RNA–Protein interactions for RNA: YJL074C

SMC3, Transcript of Subunit of the multiprotein cohesin complex, yeast

Gene SMC3, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC3	YJL074C	MTC1	P47018	478 aa	Known RBP	4.81	□□□□□ -1.64
SMC3	YJL074C	TOP2	P06786	1428 aa	Known RBP	4.8	□□□□□ -1.64
SMC3	YJL074C	STH1	P32597	1359 aa		4.8	□□□□□ -1.64
SMC3	YJL074C	LEO1	P38439	464 aa		4.79	□□□□□ -1.64
SMC3	YJL074C	RPO21	P04050	1733 aa	Known RBP	4.79	□□□□□ -1.64
SMC3	YJL074C	PDR15	Q04182	1529 aa	Known RBP	4.78	□□□□□ -1.64
SMC3	YJL074C	SNT2	P53127	1403 aa		4.76	□□□□□ -1.65
SMC3	YJL074C	SSM4	P40318	1319 aa		4.76	□□□□□ -1.65
SMC3	YJL074C	ENP1	P38333	483 aa	Known RBP	4.75	□□□□□ -1.65
SMC3	YJL074C	RSE1	Q04693	1361 aa	Known RBP	4.75	□□□□□ -1.65
SMC3	YJL074C	NTE1	Q04958	1679 aa		4.75	□□□□□ -1.65
SMC3	YJL074C	RPA190	P10964	1664 aa	Known RBP	4.75	□□□□□ -1.65
SMC3	YJL074C	PDR12	Q02785	1511 aa		4.75	□□□□□ -1.65
SMC3	YJL074C	MDS3	P53094	1487 aa		4.73	□□□□□ -1.65
SMC3	YJL074C	SPO14	P36126	1683 aa		4.72	□□□□□ -1.65
SMC3	YJL074C	YLR419W	Q06698	1435 aa	Known RBP	4.72	□□□□□ -1.65
SMC3	YJL074C	DMA1	P38823	416 aa		4.71	□□□□□ -1.66
SMC3	YJL074C	AVT3	P36062	692 aa		4.7	□□□□□ -1.66
SMC3	YJL074C	SEC3	P33332	1336 aa	Known RBP	4.7	□□□□□ -1.66
SMC3	YJL074C	GEA1	P47102	1408 aa	Predicted RBP	4.69	□□□□□ -1.66
SMC3	YJL074C	TSC11	P40061	1430 aa		4.69	□□□□□ -1.66
SMC3	YJL074C	PAN1	P32521	1480 aa		4.68	□□□□□ -1.66
SMC3	YJL074C	CDC25	P04821	1589 aa		4.68	□□□□□ -1.66
SMC3	YJL074C	VTH1	P40438	1549 aa		4.68	□□□□□ -1.66
SMC3	YJL074C	VTH2	P40890	1549 aa		4.68	□□□□□ -1.66
SMC3	YJL074C	ARO1	P08566	1588 aa	Known RBP	4.67	□□□□□ -1.66
SMC3	YJL074C	DNF1	P32660	1571 aa		4.67	□□□□□ -1.66
SMC3	YJL074C	YOR093C	Q12275	1648 aa		4.66	□□□□□ -1.66
SMC3	YJL074C	NUP159	P40477	1460 aa		4.66	□□□□□ -1.66
SMC3	YJL074C	POL5	P39985	1022 aa	Known RBP	4.65	□□□□□ -1.66
SMC3	YJL074C	YRF1-1	P0CX20	1796 aa		4.65	□□□□□ -1.67
SMC3	YJL074C	YRF1-5	P0CX21	1796 aa		4.65	□□□□□ -1.67
SMC3	YJL074C	YRF1-8	P0CX22	1796 aa		4.65	□□□□□ -1.67
SMC3	YJL074C	SRB8	P25648	1427 aa		4.65	□□□□□ -1.67
SMC3	YJL074C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.65	□□□□□ -1.67
SMC3	YJL074C	CHC1	P22137	1653 aa	Known RBP	4.65	□□□□□ -1.67
SMC3	YJL074C	IQG1	Q12280	1495 aa		4.64	□□□□□ -1.67
SMC3	YJL074C	SAS10	Q12136	610 aa	Predicted RBP	4.64	□□□□□ -1.67
SMC3	YJL074C	GDB1	Q06625	1536 aa		4.64	□□□□□ -1.67
SMC3	YJL074C	DOP1	Q03921	1698 aa		4.63	□□□□□ -1.67
SMC3	YJL074C	URN1	Q06525	465 aa	Known RBP	4.63	□□□□□ -1.67
SMC3	YJL074C	VPS15	P22219	1454 aa		4.63	□□□□□ -1.67
SMC3	YJL074C	SPT7	P35177	1332 aa		4.62	□□□□□ -1.67
SMC3	YJL074C	PRS1	P32895	427 aa	Known RBP	4.61	□□□□□ -1.67
SMC3	YJL074C	NUP192	P47054	1683 aa		4.61	□□□□□ -1.67
SMC3	YJL074C	CAT8	P39113	1433 aa		4.58	□□□□□ -1.68
SMC3	YJL074C	GEA2	P39993	1459 aa	Known RBP	4.57	□□□□□ -1.68
SMC3	YJL074C	NAP1	P25293	417 aa	Known RBP	4.57	□□□□□ -1.68
SMC3	YJL074C	DNF2	Q12675	1612 aa		4.55	□□□□□ -1.68
SMC3	YJL074C	VMR1	P38735	1592 aa		4.54	□□□□□ -1.68
SMC3	YJL074C	DNF3	Q12674	1656 aa		4.54	□□□□□ -1.68
SMC3	YJL074C	EBP2	P36049	427 aa	Known RBP	4.53	□□□□□ -1.68
SMC3	YJL074C	MHP1	P43638	1398 aa		4.53	□□□□□ -1.68
SMC3	YJL074C	SNF2	P22082	1703 aa		4.53	□□□□□ -1.68
SMC3	YJL074C	RTT106	P40161	455 aa		4.53	□□□□□ -1.68
SMC3	YJL074C	IOC4	Q04213	475 aa		4.51	□□□□□ -1.69
SMC3	YJL074C	CAB3	P36076	571 aa		4.5	□□□□□ -1.69
SMC3	YJL074C	IML1	P47170	1584 aa		4.5	□□□□□ -1.69
SMC3	YJL074C	IFH1	P39520	1085 aa		4.49	□□□□□ -1.69
SMC3	YJL074C	YPR148C	Q06523	435 aa		4.49	□□□□□ -1.69
SMC3	YJL074C	DIP2	Q12220	943 aa	Predicted RBP	4.48	□□□□□ -1.69
SMC3	YJL074C	NUP188	P52593	1655 aa	Known RBP	4.47	□□□□□ -1.69
SMC3	YJL074C	BUD3	P25558	1636 aa		4.47	□□□□□ -1.69
SMC3	YJL074C	IME2	P32581	645 aa		4.47	□□□□□ -1.69
SMC3	YJL074C	CFT1	Q06632	1357 aa	Known RBP	4.47	□□□□□ -1.69
SMC3	YJL074C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.46	□□□□□ -1.69
SMC3	YJL074C	AIM44	Q99299	758 aa		4.46	□□□□□ -1.7
SMC3	YJL074C	OPY1	P38271	328 aa		4.45	□□□□□ -1.7
SMC3	YJL074C	MET5	P47169	1442 aa		4.45	□□□□□ -1.7
SMC3	YJL074C	LEU3	P08638	886 aa		4.44	□□□□□ -1.7
SMC3	YJL074C	SEC7	P11075	2009 aa	Known RBP	4.44	□□□□□ -1.7
SMC3	YJL074C	PSD2	P53037	1138 aa	Known RBP	4.43	□□□□□ -1.7
SMC3	YJL074C	MMS1	Q06211	1407 aa		4.43	□□□□□ -1.7
SMC3	YJL074C	HAP1	P0CE41	1502 aa		4.43	□□□□□ -1.7
SMC3	YJL074C	MLP1	Q02455	1875 aa	Known RBP	4.43	□□□□□ -1.7
SMC3	YJL074C	YSP2	Q06681	1438 aa		4.42	□□□□□ -1.7
SMC3	YJL074C	YIR014W	P40570	242 aa		4.42	□□□□□ -1.7
SMC3	YJL074C	ORC1	P54784	914 aa	Predicted RBP	4.42	□□□□□ -1.7
SMC3	YJL074C	USO1	P25386	1790 aa		4.42	□□□□□ -1.7
SMC3	YJL074C	CLC1	P17891	233 aa		4.41	□□□□□ -1.7
SMC3	YJL074C	YRB30	P53107	440 aa	Predicted RBP	4.41	□□□□□ -1.7
SMC3	YJL074C	LTE1	P07866	1435 aa		4.4	□□□□□ -1.7
SMC3	YJL074C	RPP0	P05317	312 aa	Known RBP	4.4	□□□□□ -1.71
SMC3	YJL074C	APC1	P53886	1748 aa		4.4	□□□□□ -1.71
SMC3	YJL074C	TCB2	P48231	1178 aa		4.39	□□□□□ -1.71
SMC3	YJL074C	ABP1	P15891	592 aa	Known RBP	4.39	□□□□□ -1.71
SMC3	YJL074C	NUP157	P40064	1391 aa	Known RBP	4.38	□□□□□ -1.71
SMC3	YJL074C	PDR11	P40550	1411 aa		4.38	□□□□□ -1.71
SMC3	YJL074C	RAV1	P47104	1357 aa		4.37	□□□□□ -1.71
SMC3	YJL074C	DUR1,2	P32528	1835 aa	Known RBP	4.36	□□□□□ -1.71
SMC3	YJL074C	RPC31	P17890	251 aa		4.36	□□□□□ -1.71
SMC3	YJL074C	NOP7	P53261	605 aa	Known RBP	4.36	□□□□□ -1.71
SMC3	YJL074C	SNF7	P39929	240 aa	Known RBP	4.35	□□□□□ -1.71
SMC3	YJL074C	RTC1	Q08281	1341 aa		4.35	□□□□□ -1.71
SMC3	YJL074C	CDC45	Q08032	650 aa		4.35	□□□□□ -1.71
SMC3	YJL074C	TRM3	Q07527	1436 aa		4.35	□□□□□ -1.71
SMC3	YJL074C	YIL177C	P40434	1758 aa		4.34	□□□□□ -1.71
SMC3	YJL074C	YJL225C	P40889	1758 aa		4.34	□□□□□ -1.71
SMC3	YJL074C	EDE1	P34216	1381 aa		4.33	□□□□□ -1.72
SMC3	YJL074C	NST1	P53935	1240 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 155.9 ms