RNA–Protein interactions for RNA: YJL121C

RPE1, Transcript of D-ribulose-5-phosphate 3-epimerase, yeastyeast

Gene RPE1, Length 717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPE1YJL121C ABP1P15891 592 aaKnown RBP9.61□□□□□ -0.87
RPE1YJL121C SPP41P38904 1435 aa9.61□□□□□ -0.87
RPE1YJL121C VPS15P22219 1454 aa9.6□□□□□ -0.87
RPE1YJL121C MMS1Q06211 1407 aa9.6□□□□□ -0.87
RPE1YJL121C SMC4Q12267 1418 aa9.6□□□□□ -0.87
RPE1YJL121C VTH1P40438 1549 aa9.57□□□□□ -0.88
RPE1YJL121C VTH2P40890 1549 aa9.57□□□□□ -0.88
RPE1YJL121C IRC20Q06554 1556 aa9.56□□□□□ -0.88
RPE1YJL121C DRS2P39524 1355 aa9.54□□□□□ -0.88
RPE1YJL121C TSC11P40061 1430 aa9.52□□□□□ -0.89
RPE1YJL121C DNF2Q12675 1612 aa9.52□□□□□ -0.89
RPE1YJL121C YFR006WP43590 535 aa9.5□□□□□ -0.89
RPE1YJL121C SPO14P36126 1683 aa9.46□□□□□ -0.89
RPE1YJL121C DOP1Q03921 1698 aa9.45□□□□□ -0.9
RPE1YJL121C MYO4P32492 1471 aa9.45□□□□□ -0.9
RPE1YJL121C NUP170P38181 1502 aa9.45□□□□□ -0.9
RPE1YJL121C SNQ2P32568 1501 aaKnown RBP9.44□□□□□ -0.9
RPE1YJL121C ULS1Q08562 1619 aa9.43□□□□□ -0.9
RPE1YJL121C SNT2P53127 1403 aa9.37□□□□□ -0.91
RPE1YJL121C MLP2P40457 1679 aa9.34□□□□□ -0.91
RPE1YJL121C MET10P39692 1035 aa9.3□□□□□ -0.92
RPE1YJL121C YTA7P40340 1379 aa9.28□□□□□ -0.92
RPE1YJL121C YOR093CQ12275 1648 aa9.28□□□□□ -0.92
RPE1YJL121C PDR12Q02785 1511 aa9.27□□□□□ -0.93
RPE1YJL121C GDB1Q06625 1536 aa9.27□□□□□ -0.93
RPE1YJL121C RTT106P40161 455 aa9.27□□□□□ -0.93
RPE1YJL121C STH1P32597 1359 aa9.26□□□□□ -0.93
RPE1YJL121C PDR10P51533 1564 aa9.24□□□□□ -0.93
RPE1YJL121C IQG1Q12280 1495 aa9.22□□□□□ -0.93
RPE1YJL121C CHC1P22137 1653 aaKnown RBP9.21□□□□□ -0.93
RPE1YJL121C PDR15Q04182 1529 aaKnown RBP9.21□□□□□ -0.94
RPE1YJL121C NUP157P40064 1391 aaKnown RBP9.2□□□□□ -0.94
RPE1YJL121C TRM3Q07527 1436 aa9.19□□□□□ -0.94
RPE1YJL121C BUD3P25558 1636 aa9.16□□□□□ -0.94
RPE1YJL121C ARO1P08566 1588 aaKnown RBP9.16□□□□□ -0.94
RPE1YJL121C DNF3Q12674 1656 aa9.12□□□□□ -0.95
RPE1YJL121C SAS10Q12136 610 aaPredicted RBP9.09□□□□□ -0.95
RPE1YJL121C YBT1P32386 1661 aa9.07□□□□□ -0.96
RPE1YJL121C SEC7P11075 2009 aaKnown RBP9.05□□□□□ -0.96
RPE1YJL121C USO1P25386 1790 aa9.04□□□□□ -0.96
RPE1YJL121C IFH1P39520 1085 aa9.03□□□□□ -0.96
RPE1YJL121C TY3B-GQ99315 1547 aa8.98□□□□□ -0.97
RPE1YJL121C GEA1P47102 1408 aaPredicted RBP8.93□□□□□ -0.98
RPE1YJL121C CAT8P39113 1433 aa8.92□□□□□ -0.98
RPE1YJL121C CKB1P43639 278 aa8.91□□□□□ -0.98
RPE1YJL121C TAF7Q05021 590 aa8.91□□□□□ -0.98
RPE1YJL121C BNR1P40450 1375 aa8.9□□□□□ -0.98
RPE1YJL121C YAP3P38749 330 aa8.9□□□□□ -0.98
RPE1YJL121C YSP2Q06681 1438 aa8.89□□□□□ -0.99
RPE1YJL121C MAK10Q02197 733 aa8.85□□□□□ -0.99
RPE1YJL121C IML1P47170 1584 aa8.8□□□□□ -1
RPE1YJL121C NUP188P52593 1655 aaKnown RBP8.78□□□□□ -1
RPE1YJL121C URN1Q06525 465 aaKnown RBP8.74□□□□□ -1.01
RPE1YJL121C TY1B-NL2Q99337 1749 aaKnown RBP8.73□□□□□ -1.01
RPE1YJL121C VMR1P38735 1592 aa8.7□□□□□ -1.02
RPE1YJL121C SRB8P25648 1427 aa8.7□□□□□ -1.02
RPE1YJL121C THI12P42883 340 aa8.68□□□□□ -1.02
RPE1YJL121C THI5P43534 340 aa8.68□□□□□ -1.02
RPE1YJL121C THI11P47183 340 aa8.68□□□□□ -1.02
RPE1YJL121C THI13Q07748 340 aa8.68□□□□□ -1.02
RPE1YJL121C IPL1P38991 367 aa8.67□□□□□ -1.02
RPE1YJL121C TYS1P36421 394 aaKnown RBP8.66□□□□□ -1.02
RPE1YJL121C BUD21Q08492 214 aaPredicted RBP8.63□□□□□ -1.03
RPE1YJL121C YMR196WQ04336 1088 aa8.62□□□□□ -1.03
RPE1YJL121C HAP1P0CE41 1502 aa8.62□□□□□ -1.03
RPE1YJL121C PDR5P33302 1511 aaKnown RBP8.61□□□□□ -1.03
RPE1YJL121C GLN1P32288 370 aaKnown RBP8.47□□□□□ -1.05
RPE1YJL121C APP1P53933 587 aa8.47□□□□□ -1.05
RPE1YJL121C KRE5P22023 1365 aa8.47□□□□□ -1.05
RPE1YJL121C GCN2P15442 1659 aa8.46□□□□□ -1.05
RPE1YJL121C PDR11P40550 1411 aa8.46□□□□□ -1.06
RPE1YJL121C YAH1Q12184 172 aaKnown RBP8.45□□□□□ -1.06
RPE1YJL121C IKI3Q06706 1349 aaKnown RBP8.45□□□□□ -1.06
RPE1YJL121C RIA1P53893 1110 aa8.42□□□□□ -1.06
RPE1YJL121C NUP192P47054 1683 aa8.42□□□□□ -1.06
RPE1YJL121C YIL055CP40523 627 aaKnown RBP8.4□□□□□ -1.06
RPE1YJL121C MRX12P47084 519 aa8.4□□□□□ -1.06
RPE1YJL121C CFT1Q06632 1357 aaKnown RBP8.39□□□□□ -1.07
RPE1YJL121C PTP3P40048 928 aa8.38□□□□□ -1.07
RPE1YJL121C SSM4P40318 1319 aa8.37□□□□□ -1.07
RPE1YJL121C YRF1-2P40105 1681 aa8.37□□□□□ -1.07
RPE1YJL121C YNR029CP53729 429 aaKnown RBP8.36□□□□□ -1.07
RPE1YJL121C BCK1Q01389 1478 aa8.36□□□□□ -1.07
RPE1YJL121C REB1P21538 810 aa8.34□□□□□ -1.07
RPE1YJL121C RRP5Q05022 1729 aaKnown RBP8.34□□□□□ -1.07
RPE1YJL121C TY3B-IQ7LHG5 1498 aaKnown RBP8.32□□□□□ -1.08
RPE1YJL121C CAB1Q04430 367 aa8.3□□□□□ -1.08
RPE1YJL121C ENT1Q12518 454 aa8.3□□□□□ -1.08
RPE1YJL121C TY4B-HP0C2J7 1802 aa8.29□□□□□ -1.08
RPE1YJL121C TY4B-JP47024 1803 aa8.29□□□□□ -1.08
RPE1YJL121C RAD9P14737 1309 aa8.29□□□□□ -1.08
RPE1YJL121C NSR1P27476 414 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
RPE1YJL121C YMR074CQ04773 145 aa8.27□□□□□ -1.09
RPE1YJL121C ENV9Q08651 330 aa8.27□□□□□ -1.09
RPE1YJL121C PRI1P10363 409 aa8.26□□□□□ -1.09
RPE1YJL121C RAV1P47104 1357 aa8.24□□□□□ -1.09
RPE1YJL121C IMH1Q06704 911 aaKnown RBP8.22□□□□□ -1.09
RPE1YJL121C PAF1P38351 445 aa8.21□□□□□ -1.1
RPE1YJL121C ALD4P46367 519 aaKnown RBP8.21□□□□□ -1.1
RPE1YJL121C URB1P34241 1764 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms