RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeastyeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM1YLR180W TY1B-MR1Q04214 1755 aa16.17■□□□□ 0.18
SAM1YLR180W TY1B-MR2Q04670 1755 aaKnown RBP16.17■□□□□ 0.18
SAM1YLR180W TY1B-LR1Q12088 1755 aaKnown RBP16.17■□□□□ 0.18
SAM1YLR180W TY1B-NL1Q12112 1755 aa16.17■□□□□ 0.18
SAM1YLR180W TY1B-GR1Q12141 1755 aa16.17■□□□□ 0.18
SAM1YLR180W TY1B-BLQ12490 1755 aa16.17■□□□□ 0.18
SAM1YLR180W STU1P38198 1513 aa16.15■□□□□ 0.18
SAM1YLR180W TSC11P40061 1430 aa16.15■□□□□ 0.18
SAM1YLR180W VTH1P40438 1549 aa16.12■□□□□ 0.17
SAM1YLR180W VTH2P40890 1549 aa16.12■□□□□ 0.17
SAM1YLR180W RPO21P04050 1733 aaKnown RBP16.09■□□□□ 0.17
SAM1YLR180W DNF2Q12675 1612 aa16.08■□□□□ 0.16
SAM1YLR180W MYO4P32492 1471 aa15.99■□□□□ 0.15
SAM1YLR180W NUP170P38181 1502 aa15.99■□□□□ 0.15
SAM1YLR180W SNT2P53127 1403 aa15.94■□□□□ 0.14
SAM1YLR180W SPO14P36126 1683 aa15.87■□□□□ 0.13
SAM1YLR180W SNQ2P32568 1501 aaKnown RBP15.87■□□□□ 0.13
SAM1YLR180W MET10P39692 1035 aa15.85■□□□□ 0.13
SAM1YLR180W ULS1Q08562 1619 aa15.84■□□□□ 0.13
SAM1YLR180W YOR093CQ12275 1648 aa15.78■□□□□ 0.12
SAM1YLR180W DOP1Q03921 1698 aa15.76■□□□□ 0.11
SAM1YLR180W STH1P32597 1359 aa15.75■□□□□ 0.11
SAM1YLR180W PDR12Q02785 1511 aa15.71■□□□□ 0.11
SAM1YLR180W YTA7P40340 1379 aa15.71■□□□□ 0.11
SAM1YLR180W RTT106P40161 455 aa15.7■□□□□ 0.1
SAM1YLR180W TRM3Q07527 1436 aa15.69■□□□□ 0.1
SAM1YLR180W IQG1Q12280 1495 aa15.65■□□□□ 0.1
SAM1YLR180W PDR10P51533 1564 aa15.65■□□□□ 0.1
SAM1YLR180W GDB1Q06625 1536 aa15.61■□□□□ 0.09
SAM1YLR180W NUP157P40064 1391 aaKnown RBP15.57■□□□□ 0.08
SAM1YLR180W MLP2P40457 1679 aa15.55■□□□□ 0.08
SAM1YLR180W BUD3P25558 1636 aa15.53■□□□□ 0.08
SAM1YLR180W PDR15Q04182 1529 aaKnown RBP15.47■□□□□ 0.07
SAM1YLR180W ARO1P08566 1588 aaKnown RBP15.41■□□□□ 0.06
SAM1YLR180W CHC1P22137 1653 aaKnown RBP15.4■□□□□ 0.06
SAM1YLR180W DNF3Q12674 1656 aa15.37■□□□□ 0.05
SAM1YLR180W YAP3P38749 330 aa15.22■□□□□ 0.03
SAM1YLR180W SAS10Q12136 610 aaPredicted RBP15.2■□□□□ 0.02
SAM1YLR180W TY3B-GQ99315 1547 aa15.13■□□□□ 0.01
SAM1YLR180W IFH1P39520 1085 aa15.13■□□□□ 0.01
SAM1YLR180W MAK10Q02197 733 aa15.13■□□□□ 0.01
SAM1YLR180W TAF7Q05021 590 aa15.13■□□□□ 0.01
SAM1YLR180W SEC7P11075 2009 aaKnown RBP15.12■□□□□ 0.01
SAM1YLR180W CAT8P39113 1433 aa15.1■□□□□ 0.01
SAM1YLR180W BNR1P40450 1375 aa15.07■□□□□ 0
SAM1YLR180W YSP2Q06681 1438 aa15.03■□□□□ -0
SAM1YLR180W CKB1P43639 278 aa15.02■□□□□ -0
SAM1YLR180W YBT1P32386 1661 aa15□□□□□ -0.01
SAM1YLR180W URN1Q06525 465 aaKnown RBP14.99□□□□□ -0.01
SAM1YLR180W GEA1P47102 1408 aaPredicted RBP14.99□□□□□ -0.01
SAM1YLR180W USO1P25386 1790 aa14.97□□□□□ -0.01
SAM1YLR180W YMR196WQ04336 1088 aa14.82□□□□□ -0.04
SAM1YLR180W THI12P42883 340 aa14.81□□□□□ -0.04
SAM1YLR180W THI5P43534 340 aa14.81□□□□□ -0.04
SAM1YLR180W THI11P47183 340 aa14.81□□□□□ -0.04
SAM1YLR180W THI13Q07748 340 aa14.81□□□□□ -0.04
SAM1YLR180W IML1P47170 1584 aa14.77□□□□□ -0.05
SAM1YLR180W TY1B-NL2Q99337 1749 aaKnown RBP14.75□□□□□ -0.05
SAM1YLR180W IPL1P38991 367 aa14.74□□□□□ -0.05
SAM1YLR180W HAP1P0CE41 1502 aa14.73□□□□□ -0.05
SAM1YLR180W NUP188P52593 1655 aaKnown RBP14.71□□□□□ -0.06
SAM1YLR180W SRB8P25648 1427 aa14.67□□□□□ -0.06
SAM1YLR180W VMR1P38735 1592 aa14.64□□□□□ -0.07
SAM1YLR180W TYS1P36421 394 aaKnown RBP14.63□□□□□ -0.07
SAM1YLR180W BUD21Q08492 214 aaPredicted RBP14.58□□□□□ -0.08
SAM1YLR180W GLN1P32288 370 aaKnown RBP14.56□□□□□ -0.08
SAM1YLR180W YAH1Q12184 172 aaKnown RBP14.55□□□□□ -0.08
SAM1YLR180W PDR5P33302 1511 aaKnown RBP14.45□□□□□ -0.1
SAM1YLR180W YIL055CP40523 627 aaKnown RBP14.42□□□□□ -0.1
SAM1YLR180W APP1P53933 587 aa14.42□□□□□ -0.1
SAM1YLR180W PTP3P40048 928 aa14.34□□□□□ -0.11
SAM1YLR180W KRE5P22023 1365 aa14.29□□□□□ -0.12
SAM1YLR180W PRI1P10363 409 aa14.28□□□□□ -0.12
SAM1YLR180W RIA1P53893 1110 aa14.26□□□□□ -0.13
SAM1YLR180W BCK1Q01389 1478 aa14.25□□□□□ -0.13
SAM1YLR180W CFT1Q06632 1357 aaKnown RBP14.25□□□□□ -0.13
SAM1YLR180W MRX12P47084 519 aa14.25□□□□□ -0.13
SAM1YLR180W PDR11P40550 1411 aa14.23□□□□□ -0.13
SAM1YLR180W YMR074CQ04773 145 aa14.21□□□□□ -0.13
SAM1YLR180W YNR029CP53729 429 aaKnown RBP14.2□□□□□ -0.14
SAM1YLR180W REB1P21538 810 aa14.19□□□□□ -0.14
SAM1YLR180W ENT1Q12518 454 aa14.14□□□□□ -0.15
SAM1YLR180W ENV9Q08651 330 aa14.09□□□□□ -0.15
SAM1YLR180W GCN2P15442 1659 aa14.08□□□□□ -0.16
SAM1YLR180W IMH1Q06704 911 aaKnown RBP14.04□□□□□ -0.16
SAM1YLR180W BUD31P25337 157 aaPredicted RBP14.02□□□□□ -0.17
SAM1YLR180W NUP192P47054 1683 aa13.99□□□□□ -0.17
SAM1YLR180W TY3B-IQ7LHG5 1498 aaKnown RBP13.99□□□□□ -0.17
SAM1YLR180W IKI3Q06706 1349 aaKnown RBP13.98□□□□□ -0.17
SAM1YLR180W CAB1Q04430 367 aa13.98□□□□□ -0.17
SAM1YLR180W YRF1-2P40105 1681 aa13.95□□□□□ -0.18
SAM1YLR180W RAD9P14737 1309 aa13.91□□□□□ -0.18
SAM1YLR180W SSM4P40318 1319 aa13.9□□□□□ -0.18
SAM1YLR180W RAV1P47104 1357 aa13.89□□□□□ -0.19
SAM1YLR180W ALD4P46367 519 aaKnown RBP13.89□□□□□ -0.19
SAM1YLR180W RRP5Q05022 1729 aaKnown RBP13.88□□□□□ -0.19
SAM1YLR180W PAF1P38351 445 aa13.85□□□□□ -0.19
SAM1YLR180W PRP45P28004 379 aaPredicted RBP13.84□□□□□ -0.19
SAM1YLR180W UBP1P25037 809 aa13.83□□□□□ -0.2
SAM1YLR180W LEU3P08638 886 aa13.81□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms