RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C TY2B-BQ12491 1770 aa15.86■□□□□ 0.13
BDF1YLR399C RPC31P17890 251 aa15.83■□□□□ 0.12
BDF1YLR399C MDS3P53094 1487 aa15.83■□□□□ 0.12
BDF1YLR399C OPY1P38271 328 aa15.8■□□□□ 0.12
BDF1YLR399C NOP7P53261 605 aaKnown RBP15.79■□□□□ 0.12
BDF1YLR399C YBT1P32386 1661 aa15.78■□□□□ 0.12
BDF1YLR399C ESC1Q03661 1658 aaKnown RBP15.74■□□□□ 0.11
BDF1YLR399C RQC2Q12532 1038 aaKnown RBP15.74■□□□□ 0.11
BDF1YLR399C VTH1P40438 1549 aa15.71■□□□□ 0.11
BDF1YLR399C VTH2P40890 1549 aa15.71■□□□□ 0.11
BDF1YLR399C SNT2P53127 1403 aa15.71■□□□□ 0.11
BDF1YLR399C EAF7P53911 425 aaKnown RBP15.69■□□□□ 0.1
BDF1YLR399C GCN2P15442 1659 aa15.66■□□□□ 0.1
BDF1YLR399C TY1B-HO13535 1793 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-DR5P0C2I2 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-DR6P0C2I3 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-LR2P0C2I5 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-LR3P0C2I6 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C TY1B-PR1P0C2I9 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C TY1B-PR2P0C2J0 1756 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-PR3P0C2J1 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C TY1B-JR1P47098 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-ML2Q03434 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C TY1B-ER1Q03612 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-ML1Q04711 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C TY1B-GR2Q12269 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-OLQ12273 1755 aa15.65■□□□□ 0.1
BDF1YLR399C TY1B-PLQ12414 1755 aaKnown RBP15.65■□□□□ 0.1
BDF1YLR399C NST1P53935 1240 aa15.64■□□□□ 0.09
BDF1YLR399C PDS5Q04264 1277 aa15.63■□□□□ 0.09
BDF1YLR399C CAT8P39113 1433 aa15.61■□□□□ 0.09
BDF1YLR399C TCB2P48231 1178 aa15.6■□□□□ 0.09
BDF1YLR399C IRC20Q06554 1556 aa15.59■□□□□ 0.09
BDF1YLR399C GDB1Q06625 1536 aa15.58■□□□□ 0.08
BDF1YLR399C GEA2P39993 1459 aaKnown RBP15.57■□□□□ 0.08
BDF1YLR399C MNN4P36044 1178 aa15.56■□□□□ 0.08
BDF1YLR399C CKB1P43639 278 aa15.56■□□□□ 0.08
BDF1YLR399C TY1B-BRQ12193 1756 aa15.54■□□□□ 0.08
BDF1YLR399C TY1B-GR3Q12316 1755 aa15.54■□□□□ 0.08
BDF1YLR399C TY1B-ORQ92393 1755 aa15.54■□□□□ 0.08
BDF1YLR399C PDR5P33302 1511 aaKnown RBP15.54■□□□□ 0.08
BDF1YLR399C ARO1P08566 1588 aaKnown RBP15.53■□□□□ 0.08
BDF1YLR399C FPR3P38911 411 aaKnown RBP15.52■□□□□ 0.08
BDF1YLR399C SNF7P39929 240 aaKnown RBP15.52■□□□□ 0.08
BDF1YLR399C BUD21Q08492 214 aaPredicted RBP15.49■□□□□ 0.07
BDF1YLR399C RVB2Q12464 471 aaKnown RBP15.49■□□□□ 0.07
BDF1YLR399C IQG1Q12280 1495 aa15.48■□□□□ 0.07
BDF1YLR399C CDC45Q08032 650 aa15.47■□□□□ 0.07
BDF1YLR399C TY1B-JR2P47100 1755 aaKnown RBP15.47■□□□□ 0.07
BDF1YLR399C TY1B-ER2Q03619 1755 aa15.47■□□□□ 0.07
BDF1YLR399C TY1B-MR1Q04214 1755 aa15.47■□□□□ 0.07
BDF1YLR399C TY1B-MR2Q04670 1755 aaKnown RBP15.47■□□□□ 0.07
BDF1YLR399C TY1B-LR1Q12088 1755 aaKnown RBP15.47■□□□□ 0.07
BDF1YLR399C TY1B-NL1Q12112 1755 aa15.47■□□□□ 0.07
BDF1YLR399C TY1B-GR1Q12141 1755 aa15.47■□□□□ 0.07
BDF1YLR399C TY1B-BLQ12490 1755 aa15.47■□□□□ 0.07
BDF1YLR399C PAF1P38351 445 aa15.46■□□□□ 0.07
BDF1YLR399C VPS27P40343 622 aaKnown RBP15.45■□□□□ 0.06
BDF1YLR399C TY3B-IQ7LHG5 1498 aaKnown RBP15.44■□□□□ 0.06
BDF1YLR399C LEO1P38439 464 aa15.42■□□□□ 0.06
BDF1YLR399C YIR014WP40570 242 aa15.4■□□□□ 0.06
BDF1YLR399C ROX1P25042 368 aa15.39■□□□□ 0.05
BDF1YLR399C MMS1Q06211 1407 aa15.39■□□□□ 0.05
BDF1YLR399C RPP0P05317 312 aaKnown RBP15.39■□□□□ 0.05
BDF1YLR399C SIS2P36024 562 aa15.39■□□□□ 0.05
BDF1YLR399C ABP1P15891 592 aaKnown RBP15.37■□□□□ 0.05
BDF1YLR399C TAF5P38129 798 aa15.34■□□□□ 0.05
BDF1YLR399C CDC25P04821 1589 aa15.34■□□□□ 0.05
BDF1YLR399C PDR12Q02785 1511 aa15.33■□□□□ 0.05
BDF1YLR399C DJP1P40564 432 aa15.32■□□□□ 0.04
BDF1YLR399C KIP3P53086 805 aaKnown RBP15.32■□□□□ 0.04
BDF1YLR399C YDL144CQ07589 356 aa15.29■□□□□ 0.04
BDF1YLR399C BUD3P25558 1636 aa15.29■□□□□ 0.04
BDF1YLR399C SLN1P39928 1220 aaPredicted RBP15.28■□□□□ 0.04
BDF1YLR399C PCT1P13259 424 aa15.27■□□□□ 0.03
BDF1YLR399C LTE1P07866 1435 aa15.27■□□□□ 0.03
BDF1YLR399C YRB30P53107 440 aaPredicted RBP15.24■□□□□ 0.03
BDF1YLR399C SUI2P20459 304 aaKnown RBP15.23■□□□□ 0.03
BDF1YLR399C NTE1Q04958 1679 aa15.21■□□□□ 0.02
BDF1YLR399C NUP157P40064 1391 aaKnown RBP15.2■□□□□ 0.02
BDF1YLR399C YOR093CQ12275 1648 aa15.19■□□□□ 0.02
BDF1YLR399C YSP2Q06681 1438 aa15.19■□□□□ 0.02
BDF1YLR399C RPO21P04050 1733 aaKnown RBP15.19■□□□□ 0.02
BDF1YLR399C RTC1Q08281 1341 aa15.18■□□□□ 0.02
BDF1YLR399C RAV1P47104 1357 aa15.16■□□□□ 0.02
BDF1YLR399C RTG3P38165 486 aa15.14■□□□□ 0.01
BDF1YLR399C AIM44Q99299 758 aa15.14■□□□□ 0.01
BDF1YLR399C VPS24P36095 224 aaKnown RBP15.13■□□□□ 0.01
BDF1YLR399C ESL2P36168 1195 aa15.12■□□□□ 0.01
BDF1YLR399C DNF2Q12675 1612 aa15.12■□□□□ 0.01
BDF1YLR399C MSP1P28737 362 aa15.12■□□□□ 0.01
BDF1YLR399C MPP10P47083 593 aaKnown RBP15.12■□□□□ 0.01
BDF1YLR399C CTR9P89105 1077 aa15.12■□□□□ 0.01
BDF1YLR399C SPO14P36126 1683 aa15.11■□□□□ 0.01
BDF1YLR399C DRS2P39524 1355 aa15.11■□□□□ 0.01
BDF1YLR399C TRK1P12685 1235 aa15.11■□□□□ 0.01
BDF1YLR399C NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.11■□□□□ 0.01not detected
BDF1YLR399C PDR11P40550 1411 aa15.09■□□□□ 0.01
BDF1YLR399C MET10P39692 1035 aa15.07■□□□□ 0
BDF1YLR399C ARL1P38116 183 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms