RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C PTC3P34221 468 aaKnown RBP2.75□□□□□ -1.97
HIR3YJR140C GLC3P32775 704 aa2.74□□□□□ -1.97
HIR3YJR140C RCR1P38212 213 aa2.74□□□□□ -1.97
HIR3YJR140C GTT3P39996 337 aa2.73□□□□□ -1.97
HIR3YJR140C RAD54P32863 898 aa2.73□□□□□ -1.97
HIR3YJR140C NUP42P49686 430 aaKnown RBP2.73□□□□□ -1.97
HIR3YJR140C SAM3Q08986 587 aa2.72□□□□□ -1.97
HIR3YJR140C RPL34BP40525 121 aaKnown RBP2.72□□□□□ -1.97
HIR3YJR140C SIS2P36024 562 aa2.72□□□□□ -1.97
HIR3YJR140C EDS1P38073 919 aa2.72□□□□□ -1.97
HIR3YJR140C AIM44Q99299 758 aa2.72□□□□□ -1.97
HIR3YJR140C STS1P38637 319 aa2.71□□□□□ -1.98
HIR3YJR140C VMA1P17255 1071 aaKnown RBP2.71□□□□□ -1.98
HIR3YJR140C MSB4Q12317 492 aa2.7□□□□□ -1.98
HIR3YJR140C GYP5Q12344 894 aa2.7□□□□□ -1.98
HIR3YJR140C DIT2P21595 489 aa2.7□□□□□ -1.98
HIR3YJR140C CSE4P36012 229 aa2.7□□□□□ -1.98
HIR3YJR140C UBP14P38237 781 aaKnown RBP2.7□□□□□ -1.98
HIR3YJR140C SPT5P27692 1063 aaKnown RBP2.69□□□□□ -1.98
HIR3YJR140C YCK3P39962 524 aa2.69□□□□□ -1.98
HIR3YJR140C EAP1P36041 632 aaKnown RBP2.69□□□□□ -1.98
HIR3YJR140C YGR273CP53329 174 aa2.69□□□□□ -1.98
HIR3YJR140C CSC1Q06538 782 aa2.69□□□□□ -1.98
HIR3YJR140C CSN12P47130 423 aa2.69□□□□□ -1.98
HIR3YJR140C SSA1P10591 642 aaKnown RBP2.69□□□□□ -1.98
HIR3YJR140C TEA1P47988 759 aa2.69□□□□□ -1.98
HIR3YJR140C SSA4P22202 642 aaKnown RBP2.68□□□□□ -1.98
HIR3YJR140C YFR006WP43590 535 aa2.68□□□□□ -1.98
HIR3YJR140C SLD2P34252 453 aa2.68□□□□□ -1.98
HIR3YJR140C HTA1P04911 132 aaKnown RBP2.68□□□□□ -1.98
HIR3YJR140C HTA2P04912 132 aa2.68□□□□□ -1.98
HIR3YJR140C VHR2P40041 505 aa2.68□□□□□ -1.98
HIR3YJR140C TFB4Q12004 338 aa2.68□□□□□ -1.98
HIR3YJR140C YMR196WQ04336 1088 aa2.67□□□□□ -1.98
HIR3YJR140C GUA1P38625 525 aaKnown RBP2.67□□□□□ -1.98
HIR3YJR140C YPP1P46951 817 aa2.67□□□□□ -1.98
HIR3YJR140C AI4P03878 556 aa2.67□□□□□ -1.98
HIR3YJR140C YLR326WQ06170 240 aaKnown RBP2.67□□□□□ -1.98
HIR3YJR140C KEX1P09620 729 aa2.66□□□□□ -1.98
HIR3YJR140C PEX21P50091 288 aa2.66□□□□□ -1.98
HIR3YJR140C GEF1P37020 779 aa2.66□□□□□ -1.98
HIR3YJR140C YBL036CP38197 257 aa2.66□□□□□ -1.98
HIR3YJR140C TFB3Q03290 321 aa2.66□□□□□ -1.98
HIR3YJR140C MPH3P0CE00 602 aa2.66□□□□□ -1.98
HIR3YJR140C GLN1P32288 370 aaKnown RBP2.66□□□□□ -1.98
HIR3YJR140C MST1P07236 462 aa2.66□□□□□ -1.98
HIR3YJR140C YDR090CQ03193 310 aa2.66□□□□□ -1.98
HIR3YJR140C JIP4Q03361 876 aa2.65□□□□□ -1.99
HIR3YJR140C ORC6P38826 435 aa2.65□□□□□ -1.99
HIR3YJR140C ATG3P40344 310 aa2.65□□□□□ -1.99
HIR3YJR140C HST2P53686 357 aa2.65□□□□□ -1.99
HIR3YJR140C RTF1P53064 558 aa2.64□□□□□ -1.99
HIR3YJR140C LAM6Q08001 693 aa2.64□□□□□ -1.99
HIR3YJR140C RPL34AP87262 121 aaPredicted RBP2.63□□□□□ -1.99
HIR3YJR140C YOL036WQ08206 761 aa2.63□□□□□ -1.99
HIR3YJR140C MMP1Q12372 583 aa2.63□□□□□ -1.99
HIR3YJR140C NAF1P53919 492 aaKnown RBP2.63□□□□□ -1.99
HIR3YJR140C ASF1P32447 279 aa2.63□□□□□ -1.99
HIR3YJR140C PCS60P38137 543 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
HIR3YJR140C DCW1P36091 449 aa2.62□□□□□ -1.99
HIR3YJR140C MRX12P47084 519 aa2.62□□□□□ -1.99
HIR3YJR140C NOP7P53261 605 aaKnown RBP2.62□□□□□ -1.99
HIR3YJR140C YJL007CP47080 104 aa2.62□□□□□ -1.99
HIR3YJR140C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
HIR3YJR140C CDC3P32457 520 aaKnown RBP2.61□□□□□ -1.99
HIR3YJR140C BIM1P40013 344 aa2.61□□□□□ -1.99
HIR3YJR140C NOP8Q08287 484 aaPredicted RBP2.61□□□□□ -1.99
HIR3YJR140C RGR1P19263 1082 aa2.61□□□□□ -1.99
HIR3YJR140C TFG1P41895 735 aaPredicted RBP2.61□□□□□ -1.99
HIR3YJR140C SUB2Q07478 446 aaKnown RBP2.61□□□□□ -1.99
HIR3YJR140C PTC4P38089 393 aa2.6□□□□□ -1.99
HIR3YJR140C SLX8P40072 274 aa2.6□□□□□ -1.99
HIR3YJR140C PIB1Q06651 286 aa2.6□□□□□ -1.99
HIR3YJR140C SIT4P20604 311 aa2.6□□□□□ -1.99
HIR3YJR140C YPR109WQ06104 294 aa2.6□□□□□ -1.99
HIR3YJR140C NAP1P25293 417 aaKnown RBP2.6□□□□□ -1.99
HIR3YJR140C MVP1P40959 511 aaKnown RBP2.6□□□□□ -1.99
HIR3YJR140C GAP1P19145 602 aaPredicted RBP2.6□□□□□ -1.99
HIR3YJR140C DAN4P47179 1161 aa2.6□□□□□ -1.99
HIR3YJR140C NPL4P33755 580 aa2.59□□□□□ -1.99
HIR3YJR140C TBF1Q02457 562 aa2.59□□□□□ -1.99
HIR3YJR140C YML020WQ03722 664 aa2.59□□□□□ -1.99
HIR3YJR140C RAD59Q12223 238 aa2.59□□□□□ -1.99
HIR3YJR140C UBP9P39967 754 aa2.59□□□□□ -1.99
HIR3YJR140C SNU71P53207 620 aaKnown RBP2.59□□□□□ -1.99
HIR3YJR140C PKH3Q03306 898 aaPredicted RBP2.59□□□□□ -1.99
HIR3YJR140C FPK1P53739 893 aa2.59□□□□□ -2
HIR3YJR140C YNL115CP53925 644 aa2.59□□□□□ -2
HIR3YJR140C ISU2Q12056 156 aa2.59□□□□□ -2
HIR3YJR140C YEL023CP39992 682 aa2.59□□□□□ -2
HIR3YJR140C PEX29Q03370 554 aa2.59□□□□□ -2
HIR3YJR140C ARG8P18544 423 aa2.58□□□□□ -2
HIR3YJR140C SEC20P28791 383 aa2.58□□□□□ -2
HIR3YJR140C SET4P42948 560 aa2.58□□□□□ -2
HIR3YJR140C DPL1Q05567 589 aa2.58□□□□□ -2
HIR3YJR140C TIF1P10081 395 aaKnown RBP2.58□□□□□ -2
HIR3YJR140C MAK16P10962 306 aaPredicted RBP2.58□□□□□ -2
HIR3YJR140C SOL3P38858 249 aa2.58□□□□□ -2
HIR3YJR140C PAT1P25644 796 aaKnown RBP2.58□□□□□ -2
HIR3YJR140C RTG2P32608 588 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms