RNA–Protein interactions for RNA: YKR093W

PTR2, Transcript of Integral membrane peptide transporter, yeastyeast

Gene PTR2, Length 1,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR2YKR093W VHR2P40041 505 aa8.68□□□□□ -1.02
PTR2YKR093W NOP8Q08287 484 aaPredicted RBP8.67□□□□□ -1.02
PTR2YKR093W SSA1P10591 642 aaKnown RBP8.66□□□□□ -1.02
PTR2YKR093W UBP14P38237 781 aaKnown RBP8.66□□□□□ -1.02
PTR2YKR093W YOR238WQ08634 303 aa8.66□□□□□ -1.02
PTR2YKR093W SUB2Q07478 446 aaKnown RBP8.66□□□□□ -1.02
PTR2YKR093W GEF1P37020 779 aa8.64□□□□□ -1.03
PTR2YKR093W SSA2P10592 639 aaKnown RBP8.64□□□□□ -1.03
PTR2YKR093W YLR326WQ06170 240 aaKnown RBP8.63□□□□□ -1.03
PTR2YKR093W GLN1P32288 370 aaKnown RBP8.61□□□□□ -1.03
PTR2YKR093W BIM1P40013 344 aa8.61□□□□□ -1.03
PTR2YKR093W SLX8P40072 274 aa8.61□□□□□ -1.03
PTR2YKR093W CSN12P47130 423 aa8.61□□□□□ -1.03
PTR2YKR093W PSE1P32337 1089 aaKnown RBP8.6□□□□□ -1.03
PTR2YKR093W ATG32P40458 529 aa8.58□□□□□ -1.04
PTR2YKR093W YJL007CP47080 104 aa8.58□□□□□ -1.04
PTR2YKR093W VMA1P17255 1071 aaKnown RBP8.55□□□□□ -1.04
PTR2YKR093W KIC1P38692 1080 aa8.55□□□□□ -1.04
PTR2YKR093W ATH1P48016 1211 aa8.54□□□□□ -1.04
PTR2YKR093W KTR1P27810 393 aaKnown RBP8.54□□□□□ -1.04
PTR2YKR093W YGR273CP53329 174 aa8.54□□□□□ -1.04
PTR2YKR093W PIB1Q06651 286 aa8.54□□□□□ -1.04
PTR2YKR093W GUT1P32190 709 aa8.53□□□□□ -1.04
PTR2YKR093W GRE2Q12068 342 aaKnown RBP8.53□□□□□ -1.04
PTR2YKR093W NSR1P27476 414 aaKnown RBP RIP-Chip data8.52□□□□□ -1.04not detected
PTR2YKR093W PCS60P38137 543 aaKnown RBP RIP-Chip data8.52□□□□□ -1.04not detected
PTR2YKR093W RAD54P32863 898 aa8.52□□□□□ -1.05
PTR2YKR093W SSA4P22202 642 aaKnown RBP8.51□□□□□ -1.05
PTR2YKR093W KEX1P09620 729 aa8.5□□□□□ -1.05
PTR2YKR093W ORC6P38826 435 aa8.5□□□□□ -1.05
PTR2YKR093W ERG12P07277 443 aa8.49□□□□□ -1.05
PTR2YKR093W TIF1P10081 395 aaKnown RBP8.48□□□□□ -1.05
PTR2YKR093W TEA1P47988 759 aa8.48□□□□□ -1.05
PTR2YKR093W YGL015CP33199 130 aa8.47□□□□□ -1.05
PTR2YKR093W SOL3P38858 249 aa8.47□□□□□ -1.05
PTR2YKR093W TYW1Q08960 810 aaKnown RBP8.47□□□□□ -1.05
PTR2YKR093W RPL34BP40525 121 aaKnown RBP8.47□□□□□ -1.05
PTR2YKR093W YAP5P40574 245 aa8.47□□□□□ -1.05
PTR2YKR093W BIO2P32451 375 aa8.45□□□□□ -1.06
PTR2YKR093W CPS1P27614 576 aa8.44□□□□□ -1.06
PTR2YKR093W YBL036CP38197 257 aa8.44□□□□□ -1.06
PTR2YKR093W SAM3Q08986 587 aa8.43□□□□□ -1.06
PTR2YKR093W TTI1P36097 1038 aa8.42□□□□□ -1.06
PTR2YKR093W ORC1P54784 914 aaPredicted RBP8.42□□□□□ -1.06
PTR2YKR093W RGR1P19263 1082 aa8.41□□□□□ -1.06
PTR2YKR093W YPR204WQ08995 1032 aa8.41□□□□□ -1.06
PTR2YKR093W AIM44Q99299 758 aa8.4□□□□□ -1.06
PTR2YKR093W MRX12P47084 519 aa8.4□□□□□ -1.07
PTR2YKR093W NST1P53935 1240 aa8.4□□□□□ -1.07
PTR2YKR093W NOB1Q08444 459 aaKnown RBP8.39□□□□□ -1.07
PTR2YKR093W CLB5P30283 435 aa8.38□□□□□ -1.07
PTR2YKR093W RTG2P32608 588 aaKnown RBP8.38□□□□□ -1.07
PTR2YKR093W NIS1P53939 407 aa8.38□□□□□ -1.07
PTR2YKR093W GYP5Q12344 894 aa8.38□□□□□ -1.07
PTR2YKR093W MVP1P40959 511 aaKnown RBP8.36□□□□□ -1.07
PTR2YKR093W HST2P53686 357 aa8.36□□□□□ -1.07
PTR2YKR093W TIF4632P39936 914 aaKnown RBP8.36□□□□□ -1.07
PTR2YKR093W FPK1P53739 893 aa8.36□□□□□ -1.07
PTR2YKR093W RAD59Q12223 238 aa8.36□□□□□ -1.07
PTR2YKR093W YNL108CP53929 270 aa8.35□□□□□ -1.07
PTR2YKR093W RPL34AP87262 121 aaPredicted RBP8.35□□□□□ -1.07
PTR2YKR093W GAP1P19145 602 aaPredicted RBP8.33□□□□□ -1.08
PTR2YKR093W CDC3P32457 520 aaKnown RBP8.33□□□□□ -1.08
PTR2YKR093W CSE4P36012 229 aa8.33□□□□□ -1.08
PTR2YKR093W PKH3Q03306 898 aaPredicted RBP8.33□□□□□ -1.08
PTR2YKR093W SLD2P34252 453 aa8.33□□□□□ -1.08
PTR2YKR093W ILV3P39522 585 aaKnown RBP8.32□□□□□ -1.08
PTR2YKR093W SUP45P12385 437 aaKnown RBP8.31□□□□□ -1.08
PTR2YKR093W ESS1P22696 170 aa8.31□□□□□ -1.08
PTR2YKR093W YMR196WQ04336 1088 aa8.31□□□□□ -1.08
PTR2YKR093W MMP1Q12372 583 aa8.31□□□□□ -1.08
PTR2YKR093W SCJ1P25303 377 aa8.31□□□□□ -1.08
PTR2YKR093W TGL3P40308 642 aa8.31□□□□□ -1.08
PTR2YKR093W SSF1P38789 453 aaPredicted RBP8.3□□□□□ -1.08
PTR2YKR093W YML083CQ04526 418 aa8.29□□□□□ -1.08
PTR2YKR093W PUP1P25043 261 aa8.29□□□□□ -1.08
PTR2YKR093W YJU3P28321 313 aa8.29□□□□□ -1.08
PTR2YKR093W DCW1P36091 449 aa8.29□□□□□ -1.08
PTR2YKR093W AI4P03878 556 aa8.28□□□□□ -1.08
PTR2YKR093W MPH3P0CE00 602 aa8.28□□□□□ -1.08
PTR2YKR093W NOP7P53261 605 aaKnown RBP8.28□□□□□ -1.08
PTR2YKR093W SEN54Q02825 467 aaPredicted RBP8.27□□□□□ -1.09
PTR2YKR093W ENO1P00924 437 aaKnown RBP8.26□□□□□ -1.09
PTR2YKR093W CSC1Q06538 782 aa8.26□□□□□ -1.09
PTR2YKR093W ENO2P00925 437 aaKnown RBP8.26□□□□□ -1.09
PTR2YKR093W YPR109WQ06104 294 aa8.26□□□□□ -1.09
PTR2YKR093W MRX10Q05648 414 aa8.25□□□□□ -1.09
PTR2YKR093W SIT4P20604 311 aa8.24□□□□□ -1.09
PTR2YKR093W YDJ1P25491 409 aaKnown RBP8.24□□□□□ -1.09
PTR2YKR093W SNU71P53207 620 aaKnown RBP8.24□□□□□ -1.09
PTR2YKR093W ARG8P18544 423 aa8.24□□□□□ -1.09
PTR2YKR093W SIS2P36024 562 aa8.24□□□□□ -1.09
PTR2YKR093W SLI15P38283 698 aa8.23□□□□□ -1.09
PTR2YKR093W SPT5P27692 1063 aaKnown RBP8.22□□□□□ -1.09
PTR2YKR093W RIM21P48565 533 aa8.22□□□□□ -1.09
PTR2YKR093W YOL036WQ08206 761 aa8.22□□□□□ -1.09
PTR2YKR093W HAT1Q12341 374 aa8.22□□□□□ -1.09
PTR2YKR093W RSC30P38781 883 aa8.21□□□□□ -1.1
PTR2YKR093W HTA1P04911 132 aaKnown RBP8.2□□□□□ -1.1
PTR2YKR093W HTA2P04912 132 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms