RNA–Protein interactions for RNA: YKR105C

VBA5, Transcript of Plasma membrane protein of the Major Facilitator Superfamily (MFS), yeastyeast

Gene VBA5, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA5YKR105C TY1B-NL1Q12112 1755 aa10.1□□□□□ -0.79
VBA5YKR105C TY1B-GR1Q12141 1755 aa10.1□□□□□ -0.79
VBA5YKR105C TY1B-BLQ12490 1755 aa10.1□□□□□ -0.79
VBA5YKR105C IFH1P39520 1085 aa10.1□□□□□ -0.79
VBA5YKR105C ULS1Q08562 1619 aa10.07□□□□□ -0.8
VBA5YKR105C RTT106P40161 455 aa10.06□□□□□ -0.8
VBA5YKR105C RPO21P04050 1733 aaKnown RBP10.05□□□□□ -0.8
VBA5YKR105C NUP159P40477 1460 aa10.04□□□□□ -0.8
VBA5YKR105C SNT2P53127 1403 aa10.03□□□□□ -0.8
VBA5YKR105C GEA1P47102 1408 aaPredicted RBP10.01□□□□□ -0.81
VBA5YKR105C MET5P47169 1442 aa10.01□□□□□ -0.81
VBA5YKR105C GEA2P39993 1459 aaKnown RBP9.99□□□□□ -0.81
VBA5YKR105C VPS15P22219 1454 aa9.91□□□□□ -0.82
VBA5YKR105C IRC20Q06554 1556 aa9.91□□□□□ -0.82
VBA5YKR105C IKI3Q06706 1349 aaKnown RBP9.9□□□□□ -0.82
VBA5YKR105C YRF1-1P0CX20 1796 aa9.9□□□□□ -0.83
VBA5YKR105C YRF1-5P0CX21 1796 aa9.9□□□□□ -0.83
VBA5YKR105C YRF1-8P0CX22 1796 aa9.9□□□□□ -0.83
VBA5YKR105C MET10P39692 1035 aa9.89□□□□□ -0.83
VBA5YKR105C TY3B-GQ99315 1547 aa9.88□□□□□ -0.83
VBA5YKR105C CAT8P39113 1433 aa9.87□□□□□ -0.83
VBA5YKR105C YBT1P32386 1661 aa9.86□□□□□ -0.83
VBA5YKR105C SPO14P36126 1683 aa9.86□□□□□ -0.83
VBA5YKR105C PDR12Q02785 1511 aa9.84□□□□□ -0.83
VBA5YKR105C NUP157P40064 1391 aaKnown RBP9.84□□□□□ -0.83
VBA5YKR105C LTE1P07866 1435 aa9.83□□□□□ -0.84
VBA5YKR105C GDB1Q06625 1536 aa9.83□□□□□ -0.84
VBA5YKR105C PDR10P51533 1564 aa9.81□□□□□ -0.84
VBA5YKR105C NUP170P38181 1502 aa9.79□□□□□ -0.84
VBA5YKR105C CKB1P43639 278 aa9.79□□□□□ -0.84
VBA5YKR105C ARO1P08566 1588 aaKnown RBP9.76□□□□□ -0.85
VBA5YKR105C SSM4P40318 1319 aa9.76□□□□□ -0.85
VBA5YKR105C IQG1Q12280 1495 aa9.74□□□□□ -0.85
VBA5YKR105C SRB8P25648 1427 aa9.73□□□□□ -0.85
VBA5YKR105C DRS2P39524 1355 aa9.73□□□□□ -0.85
VBA5YKR105C BUD3P25558 1636 aa9.72□□□□□ -0.85
VBA5YKR105C URN1Q06525 465 aaKnown RBP9.72□□□□□ -0.85
VBA5YKR105C BUD21Q08492 214 aaPredicted RBP9.64□□□□□ -0.87
VBA5YKR105C DOP1Q03921 1698 aa9.64□□□□□ -0.87
VBA5YKR105C TRM3Q07527 1436 aa9.64□□□□□ -0.87
VBA5YKR105C MMS1Q06211 1407 aa9.63□□□□□ -0.87
VBA5YKR105C YSP2Q06681 1438 aa9.63□□□□□ -0.87
VBA5YKR105C BNR1P40450 1375 aa9.62□□□□□ -0.87
VBA5YKR105C ITT1Q04638 464 aa9.6□□□□□ -0.87
VBA5YKR105C CHC1P22137 1653 aaKnown RBP9.58□□□□□ -0.88
VBA5YKR105C BNI1P41832 1953 aa9.56□□□□□ -0.88
VBA5YKR105C GCN2P15442 1659 aa9.54□□□□□ -0.88
VBA5YKR105C SEC7P11075 2009 aaKnown RBP9.53□□□□□ -0.88
VBA5YKR105C NOP7P53261 605 aaKnown RBP9.47□□□□□ -0.89
VBA5YKR105C PAF1P38351 445 aa9.46□□□□□ -0.89
VBA5YKR105C YOR093CQ12275 1648 aa9.45□□□□□ -0.9
VBA5YKR105C DNF2Q12675 1612 aa9.44□□□□□ -0.9
VBA5YKR105C PDR5P33302 1511 aaKnown RBP9.41□□□□□ -0.9
VBA5YKR105C NUP188P52593 1655 aaKnown RBP9.4□□□□□ -0.9
VBA5YKR105C EBP2P36049 427 aaKnown RBP9.39□□□□□ -0.91
VBA5YKR105C IML1P47170 1584 aa9.38□□□□□ -0.91
VBA5YKR105C VMR1P38735 1592 aa9.38□□□□□ -0.91
VBA5YKR105C SIS2P36024 562 aa9.36□□□□□ -0.91
VBA5YKR105C ABP1P15891 592 aaKnown RBP9.35□□□□□ -0.91
VBA5YKR105C CAB3P36076 571 aa9.32□□□□□ -0.92
VBA5YKR105C NOP2P40991 618 aaKnown RBP9.32□□□□□ -0.92
VBA5YKR105C YAP3P38749 330 aa9.31□□□□□ -0.92
VBA5YKR105C RAV1P47104 1357 aa9.3□□□□□ -0.92
VBA5YKR105C IPL1P38991 367 aa9.29□□□□□ -0.92
VBA5YKR105C PDR11P40550 1411 aa9.29□□□□□ -0.92
VBA5YKR105C POL5P39985 1022 aaKnown RBP9.28□□□□□ -0.92
VBA5YKR105C TYS1P36421 394 aaKnown RBP9.27□□□□□ -0.93
VBA5YKR105C DNF3Q12674 1656 aa9.27□□□□□ -0.93
VBA5YKR105C RTC1Q08281 1341 aa9.26□□□□□ -0.93
VBA5YKR105C TAF5P38129 798 aa9.22□□□□□ -0.93
VBA5YKR105C ESL2P36168 1195 aa9.19□□□□□ -0.94
VBA5YKR105C ORC1P54784 914 aaPredicted RBP9.19□□□□□ -0.94
VBA5YKR105C HAP1P0CE41 1502 aa9.16□□□□□ -0.94
VBA5YKR105C NUP192P47054 1683 aa9.15□□□□□ -0.94
VBA5YKR105C MAK10Q02197 733 aa9.14□□□□□ -0.95
VBA5YKR105C NAP1P25293 417 aaKnown RBP9.14□□□□□ -0.95
VBA5YKR105C TFA1P36100 482 aa9.14□□□□□ -0.95
VBA5YKR105C MRX12P47084 519 aa9.14□□□□□ -0.95
VBA5YKR105C KIP3P53086 805 aaKnown RBP9.13□□□□□ -0.95
VBA5YKR105C FAP1P53971 965 aa9.12□□□□□ -0.95
VBA5YKR105C TY3B-IQ7LHG5 1498 aaKnown RBP9.12□□□□□ -0.95
VBA5YKR105C SCT1P32784 759 aa9.11□□□□□ -0.95
VBA5YKR105C RAD9P14737 1309 aa9.11□□□□□ -0.95
VBA5YKR105C BCK1Q01389 1478 aa9.1□□□□□ -0.95
VBA5YKR105C ALD4P46367 519 aaKnown RBP9.1□□□□□ -0.95
VBA5YKR105C CAB1Q04430 367 aa9.1□□□□□ -0.95
VBA5YKR105C KRE5P22023 1365 aa9.09□□□□□ -0.95
VBA5YKR105C MHP1P43638 1398 aa9.09□□□□□ -0.95
VBA5YKR105C YFR016CP43597 1233 aaKnown RBP9.08□□□□□ -0.96
VBA5YKR105C TAF8Q03750 510 aa9.08□□□□□ -0.96
VBA5YKR105C YLR419WQ06698 1435 aaKnown RBP9.08□□□□□ -0.96
VBA5YKR105C MIF2P35201 549 aa9.08□□□□□ -0.96
VBA5YKR105C RIA1P53893 1110 aa9.07□□□□□ -0.96
VBA5YKR105C SPE2P21182 396 aa9.06□□□□□ -0.96
VBA5YKR105C SEC3P33332 1336 aaKnown RBP9.05□□□□□ -0.96
VBA5YKR105C USO1P25386 1790 aa9.03□□□□□ -0.96
VBA5YKR105C AVT3P36062 692 aa9.02□□□□□ -0.96
VBA5YKR105C TY1B-NL2Q99337 1749 aaKnown RBP9.02□□□□□ -0.97
VBA5YKR105C CFT1Q06632 1357 aaKnown RBP9□□□□□ -0.97
VBA5YKR105C PDS5Q04264 1277 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms