRE11YMR224C YMR196WQ04336 1088 aa7.4□□□□□ -1.22
MRE11YMR224C ENO1P00924 437 aaKnown RBP7.4□□□□□ -1.23
MRE11YMR224C ESS1P22696 170 aa7.4□□□□□ -1.23
MRE11YMR224C MRX10Q05648 414 aa7.4□□□□□ -1.23
MRE11YMR224C SAM3Q08986 587 aa7.4□□□□□ -1.23
MRE11YMR224C ENO2P00925 437 aaKnown RBP7.39□□□□□ -1.23
MRE11YMR224C SCJ1P25303 377 aa7.38□□□□□ -1.23
MRE11YMR224C GAP1P19145 602 aaPredicted RBP7.37□□□□□ -1.23
MRE11YMR224C YDJ1P25491 409 aaKnown RBP7.37□□□□□ -1.23
MRE11YMR224C SPT5P27692 1063 aaKnown RBP7.37□□□□□ -1.23
MRE11YMR224C YJU3P28321 313 aa7.37□□□□□ -1.23
MRE11YMR224C NST1P53935 1240 aa7.37□□□□□ -1.23
MRE11YMR224C TGL4P36165 910 aa7.36□□□□□ -1.23
MRE11YMR224C GYP5Q12344 894 aa7.36□□□□□ -1.23
MRE11YMR224C ARG8P18544 423 aa7.35□□□□□ -1.23
MRE11YMR224C RIM21P48565 533 aa7.35□□□□□ -1.23
MRE11YMR224C SIT4P20604 311 aa7.34□□□□□ -1.23
MRE11YMR224C YGL015CP33199 130 aa7.34□□□□□ -1.23
MRE11YMR224C STM1P39015 273 aaKnown RBP7.34□□□□□ -1.23
MRE11YMR224C YPR109WQ06104 294 aa7.34□□□□□ -1.23
MRE11YMR224C ASF1P32447 279 aa7.33□□□□□ -1.24
MRE11YMR224C CSC1Q06538 782 aa7.33□□□□□ -1.24
MRE11YMR224C IPL1P38991 367 aa7.32□□□□□ -1.24
MRE11YMR224C MAK16P10962 306 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms