RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W NTE1Q04958 1679 aa9.61□□□□□ -0.87
SSP120YLR250W MMS1Q06211 1407 aa9.6□□□□□ -0.87
SSP120YLR250W VPS15P22219 1454 aa9.59□□□□□ -0.87
SSP120YLR250W ABP1P15891 592 aaKnown RBP9.58□□□□□ -0.88
SSP120YLR250W VTH1P40438 1549 aa9.56□□□□□ -0.88
SSP120YLR250W VTH2P40890 1549 aa9.56□□□□□ -0.88
SSP120YLR250W RPO21P04050 1733 aaKnown RBP9.56□□□□□ -0.88
SSP120YLR250W TSC11P40061 1430 aa9.56□□□□□ -0.88
SSP120YLR250W DRS2P39524 1355 aa9.53□□□□□ -0.88
SSP120YLR250W IRC20Q06554 1556 aa9.5□□□□□ -0.89
SSP120YLR250W YFR006WP43590 535 aa9.48□□□□□ -0.89
SSP120YLR250W MYO4P32492 1471 aa9.45□□□□□ -0.9
SSP120YLR250W SNQ2P32568 1501 aaKnown RBP9.44□□□□□ -0.9
SSP120YLR250W DNF2Q12675 1612 aa9.44□□□□□ -0.9
SSP120YLR250W NUP170P38181 1502 aa9.41□□□□□ -0.9
SSP120YLR250W SNT2P53127 1403 aa9.4□□□□□ -0.9
SSP120YLR250W SPO14P36126 1683 aa9.39□□□□□ -0.91
SSP120YLR250W ULS1Q08562 1619 aa9.36□□□□□ -0.91
SSP120YLR250W DOP1Q03921 1698 aa9.36□□□□□ -0.91
SSP120YLR250W MET10P39692 1035 aa9.32□□□□□ -0.92
SSP120YLR250W YTA7P40340 1379 aa9.31□□□□□ -0.92
SSP120YLR250W PDR12Q02785 1511 aa9.28□□□□□ -0.92
SSP120YLR250W STH1P32597 1359 aa9.27□□□□□ -0.93
SSP120YLR250W GDB1Q06625 1536 aa9.26□□□□□ -0.93
SSP120YLR250W RTT106P40161 455 aa9.25□□□□□ -0.93
SSP120YLR250W MLP2P40457 1679 aa9.24□□□□□ -0.93
SSP120YLR250W IQG1Q12280 1495 aa9.23□□□□□ -0.93
SSP120YLR250W NUP157P40064 1391 aaKnown RBP9.23□□□□□ -0.93
SSP120YLR250W PDR10P51533 1564 aa9.21□□□□□ -0.93
SSP120YLR250W YOR093CQ12275 1648 aa9.21□□□□□ -0.93
SSP120YLR250W PDR15Q04182 1529 aaKnown RBP9.19□□□□□ -0.94
SSP120YLR250W TRM3Q07527 1436 aa9.17□□□□□ -0.94
SSP120YLR250W ARO1P08566 1588 aaKnown RBP9.15□□□□□ -0.95
SSP120YLR250W SAS10Q12136 610 aaPredicted RBP9.12□□□□□ -0.95
SSP120YLR250W CHC1P22137 1653 aaKnown RBP9.11□□□□□ -0.95
SSP120YLR250W BUD3P25558 1636 aa9.09□□□□□ -0.95
SSP120YLR250W IFH1P39520 1085 aa9.06□□□□□ -0.96
SSP120YLR250W DNF3Q12674 1656 aa9.06□□□□□ -0.96
SSP120YLR250W YBT1P32386 1661 aa9□□□□□ -0.97
SSP120YLR250W TY3B-GQ99315 1547 aa9□□□□□ -0.97
SSP120YLR250W SEC7P11075 2009 aaKnown RBP8.98□□□□□ -0.97
SSP120YLR250W GEA1P47102 1408 aaPredicted RBP8.97□□□□□ -0.97
SSP120YLR250W YSP2Q06681 1438 aa8.95□□□□□ -0.98
SSP120YLR250W CAT8P39113 1433 aa8.94□□□□□ -0.98
SSP120YLR250W CKB1P43639 278 aa8.93□□□□□ -0.98
SSP120YLR250W YAP3P38749 330 aa8.92□□□□□ -0.98
SSP120YLR250W TAF7Q05021 590 aa8.92□□□□□ -0.98
SSP120YLR250W BNR1P40450 1375 aa8.9□□□□□ -0.98
SSP120YLR250W USO1P25386 1790 aa8.89□□□□□ -0.99
SSP120YLR250W MAK10Q02197 733 aa8.86□□□□□ -0.99
SSP120YLR250W IML1P47170 1584 aa8.76□□□□□ -1.01
SSP120YLR250W SRB8P25648 1427 aa8.72□□□□□ -1.01
SSP120YLR250W URN1Q06525 465 aaKnown RBP8.72□□□□□ -1.01
SSP120YLR250W TYS1P36421 394 aaKnown RBP8.71□□□□□ -1.02
SSP120YLR250W NUP188P52593 1655 aaKnown RBP8.71□□□□□ -1.02
SSP120YLR250W IPL1P38991 367 aa8.7□□□□□ -1.02
SSP120YLR250W THI12P42883 340 aa8.7□□□□□ -1.02
SSP120YLR250W THI5P43534 340 aa8.7□□□□□ -1.02
SSP120YLR250W THI11P47183 340 aa8.7□□□□□ -1.02
SSP120YLR250W THI13Q07748 340 aa8.7□□□□□ -1.02
SSP120YLR250W VMR1P38735 1592 aa8.69□□□□□ -1.02
SSP120YLR250W BUD21Q08492 214 aaPredicted RBP8.65□□□□□ -1.02
SSP120YLR250W TY1B-NL2Q99337 1749 aaKnown RBP8.64□□□□□ -1.03
SSP120YLR250W PDR5P33302 1511 aaKnown RBP8.63□□□□□ -1.03
SSP120YLR250W HAP1P0CE41 1502 aa8.61□□□□□ -1.03
SSP120YLR250W YMR196WQ04336 1088 aa8.6□□□□□ -1.03
SSP120YLR250W PDR11P40550 1411 aa8.53□□□□□ -1.04
SSP120YLR250W KRE5P22023 1365 aa8.49□□□□□ -1.05
SSP120YLR250W APP1P53933 587 aa8.49□□□□□ -1.05
SSP120YLR250W GLN1P32288 370 aaKnown RBP8.47□□□□□ -1.05
SSP120YLR250W YAH1Q12184 172 aaKnown RBP8.46□□□□□ -1.06
SSP120YLR250W SSM4P40318 1319 aa8.45□□□□□ -1.06
SSP120YLR250W RIA1P53893 1110 aa8.44□□□□□ -1.06
SSP120YLR250W CFT1Q06632 1357 aaKnown RBP8.42□□□□□ -1.06
SSP120YLR250W PTP3P40048 928 aa8.41□□□□□ -1.06
SSP120YLR250W IKI3Q06706 1349 aaKnown RBP8.4□□□□□ -1.06
SSP120YLR250W YIL055CP40523 627 aaKnown RBP8.4□□□□□ -1.06
SSP120YLR250W MRX12P47084 519 aa8.39□□□□□ -1.07
SSP120YLR250W YNR029CP53729 429 aaKnown RBP8.39□□□□□ -1.07
SSP120YLR250W GCN2P15442 1659 aa8.38□□□□□ -1.07
SSP120YLR250W BCK1Q01389 1478 aa8.36□□□□□ -1.07
SSP120YLR250W REB1P21538 810 aa8.35□□□□□ -1.07
SSP120YLR250W NUP192P47054 1683 aa8.34□□□□□ -1.07
SSP120YLR250W TY3B-IQ7LHG5 1498 aaKnown RBP8.33□□□□□ -1.08
SSP120YLR250W CAB1Q04430 367 aa8.33□□□□□ -1.08
SSP120YLR250W RAD9P14737 1309 aa8.31□□□□□ -1.08
SSP120YLR250W ENT1Q12518 454 aa8.3□□□□□ -1.08
SSP120YLR250W RAV1P47104 1357 aa8.28□□□□□ -1.08
SSP120YLR250W YMR074CQ04773 145 aa8.27□□□□□ -1.09
SSP120YLR250W ENV9Q08651 330 aa8.27□□□□□ -1.09
SSP120YLR250W ALD4P46367 519 aaKnown RBP8.25□□□□□ -1.09
SSP120YLR250W RRP5Q05022 1729 aaKnown RBP8.23□□□□□ -1.09
SSP120YLR250W PRI1P10363 409 aa8.22□□□□□ -1.09
SSP120YLR250W YRF1-2P40105 1681 aa8.21□□□□□ -1.09
SSP120YLR250W FAP1P53971 965 aa8.21□□□□□ -1.1
SSP120YLR250W IMH1Q06704 911 aaKnown RBP8.21□□□□□ -1.1
SSP120YLR250W PAF1P38351 445 aa8.2□□□□□ -1.1
SSP120YLR250W RTC1Q08281 1341 aa8.2□□□□□ -1.1
SSP120YLR250W BUD31P25337 157 aaPredicted RBP8.19□□□□□ -1.1
SSP120YLR250W BFR2Q06631 534 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms