RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeastyeast

Gene NUC1, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUC1YJL208C TAF7Q05021 590 aa14.02□□□□□ -0.17
NUC1YJL208C RPO21P04050 1733 aaKnown RBP14.01□□□□□ -0.17
NUC1YJL208C SNT2P53127 1403 aa13.97□□□□□ -0.17
NUC1YJL208C NUP159P40477 1460 aa13.96□□□□□ -0.17
NUC1YJL208C SAS10Q12136 610 aaPredicted RBP13.95□□□□□ -0.18
NUC1YJL208C PDR15Q04182 1529 aaKnown RBP13.95□□□□□ -0.18
NUC1YJL208C ULS1Q08562 1619 aa13.94□□□□□ -0.18
NUC1YJL208C GEA2P39993 1459 aaKnown RBP13.88□□□□□ -0.19
NUC1YJL208C YRF1-1P0CX20 1796 aa13.86□□□□□ -0.19
NUC1YJL208C YRF1-5P0CX21 1796 aa13.86□□□□□ -0.19
NUC1YJL208C YRF1-8P0CX22 1796 aa13.86□□□□□ -0.19
NUC1YJL208C LTE1P07866 1435 aa13.82□□□□□ -0.2
NUC1YJL208C VPS15P22219 1454 aa13.8□□□□□ -0.2
NUC1YJL208C IRC20Q06554 1556 aa13.79□□□□□ -0.2
NUC1YJL208C PDR12Q02785 1511 aa13.78□□□□□ -0.2
NUC1YJL208C RTT106P40161 455 aa13.77□□□□□ -0.21
NUC1YJL208C FAP1P53971 965 aa13.77□□□□□ -0.21
NUC1YJL208C GEA1P47102 1408 aaPredicted RBP13.76□□□□□ -0.21
NUC1YJL208C MET10P39692 1035 aa13.7□□□□□ -0.22
NUC1YJL208C SPO14P36126 1683 aa13.69□□□□□ -0.22
NUC1YJL208C CAT8P39113 1433 aa13.69□□□□□ -0.22
NUC1YJL208C GDB1Q06625 1536 aa13.69□□□□□ -0.22
NUC1YJL208C IFH1P39520 1085 aa13.66□□□□□ -0.22
NUC1YJL208C YBT1P32386 1661 aa13.65□□□□□ -0.22
NUC1YJL208C TY3B-GQ99315 1547 aa13.64□□□□□ -0.23
NUC1YJL208C PDR10P51533 1564 aa13.6□□□□□ -0.23
NUC1YJL208C NUP170P38181 1502 aa13.59□□□□□ -0.23
NUC1YJL208C BUD3P25558 1636 aa13.58□□□□□ -0.24
NUC1YJL208C NUP157P40064 1391 aaKnown RBP13.57□□□□□ -0.24
NUC1YJL208C DRS2P39524 1355 aa13.56□□□□□ -0.24
NUC1YJL208C IQG1Q12280 1495 aa13.55□□□□□ -0.24
NUC1YJL208C IKI3Q06706 1349 aaKnown RBP13.54□□□□□ -0.24
NUC1YJL208C BNI1P41832 1953 aa13.51□□□□□ -0.25
NUC1YJL208C ARO1P08566 1588 aaKnown RBP13.5□□□□□ -0.25
NUC1YJL208C TRM3Q07527 1436 aa13.49□□□□□ -0.25
NUC1YJL208C DOP1Q03921 1698 aa13.47□□□□□ -0.25
NUC1YJL208C SRB8P25648 1427 aa13.41□□□□□ -0.26
NUC1YJL208C SEC7P11075 2009 aaKnown RBP13.39□□□□□ -0.27
NUC1YJL208C ITT1Q04638 464 aa13.38□□□□□ -0.27
NUC1YJL208C CHC1P22137 1653 aaKnown RBP13.37□□□□□ -0.27
NUC1YJL208C MMS1Q06211 1407 aa13.35□□□□□ -0.27
NUC1YJL208C YSP2Q06681 1438 aa13.35□□□□□ -0.27
NUC1YJL208C CKB1P43639 278 aa13.32□□□□□ -0.28
NUC1YJL208C SSM4P40318 1319 aa13.27□□□□□ -0.29
NUC1YJL208C BNR1P40450 1375 aa13.25□□□□□ -0.29
NUC1YJL208C DNF2Q12675 1612 aa13.24□□□□□ -0.29
NUC1YJL208C BUD21Q08492 214 aaPredicted RBP13.17□□□□□ -0.3
NUC1YJL208C GCN2P15442 1659 aa13.17□□□□□ -0.3
NUC1YJL208C YOR093CQ12275 1648 aa13.08□□□□□ -0.32
NUC1YJL208C DIP2Q12220 943 aaPredicted RBP13.06□□□□□ -0.32
NUC1YJL208C NUP188P52593 1655 aaKnown RBP13.05□□□□□ -0.32
NUC1YJL208C PDR5P33302 1511 aaKnown RBP13.03□□□□□ -0.32
NUC1YJL208C URN1Q06525 465 aaKnown RBP13.02□□□□□ -0.33
NUC1YJL208C PRI1P10363 409 aa13.01□□□□□ -0.33
NUC1YJL208C VMR1P38735 1592 aa12.98□□□□□ -0.33
NUC1YJL208C HAP1P0CE41 1502 aa12.98□□□□□ -0.33
NUC1YJL208C ABP1P15891 592 aaKnown RBP12.97□□□□□ -0.33
NUC1YJL208C DNF3Q12674 1656 aa12.96□□□□□ -0.34
NUC1YJL208C IML1P47170 1584 aa12.94□□□□□ -0.34
NUC1YJL208C YAP3P38749 330 aa12.93□□□□□ -0.34
NUC1YJL208C PRY3P47033 881 aa12.93□□□□□ -0.34
NUC1YJL208C ISW2Q08773 1120 aa12.9□□□□□ -0.34
NUC1YJL208C AAD16Q02895 342 aa12.88□□□□□ -0.35
NUC1YJL208C PAF1P38351 445 aa12.87□□□□□ -0.35
NUC1YJL208C IPL1P38991 367 aa12.85□□□□□ -0.35
NUC1YJL208C RAV1P47104 1357 aa12.82□□□□□ -0.36
NUC1YJL208C NOP7P53261 605 aaKnown RBP12.82□□□□□ -0.36
NUC1YJL208C RPG1P38249 964 aaKnown RBP12.81□□□□□ -0.36
NUC1YJL208C MIF2P35201 549 aa12.8□□□□□ -0.36
NUC1YJL208C BFR2Q06631 534 aaKnown RBP12.78□□□□□ -0.36
NUC1YJL208C PDR11P40550 1411 aa12.77□□□□□ -0.37
NUC1YJL208C RTC1Q08281 1341 aa12.74□□□□□ -0.37
NUC1YJL208C TYS1P36421 394 aaKnown RBP12.72□□□□□ -0.37
NUC1YJL208C MAK10Q02197 733 aa12.69□□□□□ -0.38
NUC1YJL208C AVT3P36062 692 aa12.67□□□□□ -0.38
NUC1YJL208C TY1B-NL2Q99337 1749 aaKnown RBP12.67□□□□□ -0.38
NUC1YJL208C NUP192P47054 1683 aa12.63□□□□□ -0.39
NUC1YJL208C BCK1Q01389 1478 aa12.61□□□□□ -0.39
NUC1YJL208C USO1P25386 1790 aa12.58□□□□□ -0.4
NUC1YJL208C ESL2P36168 1195 aa12.56□□□□□ -0.4
NUC1YJL208C TY3B-IQ7LHG5 1498 aaKnown RBP12.54□□□□□ -0.4
NUC1YJL208C CFT1Q06632 1357 aaKnown RBP12.52□□□□□ -0.41
NUC1YJL208C ALD4P46367 519 aaKnown RBP12.51□□□□□ -0.41
NUC1YJL208C SCT1P32784 759 aa12.5□□□□□ -0.41
NUC1YJL208C NAP1P25293 417 aaKnown RBP12.49□□□□□ -0.41
NUC1YJL208C MRX12P47084 519 aa12.49□□□□□ -0.41
NUC1YJL208C YMR196WQ04336 1088 aa12.48□□□□□ -0.41
NUC1YJL208C KRE5P22023 1365 aa12.46□□□□□ -0.41
NUC1YJL208C RAD9P14737 1309 aa12.46□□□□□ -0.41
NUC1YJL208C TAF5P38129 798 aa12.46□□□□□ -0.41
NUC1YJL208C POL5P39985 1022 aaKnown RBP12.45□□□□□ -0.42
NUC1YJL208C CAB1Q04430 367 aa12.41□□□□□ -0.42
NUC1YJL208C YLR419WQ06698 1435 aaKnown RBP12.4□□□□□ -0.42
NUC1YJL208C RIA1P53893 1110 aa12.4□□□□□ -0.42
NUC1YJL208C TSR3Q12094 313 aaKnown RBP12.39□□□□□ -0.43
NUC1YJL208C YFR006WP43590 535 aa12.37□□□□□ -0.43
NUC1YJL208C TAF8Q03750 510 aa12.37□□□□□ -0.43
NUC1YJL208C KIP3P53086 805 aaKnown RBP12.36□□□□□ -0.43
NUC1YJL208C YNR029CP53729 429 aaKnown RBP12.35□□□□□ -0.43
NUC1YJL208C SPE2P21182 396 aa12.34□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms