RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C TY1B-NL1Q12112 1755 aa13.86□□□□□ -0.19
BUD20YLR074C TY1B-GR1Q12141 1755 aa13.86□□□□□ -0.19
BUD20YLR074C TY1B-BLQ12490 1755 aa13.86□□□□□ -0.19
BUD20YLR074C SMC4Q12267 1418 aa13.85□□□□□ -0.19
BUD20YLR074C POL1P13382 1468 aa13.84□□□□□ -0.19
BUD20YLR074C TSC11P40061 1430 aa13.82□□□□□ -0.2
BUD20YLR074C NTE1Q04958 1679 aa13.82□□□□□ -0.2
BUD20YLR074C YOR1P53049 1477 aa13.78□□□□□ -0.2
BUD20YLR074C RPO21P04050 1733 aaKnown RBP13.77□□□□□ -0.21
BUD20YLR074C VTH1P40438 1549 aa13.76□□□□□ -0.21
BUD20YLR074C VTH2P40890 1549 aa13.76□□□□□ -0.21
BUD20YLR074C NUP170P38181 1502 aa13.74□□□□□ -0.21
BUD20YLR074C SNT2P53127 1403 aa13.71□□□□□ -0.22
BUD20YLR074C YOR093CQ12275 1648 aa13.71□□□□□ -0.22
BUD20YLR074C STU1P38198 1513 aa13.7□□□□□ -0.22
BUD20YLR074C MET10P39692 1035 aa13.66□□□□□ -0.22
BUD20YLR074C MYO4P32492 1471 aa13.64□□□□□ -0.23
BUD20YLR074C SPO14P36126 1683 aa13.6□□□□□ -0.23
BUD20YLR074C ULS1Q08562 1619 aa13.56□□□□□ -0.24
BUD20YLR074C DOP1Q03921 1698 aa13.55□□□□□ -0.24
BUD20YLR074C SNQ2P32568 1501 aaKnown RBP13.54□□□□□ -0.24
BUD20YLR074C TRM3Q07527 1436 aa13.47□□□□□ -0.25
BUD20YLR074C PDR12Q02785 1511 aa13.45□□□□□ -0.26
BUD20YLR074C RTT106P40161 455 aa13.43□□□□□ -0.26
BUD20YLR074C IQG1Q12280 1495 aa13.42□□□□□ -0.26
BUD20YLR074C PDR10P51533 1564 aa13.42□□□□□ -0.26
BUD20YLR074C STH1P32597 1359 aa13.42□□□□□ -0.26
BUD20YLR074C GDB1Q06625 1536 aa13.35□□□□□ -0.27
BUD20YLR074C NUP157P40064 1391 aaKnown RBP13.33□□□□□ -0.27
BUD20YLR074C YTA7P40340 1379 aa13.33□□□□□ -0.27
BUD20YLR074C PDR15Q04182 1529 aaKnown RBP13.33□□□□□ -0.28
BUD20YLR074C BUD3P25558 1636 aa13.28□□□□□ -0.28
BUD20YLR074C DNF3Q12674 1656 aa13.24□□□□□ -0.29
BUD20YLR074C ARO1P08566 1588 aaKnown RBP13.24□□□□□ -0.29
BUD20YLR074C YAP3P38749 330 aa13.18□□□□□ -0.3
BUD20YLR074C MLP2P40457 1679 aa13.18□□□□□ -0.3
BUD20YLR074C CHC1P22137 1653 aaKnown RBP13.15□□□□□ -0.3
BUD20YLR074C MAK10Q02197 733 aa13.13□□□□□ -0.31
BUD20YLR074C TY3B-GQ99315 1547 aa13.03□□□□□ -0.32
BUD20YLR074C BNR1P40450 1375 aa13.01□□□□□ -0.33
BUD20YLR074C SEC7P11075 2009 aaKnown RBP13.01□□□□□ -0.33
BUD20YLR074C YSP2Q06681 1438 aa12.94□□□□□ -0.34
BUD20YLR074C USO1P25386 1790 aa12.93□□□□□ -0.34
BUD20YLR074C URN1Q06525 465 aaKnown RBP12.88□□□□□ -0.35
BUD20YLR074C THI12P42883 340 aa12.85□□□□□ -0.35
BUD20YLR074C THI5P43534 340 aa12.85□□□□□ -0.35
BUD20YLR074C THI11P47183 340 aa12.85□□□□□ -0.35
BUD20YLR074C THI13Q07748 340 aa12.85□□□□□ -0.35
BUD20YLR074C YMR196WQ04336 1088 aa12.84□□□□□ -0.35
BUD20YLR074C IFH1P39520 1085 aa12.82□□□□□ -0.36
BUD20YLR074C SAS10Q12136 610 aaPredicted RBP12.82□□□□□ -0.36
BUD20YLR074C CAT8P39113 1433 aa12.81□□□□□ -0.36
BUD20YLR074C CKB1P43639 278 aa12.8□□□□□ -0.36
BUD20YLR074C GLN1P32288 370 aaKnown RBP12.79□□□□□ -0.36
BUD20YLR074C TAF7Q05021 590 aa12.78□□□□□ -0.36
BUD20YLR074C YAH1Q12184 172 aaKnown RBP12.69□□□□□ -0.38
BUD20YLR074C TY1B-NL2Q99337 1749 aaKnown RBP12.68□□□□□ -0.38
BUD20YLR074C IPL1P38991 367 aa12.68□□□□□ -0.38
BUD20YLR074C YBT1P32386 1661 aa12.67□□□□□ -0.38
BUD20YLR074C GEA1P47102 1408 aaPredicted RBP12.65□□□□□ -0.38
BUD20YLR074C HAP1P0CE41 1502 aa12.63□□□□□ -0.39
BUD20YLR074C IML1P47170 1584 aa12.62□□□□□ -0.39
BUD20YLR074C NUP188P52593 1655 aaKnown RBP12.59□□□□□ -0.39
BUD20YLR074C YIL055CP40523 627 aaKnown RBP12.59□□□□□ -0.39
BUD20YLR074C TYS1P36421 394 aaKnown RBP12.57□□□□□ -0.4
BUD20YLR074C APP1P53933 587 aa12.56□□□□□ -0.4
BUD20YLR074C VMR1P38735 1592 aa12.54□□□□□ -0.4
BUD20YLR074C PRI1P10363 409 aa12.5□□□□□ -0.41
BUD20YLR074C PTP3P40048 928 aa12.43□□□□□ -0.42
BUD20YLR074C SRB8P25648 1427 aa12.42□□□□□ -0.42
BUD20YLR074C YMR074CQ04773 145 aa12.4□□□□□ -0.42
BUD20YLR074C BUD21Q08492 214 aaPredicted RBP12.38□□□□□ -0.43
BUD20YLR074C PDR5P33302 1511 aaKnown RBP12.32□□□□□ -0.44
BUD20YLR074C BCK1Q01389 1478 aa12.3□□□□□ -0.44
BUD20YLR074C PDR11P40550 1411 aa12.28□□□□□ -0.44
BUD20YLR074C REB1P21538 810 aa12.27□□□□□ -0.45
BUD20YLR074C ENT1Q12518 454 aa12.24□□□□□ -0.45
BUD20YLR074C KRE5P22023 1365 aa12.22□□□□□ -0.45
BUD20YLR074C CFT1Q06632 1357 aaKnown RBP12.21□□□□□ -0.45
BUD20YLR074C RIA1P53893 1110 aa12.21□□□□□ -0.45
BUD20YLR074C BUD31P25337 157 aaPredicted RBP12.2□□□□□ -0.46
BUD20YLR074C YNR029CP53729 429 aaKnown RBP12.2□□□□□ -0.46
BUD20YLR074C ENV9Q08651 330 aa12.2□□□□□ -0.46
BUD20YLR074C MRX12P47084 519 aa12.17□□□□□ -0.46
BUD20YLR074C IMH1Q06704 911 aaKnown RBP12.14□□□□□ -0.47
BUD20YLR074C SSA1P10591 642 aaKnown RBP12.03□□□□□ -0.48
BUD20YLR074C UBP1P25037 809 aa11.97□□□□□ -0.49
BUD20YLR074C GCN2P15442 1659 aa11.97□□□□□ -0.49
BUD20YLR074C YBL086CP38177 466 aa11.96□□□□□ -0.49
BUD20YLR074C TY3B-IQ7LHG5 1498 aaKnown RBP11.95□□□□□ -0.5
BUD20YLR074C YRF1-2P40105 1681 aa11.92□□□□□ -0.5
BUD20YLR074C CAB1Q04430 367 aa11.92□□□□□ -0.5
BUD20YLR074C LEU3P08638 886 aa11.89□□□□□ -0.51
BUD20YLR074C PRP45P28004 379 aaPredicted RBP11.89□□□□□ -0.51
BUD20YLR074C UGA2P38067 497 aa11.89□□□□□ -0.51
BUD20YLR074C RPN11P43588 306 aaKnown RBP11.89□□□□□ -0.51
BUD20YLR074C RRP5Q05022 1729 aaKnown RBP11.89□□□□□ -0.51
BUD20YLR074C GTT3P39996 337 aa11.88□□□□□ -0.51
BUD20YLR074C RRD1P40454 393 aaKnown RBP11.88□□□□□ -0.51
BUD20YLR074C RAD9P14737 1309 aa11.85□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms