RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C KRI1P42846 591 aaKnown RBP3.48□□□□□ -1.85
PRP8YHR165C SAS3P34218 831 aa3.47□□□□□ -1.85
PRP8YHR165C TY3B-IQ7LHG5 1498 aaKnown RBP3.47□□□□□ -1.85
PRP8YHR165C SWD1P39706 426 aa3.47□□□□□ -1.85
PRP8YHR165C HSP82P02829 709 aaKnown RBP3.47□□□□□ -1.85
PRP8YHR165C TAF2P23255 1407 aa3.47□□□□□ -1.85
PRP8YHR165C SWR1Q05471 1514 aa3.47□□□□□ -1.85
PRP8YHR165C ESP1Q03018 1630 aa3.46□□□□□ -1.85
PRP8YHR165C CDC25P04821 1589 aa3.46□□□□□ -1.86
PRP8YHR165C PDR12Q02785 1511 aa3.46□□□□□ -1.86
PRP8YHR165C YSP2Q06681 1438 aa3.46□□□□□ -1.86
PRP8YHR165C CAT8P39113 1433 aa3.46□□□□□ -1.86
PRP8YHR165C YMR124WP39523 943 aaKnown RBP3.46□□□□□ -1.86
PRP8YHR165C NOP53Q12080 455 aaKnown RBP3.46□□□□□ -1.86
PRP8YHR165C EBP2P36049 427 aaKnown RBP3.45□□□□□ -1.86
PRP8YHR165C NOP2P40991 618 aaKnown RBP3.44□□□□□ -1.86
PRP8YHR165C RPS0AP32905 252 aaKnown RBP3.44□□□□□ -1.86
PRP8YHR165C NOC3Q07896 663 aaPredicted RBP3.44□□□□□ -1.86
PRP8YHR165C CWC22P53333 577 aaKnown RBP3.44□□□□□ -1.86
PRP8YHR165C ATG2P53855 1592 aa3.44□□□□□ -1.86
PRP8YHR165C BPT1P14772 1559 aa3.43□□□□□ -1.86
PRP8YHR165C YPR148CQ06523 435 aa3.43□□□□□ -1.86
PRP8YHR165C ESC1Q03661 1658 aaKnown RBP3.43□□□□□ -1.86
PRP8YHR165C EAF7P53911 425 aaKnown RBP3.43□□□□□ -1.86
PRP8YHR165C RKM3P38222 552 aa3.43□□□□□ -1.86
PRP8YHR165C DIP2Q12220 943 aaPredicted RBP3.43□□□□□ -1.86
PRP8YHR165C ABP1P15891 592 aaKnown RBP3.43□□□□□ -1.86
PRP8YHR165C GEA2P39993 1459 aaKnown RBP3.43□□□□□ -1.86
PRP8YHR165C TY3B-GQ99315 1547 aa3.43□□□□□ -1.86
PRP8YHR165C OCA1P50946 238 aaPredicted RBP3.43□□□□□ -1.86
PRP8YHR165C PDR15Q04182 1529 aaKnown RBP3.42□□□□□ -1.86
PRP8YHR165C ARO1P08566 1588 aaKnown RBP3.42□□□□□ -1.86
PRP8YHR165C VPS72Q03388 795 aa3.42□□□□□ -1.86
PRP8YHR165C POL4P25615 582 aa3.42□□□□□ -1.86
PRP8YHR165C TSC11P40061 1430 aa3.41□□□□□ -1.86
PRP8YHR165C RED1P14291 827 aa3.41□□□□□ -1.86
PRP8YHR165C NSR1P27476 414 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
PRP8YHR165C GDB1Q06625 1536 aa3.4□□□□□ -1.86
PRP8YHR165C RKR1Q04781 1562 aa3.4□□□□□ -1.87
PRP8YHR165C YFR016CP43597 1233 aaKnown RBP3.4□□□□□ -1.87
PRP8YHR165C MMS1Q06211 1407 aa3.39□□□□□ -1.87
PRP8YHR165C YIR014WP40570 242 aa3.39□□□□□ -1.87
PRP8YHR165C FAF1P40546 346 aaPredicted RBP3.38□□□□□ -1.87
PRP8YHR165C HOS4P40480 1083 aa3.38□□□□□ -1.87
PRP8YHR165C AIM7Q12156 149 aa3.38□□□□□ -1.87
PRP8YHR165C COG8Q04632 607 aa3.38□□□□□ -1.87
PRP8YHR165C FAR11P53917 953 aa3.38□□□□□ -1.87
PRP8YHR165C VPS15P22219 1454 aa3.37□□□□□ -1.87
PRP8YHR165C MLP2P40457 1679 aa3.37□□□□□ -1.87
PRP8YHR165C DSL1P53847 754 aa3.37□□□□□ -1.87
PRP8YHR165C YGL081WP53156 320 aa3.37□□□□□ -1.87
PRP8YHR165C FPR4Q06205 392 aaPredicted RBP3.37□□□□□ -1.87
PRP8YHR165C OSW7P43611 510 aa3.36□□□□□ -1.87
PRP8YHR165C ULS1Q08562 1619 aa3.36□□□□□ -1.87
PRP8YHR165C MHP1P43638 1398 aa3.35□□□□□ -1.87
PRP8YHR165C SSM4P40318 1319 aa3.35□□□□□ -1.87
PRP8YHR165C PAF1P38351 445 aa3.35□□□□□ -1.87
PRP8YHR165C YLH47Q06493 454 aa3.35□□□□□ -1.87
PRP8YHR165C SIS2P36024 562 aa3.34□□□□□ -1.87
PRP8YHR165C SET2P46995 733 aaKnown RBP3.34□□□□□ -1.87
PRP8YHR165C MDM38Q08179 573 aa3.34□□□□□ -1.87
PRP8YHR165C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
PRP8YHR165C MIC60P36112 540 aa3.34□□□□□ -1.87
PRP8YHR165C TOA1P32773 286 aa3.34□□□□□ -1.87
PRP8YHR165C NPL6P32832 435 aa3.34□□□□□ -1.88
PRP8YHR165C CBF5P33322 483 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
PRP8YHR165C NST1P53935 1240 aa3.34□□□□□ -1.88
PRP8YHR165C RPP0P05317 312 aaKnown RBP3.34□□□□□ -1.88
PRP8YHR165C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
PRP8YHR165C RLF2Q12495 606 aa3.33□□□□□ -1.88
PRP8YHR165C ESF2P53743 316 aaKnown RBP3.33□□□□□ -1.88
PRP8YHR165C MAK16P10962 306 aaPredicted RBP3.33□□□□□ -1.88
PRP8YHR165C VHS3Q08438 674 aa3.33□□□□□ -1.88
PRP8YHR165C CHZ1P40019 153 aaPredicted RBP3.33□□□□□ -1.88
PRP8YHR165C KOG1P38873 1557 aa3.33□□□□□ -1.88
PRP8YHR165C SWE1P32944 819 aa3.33□□□□□ -1.88
PRP8YHR165C IML1P47170 1584 aa3.33□□□□□ -1.88
PRP8YHR165C GCN2P15442 1659 aa3.32□□□□□ -1.88
PRP8YHR165C PAN1P32521 1480 aa3.32□□□□□ -1.88
PRP8YHR165C OCA5P38738 679 aa3.32□□□□□ -1.88
PRP8YHR165C TCB2P48231 1178 aa3.32□□□□□ -1.88
PRP8YHR165C PRS1P32895 427 aaKnown RBP3.32□□□□□ -1.88
PRP8YHR165C RPG1P38249 964 aaKnown RBP3.31□□□□□ -1.88
PRP8YHR165C MSH4P40965 878 aaPredicted RBP3.31□□□□□ -1.88
PRP8YHR165C VTH1P40438 1549 aa3.31□□□□□ -1.88
PRP8YHR165C VTH2P40890 1549 aa3.31□□□□□ -1.88
PRP8YHR165C EDE1P34216 1381 aa3.31□□□□□ -1.88
PRP8YHR165C MDS3P53094 1487 aa3.31□□□□□ -1.88
PRP8YHR165C LOC1P43586 204 aaPredicted RBP3.31□□□□□ -1.88
PRP8YHR165C SCT1P32784 759 aa3.31□□□□□ -1.88
PRP8YHR165C SMY2P32909 740 aaKnown RBP3.31□□□□□ -1.88
PRP8YHR165C SNU71P53207 620 aaKnown RBP3.31□□□□□ -1.88
PRP8YHR165C RRN3P36070 627 aa3.3□□□□□ -1.88
PRP8YHR165C TPM1P17536 199 aaKnown RBP3.3□□□□□ -1.88
PRP8YHR165C RPN1P38764 993 aaKnown RBP3.3□□□□□ -1.88
PRP8YHR165C CKB1P43639 278 aa3.3□□□□□ -1.88
PRP8YHR165C SFB2P53953 876 aa3.3□□□□□ -1.88
PRP8YHR165C GRX3Q03835 250 aa3.3□□□□□ -1.88
PRP8YHR165C RIM101P33400 625 aa3.29□□□□□ -1.88
PRP8YHR165C YJU2P28320 278 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms