RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W IFH1P39520 1085 aa10.56□□□□□ -0.72
SNF7YLR025W YCF1P39109 1515 aaKnown RBP10.56□□□□□ -0.72
SNF7YLR025W RAM2P29703 316 aa10.55□□□□□ -0.72
SNF7YLR025W VPS29P38759 282 aa10.52□□□□□ -0.73
SNF7YLR025W NSR1P27476 414 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73not detected
SNF7YLR025W SNQ2P32568 1501 aaKnown RBP10.49□□□□□ -0.73
SNF7YLR025W IKI3Q06706 1349 aaKnown RBP10.48□□□□□ -0.73
SNF7YLR025W TY2B-LR1P0C2J3 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-FP0CX63 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-GR2P0CX64 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-CP25384 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-DR2Q03494 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY1B-DR1Q03855 1755 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-DR3Q07791 1770 aaKnown RBP10.47□□□□□ -0.73
SNF7YLR025W TY2B-OR1Q12113 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-DR1Q12472 1770 aa10.47□□□□□ -0.73
SNF7YLR025W TY2B-OR2Q12501 1770 aa10.47□□□□□ -0.73
SNF7YLR025W YMR1P47147 688 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
SNF7YLR025W TRM732Q03496 1420 aa10.45□□□□□ -0.74
SNF7YLR025W SPP41P38904 1435 aa10.44□□□□□ -0.74
SNF7YLR025W MAK11P20484 414 aaKnown RBP10.44□□□□□ -0.74
SNF7YLR025W YAP5P40574 245 aa10.44□□□□□ -0.74
SNF7YLR025W TY1B-DR3Q99231 1755 aa10.42□□□□□ -0.74
SNF7YLR025W MLP2P40457 1679 aa10.41□□□□□ -0.74
SNF7YLR025W RTT106P40161 455 aa10.41□□□□□ -0.74
SNF7YLR025W YOR238WQ08634 303 aa10.41□□□□□ -0.74
SNF7YLR025W DBP1P24784 617 aaKnown RBP10.38□□□□□ -0.75
SNF7YLR025W TY2B-BQ12491 1770 aa10.38□□□□□ -0.75
SNF7YLR025W PDR15Q04182 1529 aaKnown RBP10.37□□□□□ -0.75
SNF7YLR025W GEA1P47102 1408 aaPredicted RBP10.36□□□□□ -0.75
SNF7YLR025W TSC11P40061 1430 aa10.35□□□□□ -0.75
SNF7YLR025W STS1P38637 319 aa10.35□□□□□ -0.75
SNF7YLR025W SET1P38827 1080 aaKnown RBP10.34□□□□□ -0.75
SNF7YLR025W MST1P07236 462 aa10.33□□□□□ -0.76
SNF7YLR025W VTH1P40438 1549 aa10.33□□□□□ -0.76
SNF7YLR025W VTH2P40890 1549 aa10.33□□□□□ -0.76
SNF7YLR025W CDC25P04821 1589 aa10.32□□□□□ -0.76
SNF7YLR025W YFR006WP43590 535 aa10.32□□□□□ -0.76
SNF7YLR025W PAN1P32521 1480 aa10.31□□□□□ -0.76
SNF7YLR025W TY1B-HO13535 1793 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-DR5P0C2I2 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-DR6P0C2I3 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-LR2P0C2I5 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-LR3P0C2I6 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-PR1P0C2I9 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-PR2P0C2J0 1756 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-PR3P0C2J1 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-JR1P47098 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-ML2Q03434 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-ER1Q03612 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-ML1Q04711 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-GR2Q12269 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-OLQ12273 1755 aa10.3□□□□□ -0.76
SNF7YLR025W TY1B-PLQ12414 1755 aaKnown RBP10.3□□□□□ -0.76
SNF7YLR025W TY1B-BRQ12193 1756 aa10.29□□□□□ -0.76
SNF7YLR025W TY1B-GR3Q12316 1755 aa10.29□□□□□ -0.76
SNF7YLR025W TY1B-ORQ92393 1755 aa10.29□□□□□ -0.76
SNF7YLR025W SSM4P40318 1319 aa10.28□□□□□ -0.76
SNF7YLR025W COQ8P27697 501 aa10.27□□□□□ -0.77
SNF7YLR025W PIB1Q06651 286 aa10.26□□□□□ -0.77
SNF7YLR025W NOP53Q12080 455 aaKnown RBP10.25□□□□□ -0.77
SNF7YLR025W ULS1Q08562 1619 aa10.25□□□□□ -0.77
SNF7YLR025W MIF2P35201 549 aa10.24□□□□□ -0.77
SNF7YLR025W ESC1Q03661 1658 aaKnown RBP10.22□□□□□ -0.77
SNF7YLR025W SNT2P53127 1403 aa10.21□□□□□ -0.78
SNF7YLR025W VMA1P17255 1071 aaKnown RBP10.19□□□□□ -0.78
SNF7YLR025W NUP170P38181 1502 aa10.17□□□□□ -0.78
SNF7YLR025W GEA2P39993 1459 aaKnown RBP10.17□□□□□ -0.78
SNF7YLR025W EDS1P38073 919 aa10.17□□□□□ -0.78
SNF7YLR025W CKB1P43639 278 aa10.17□□□□□ -0.78
SNF7YLR025W YPR148CQ06523 435 aa10.17□□□□□ -0.78
SNF7YLR025W CAT8P39113 1433 aa10.16□□□□□ -0.78
SNF7YLR025W GTT3P39996 337 aa10.16□□□□□ -0.78
SNF7YLR025W TY1B-JR2P47100 1755 aaKnown RBP10.14□□□□□ -0.79
SNF7YLR025W TY1B-ER2Q03619 1755 aa10.14□□□□□ -0.79
SNF7YLR025W TY1B-MR1Q04214 1755 aa10.14□□□□□ -0.79
SNF7YLR025W TY1B-MR2Q04670 1755 aaKnown RBP10.14□□□□□ -0.79
SNF7YLR025W TY1B-LR1Q12088 1755 aaKnown RBP10.14□□□□□ -0.79
SNF7YLR025W TY1B-NL1Q12112 1755 aa10.14□□□□□ -0.79
SNF7YLR025W TY1B-GR1Q12141 1755 aa10.14□□□□□ -0.79
SNF7YLR025W TY1B-BLQ12490 1755 aa10.14□□□□□ -0.79
SNF7YLR025W VPS15P22219 1454 aa10.14□□□□□ -0.79
SNF7YLR025W PTC3P34221 468 aaKnown RBP10.13□□□□□ -0.79
SNF7YLR025W MET10P39692 1035 aa10.13□□□□□ -0.79
SNF7YLR025W POL5P39985 1022 aaKnown RBP10.12□□□□□ -0.79
SNF7YLR025W VPS70P47161 811 aa10.11□□□□□ -0.79
SNF7YLR025W SAM3Q08986 587 aa10.11□□□□□ -0.79
SNF7YLR025W NTE1Q04958 1679 aa10.1□□□□□ -0.79
SNF7YLR025W NUP159P40477 1460 aa10.1□□□□□ -0.79
SNF7YLR025W RPA190P10964 1664 aaKnown RBP10.09□□□□□ -0.79
SNF7YLR025W TY3B-GQ99315 1547 aa10.08□□□□□ -0.8
SNF7YLR025W BUD21Q08492 214 aaPredicted RBP10.08□□□□□ -0.8
SNF7YLR025W RPO21P04050 1733 aaKnown RBP10.07□□□□□ -0.8
SNF7YLR025W DNF1P32660 1571 aa10.07□□□□□ -0.8
SNF7YLR025W SRB8P25648 1427 aa10.07□□□□□ -0.8
SNF7YLR025W NOP7P53261 605 aaKnown RBP10.04□□□□□ -0.8
SNF7YLR025W YBT1P32386 1661 aa10.03□□□□□ -0.8
SNF7YLR025W IRC20Q06554 1556 aa10.03□□□□□ -0.8
SNF7YLR025W GRE2Q12068 342 aaKnown RBP10.03□□□□□ -0.8
SNF7YLR025W NUP157P40064 1391 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms