RNA–Protein interactions for RNA: YJR045C

SSC1, Transcript of Hsp70 family ATPase, yeastyeast

Gene SSC1, Length 1,965 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSC1YJR045C RPO21P04050 1733 aaKnown RBP11.12□□□□□ -0.63
SSC1YJR045C BNI1P41832 1953 aa11.12□□□□□ -0.63
SSC1YJR045C TSC11P40061 1430 aa11.11□□□□□ -0.63
SSC1YJR045C VPS15P22219 1454 aa11.06□□□□□ -0.64
SSC1YJR045C MYO4P32492 1471 aa11.05□□□□□ -0.64
SSC1YJR045C YTA7P40340 1379 aa11.01□□□□□ -0.65
SSC1YJR045C SNQ2P32568 1501 aaKnown RBP11.01□□□□□ -0.65
SSC1YJR045C ITT1Q04638 464 aa10.98□□□□□ -0.65
SSC1YJR045C DRS2P39524 1355 aa10.94□□□□□ -0.66
SSC1YJR045C MMS1Q06211 1407 aa10.92□□□□□ -0.66
SSC1YJR045C SNT2P53127 1403 aa10.91□□□□□ -0.66
SSC1YJR045C SPO14P36126 1683 aa10.88□□□□□ -0.67
SSC1YJR045C MLP2P40457 1679 aa10.88□□□□□ -0.67
SSC1YJR045C MIF2P35201 549 aa10.88□□□□□ -0.67
SSC1YJR045C NUP170P38181 1502 aa10.88□□□□□ -0.67
SSC1YJR045C STH1P32597 1359 aa10.87□□□□□ -0.67
SSC1YJR045C ULS1Q08562 1619 aa10.87□□□□□ -0.67
SSC1YJR045C IRC20Q06554 1556 aa10.83□□□□□ -0.68
SSC1YJR045C PDR12Q02785 1511 aa10.82□□□□□ -0.68
SSC1YJR045C DNF2Q12675 1612 aa10.8□□□□□ -0.68
SSC1YJR045C PDR15Q04182 1529 aaKnown RBP10.79□□□□□ -0.68
SSC1YJR045C GDB1Q06625 1536 aa10.78□□□□□ -0.68
SSC1YJR045C ABP1P15891 592 aaKnown RBP10.78□□□□□ -0.68
SSC1YJR045C MET10P39692 1035 aa10.78□□□□□ -0.68
SSC1YJR045C DOP1Q03921 1698 aa10.77□□□□□ -0.69
SSC1YJR045C RTT106P40161 455 aa10.76□□□□□ -0.69
SSC1YJR045C IQG1Q12280 1495 aa10.71□□□□□ -0.7
SSC1YJR045C NUP157P40064 1391 aaKnown RBP10.69□□□□□ -0.7
SSC1YJR045C SAS10Q12136 610 aaPredicted RBP10.69□□□□□ -0.7
SSC1YJR045C TRM3Q07527 1436 aa10.67□□□□□ -0.7
SSC1YJR045C PDR10P51533 1564 aa10.67□□□□□ -0.7
SSC1YJR045C BUD3P25558 1636 aa10.64□□□□□ -0.71
SSC1YJR045C TFA1P36100 482 aa10.62□□□□□ -0.71
SSC1YJR045C CHC1P22137 1653 aaKnown RBP10.62□□□□□ -0.71
SSC1YJR045C YBT1P32386 1661 aa10.6□□□□□ -0.71
SSC1YJR045C TAF7Q05021 590 aa10.59□□□□□ -0.71
SSC1YJR045C IFH1P39520 1085 aa10.57□□□□□ -0.72
SSC1YJR045C ARO1P08566 1588 aaKnown RBP10.57□□□□□ -0.72
SSC1YJR045C TY3B-GQ99315 1547 aa10.57□□□□□ -0.72
SSC1YJR045C GEA1P47102 1408 aaPredicted RBP10.55□□□□□ -0.72
SSC1YJR045C BFR2Q06631 534 aaKnown RBP10.54□□□□□ -0.72
SSC1YJR045C YOR093CQ12275 1648 aa10.54□□□□□ -0.72
SSC1YJR045C CAT8P39113 1433 aa10.53□□□□□ -0.72
SSC1YJR045C YFR006WP43590 535 aa10.53□□□□□ -0.72
SSC1YJR045C SEC7P11075 2009 aaKnown RBP10.47□□□□□ -0.73
SSC1YJR045C DNF3Q12674 1656 aa10.44□□□□□ -0.74
SSC1YJR045C YSP2Q06681 1438 aa10.41□□□□□ -0.74
SSC1YJR045C CKB1P43639 278 aa10.38□□□□□ -0.75
SSC1YJR045C BNR1P40450 1375 aa10.36□□□□□ -0.75
SSC1YJR045C SRB8P25648 1427 aa10.28□□□□□ -0.76
SSC1YJR045C YAP3P38749 330 aa10.26□□□□□ -0.77
SSC1YJR045C USO1P25386 1790 aa10.21□□□□□ -0.78
SSC1YJR045C NUP188P52593 1655 aaKnown RBP10.2□□□□□ -0.78
SSC1YJR045C NOP2P40991 618 aaKnown RBP10.18□□□□□ -0.78
SSC1YJR045C IML1P47170 1584 aa10.18□□□□□ -0.78
SSC1YJR045C URN1Q06525 465 aaKnown RBP10.17□□□□□ -0.78
SSC1YJR045C MAK10Q02197 733 aa10.16□□□□□ -0.78
SSC1YJR045C VMR1P38735 1592 aa10.16□□□□□ -0.78
SSC1YJR045C BUD21Q08492 214 aaPredicted RBP10.14□□□□□ -0.79
SSC1YJR045C HAP1P0CE41 1502 aa10.1□□□□□ -0.79
SSC1YJR045C IPL1P38991 367 aa10.08□□□□□ -0.8
SSC1YJR045C IKI3Q06706 1349 aaKnown RBP10.06□□□□□ -0.8
SSC1YJR045C TY1B-NL2Q99337 1749 aaKnown RBP10.05□□□□□ -0.8
SSC1YJR045C TYS1P36421 394 aaKnown RBP10.04□□□□□ -0.8
SSC1YJR045C PDR5P33302 1511 aaKnown RBP10.03□□□□□ -0.8
SSC1YJR045C SSM4P40318 1319 aa10□□□□□ -0.81
SSC1YJR045C GCN2P15442 1659 aa10□□□□□ -0.81
SSC1YJR045C PDR11P40550 1411 aa9.93□□□□□ -0.82
SSC1YJR045C THI12P42883 340 aa9.93□□□□□ -0.82
SSC1YJR045C THI5P43534 340 aa9.93□□□□□ -0.82
SSC1YJR045C THI11P47183 340 aa9.93□□□□□ -0.82
SSC1YJR045C THI13Q07748 340 aa9.93□□□□□ -0.82
SSC1YJR045C YMR196WQ04336 1088 aa9.92□□□□□ -0.82
SSC1YJR045C NSR1P27476 414 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
SSC1YJR045C KRE5P22023 1365 aa9.82□□□□□ -0.84
SSC1YJR045C NUP192P47054 1683 aa9.81□□□□□ -0.84
SSC1YJR045C CFT1Q06632 1357 aaKnown RBP9.8□□□□□ -0.84
SSC1YJR045C BCK1Q01389 1478 aa9.79□□□□□ -0.84
SSC1YJR045C RAV1P47104 1357 aa9.78□□□□□ -0.84
SSC1YJR045C RIA1P53893 1110 aa9.77□□□□□ -0.84
SSC1YJR045C MRX12P47084 519 aa9.76□□□□□ -0.85
SSC1YJR045C PAF1P38351 445 aa9.74□□□□□ -0.85
SSC1YJR045C YNR029CP53729 429 aaKnown RBP9.72□□□□□ -0.85
SSC1YJR045C EBP2P36049 427 aaKnown RBP9.71□□□□□ -0.86
SSC1YJR045C CAB3P36076 571 aa9.71□□□□□ -0.86
SSC1YJR045C RAD9P14737 1309 aa9.69□□□□□ -0.86
SSC1YJR045C RTC1Q08281 1341 aa9.68□□□□□ -0.86
SSC1YJR045C CAB1Q04430 367 aa9.68□□□□□ -0.86
SSC1YJR045C YAH1Q12184 172 aaKnown RBP9.66□□□□□ -0.86
SSC1YJR045C FAP1P53971 965 aa9.66□□□□□ -0.86
SSC1YJR045C PTP3P40048 928 aa9.65□□□□□ -0.86
SSC1YJR045C TY3B-IQ7LHG5 1498 aaKnown RBP9.65□□□□□ -0.86
SSC1YJR045C ALD4P46367 519 aaKnown RBP9.64□□□□□ -0.87
SSC1YJR045C NOP7P53261 605 aaKnown RBP9.64□□□□□ -0.87
SSC1YJR045C APP1P53933 587 aa9.63□□□□□ -0.87
SSC1YJR045C RRP5Q05022 1729 aaKnown RBP9.58□□□□□ -0.88
SSC1YJR045C YRF1-2P40105 1681 aa9.57□□□□□ -0.88
SSC1YJR045C REB1P21538 810 aa9.55□□□□□ -0.88
SSC1YJR045C GLN1P32288 370 aaKnown RBP9.55□□□□□ -0.88
SSC1YJR045C YIL055CP40523 627 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 6.6 ms