RNA–Protein interactions for RNA: YHR100C

GEP4, Transcript of Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase), yeastyeast

Gene GEP4, Length 558 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEP4YHR100C MIF2P35201 549 aa5□□□□□ -1.61
GEP4YHR100C RPS0BP46654 252 aaKnown RBP5□□□□□ -1.61
GEP4YHR100C MNN4P36044 1178 aa4.99□□□□□ -1.61
GEP4YHR100C DCW1P36091 449 aa4.99□□□□□ -1.61
GEP4YHR100C GYP5Q12344 894 aa4.99□□□□□ -1.61
GEP4YHR100C SAM3Q08986 587 aa4.98□□□□□ -1.61
GEP4YHR100C NCR1Q12200 1170 aa4.97□□□□□ -1.61
GEP4YHR100C RAM2P29703 316 aa4.96□□□□□ -1.62
GEP4YHR100C TFG1P41895 735 aaPredicted RBP4.95□□□□□ -1.62
GEP4YHR100C KRI1P42846 591 aaKnown RBP4.95□□□□□ -1.62
GEP4YHR100C YNL035CP53962 389 aaKnown RBP4.95□□□□□ -1.62
GEP4YHR100C HTA1P04911 132 aaKnown RBP4.94□□□□□ -1.62
GEP4YHR100C HTA2P04912 132 aa4.94□□□□□ -1.62
GEP4YHR100C MAK11P20484 414 aaKnown RBP4.93□□□□□ -1.62
GEP4YHR100C TOP1P04786 769 aa4.92□□□□□ -1.62
GEP4YHR100C RGA1P39083 1007 aa4.92□□□□□ -1.62
GEP4YHR100C GRE2Q12068 342 aaKnown RBP4.92□□□□□ -1.62
GEP4YHR100C SEC61P32915 480 aa4.91□□□□□ -1.62
GEP4YHR100C YEL023CP39992 682 aa4.91□□□□□ -1.62
GEP4YHR100C ATH1P48016 1211 aa4.91□□□□□ -1.62
GEP4YHR100C ABP1P15891 592 aaKnown RBP4.9□□□□□ -1.63
GEP4YHR100C COQ8P27697 501 aa4.89□□□□□ -1.63
GEP4YHR100C PTC3P34221 468 aaKnown RBP4.89□□□□□ -1.63
GEP4YHR100C EDS1P38073 919 aa4.89□□□□□ -1.63
GEP4YHR100C SAP30P38429 201 aa4.89□□□□□ -1.63
GEP4YHR100C IFH1P39520 1085 aa4.89□□□□□ -1.63
GEP4YHR100C JIP4Q03361 876 aa4.89□□□□□ -1.63
GEP4YHR100C PTC4P38089 393 aa4.88□□□□□ -1.63
GEP4YHR100C SNU71P53207 620 aaKnown RBP4.88□□□□□ -1.63
GEP4YHR100C NOP2P40991 618 aaKnown RBP4.87□□□□□ -1.63
GEP4YHR100C DAN4P47179 1161 aa4.87□□□□□ -1.63
GEP4YHR100C GUT1P32190 709 aa4.85□□□□□ -1.63
GEP4YHR100C PML39Q03760 334 aa4.83□□□□□ -1.64
GEP4YHR100C YDL129WQ07555 291 aa4.83□□□□□ -1.64
GEP4YHR100C ORC1P54784 914 aaPredicted RBP4.81□□□□□ -1.64
GEP4YHR100C BCK2P33306 851 aa4.79□□□□□ -1.64
GEP4YHR100C MID1P41821 548 aa4.78□□□□□ -1.64
GEP4YHR100C LEU3P08638 886 aa4.77□□□□□ -1.65
GEP4YHR100C SOL3P38858 249 aa4.77□□□□□ -1.65
GEP4YHR100C SET1P38827 1080 aaKnown RBP4.76□□□□□ -1.65
GEP4YHR100C ELP4Q02884 456 aaKnown RBP4.76□□□□□ -1.65
GEP4YHR100C PEX29Q03370 554 aa4.76□□□□□ -1.65
GEP4YHR100C CHL1P22516 861 aaPredicted RBP4.75□□□□□ -1.65
GEP4YHR100C DEF1P35732 738 aaKnown RBP4.75□□□□□ -1.65
GEP4YHR100C PRE3P38624 215 aa4.75□□□□□ -1.65
GEP4YHR100C CWC22P53333 577 aaKnown RBP4.74□□□□□ -1.65
GEP4YHR100C MDG1P53885 366 aa4.74□□□□□ -1.65
GEP4YHR100C YDR344CQ05510 147 aa4.74□□□□□ -1.65
GEP4YHR100C MPH3P0CE00 602 aa4.73□□□□□ -1.65
GEP4YHR100C YGR273CP53329 174 aa4.73□□□□□ -1.65
GEP4YHR100C NOP53Q12080 455 aaKnown RBP4.73□□□□□ -1.65
GEP4YHR100C MON2P48563 1636 aaPredicted RBP4.72□□□□□ -1.65
GEP4YHR100C AI4P03878 556 aa4.72□□□□□ -1.65
GEP4YHR100C BRL1P38770 471 aa4.72□□□□□ -1.65
GEP4YHR100C NST1P53935 1240 aa4.72□□□□□ -1.65
GEP4YHR100C RLF2Q12495 606 aa4.71□□□□□ -1.66
GEP4YHR100C INO80P53115 1489 aa4.7□□□□□ -1.66
GEP4YHR100C SUB1P54000 292 aaKnown RBP4.7□□□□□ -1.66
GEP4YHR100C VRP1P37370 817 aa4.69□□□□□ -1.66
GEP4YHR100C ILV3P39522 585 aaKnown RBP4.69□□□□□ -1.66
GEP4YHR100C PSH1Q12161 406 aa4.69□□□□□ -1.66
GEP4YHR100C GIN4Q12263 1142 aa4.69□□□□□ -1.66
GEP4YHR100C FPR3P38911 411 aaKnown RBP4.68□□□□□ -1.66
GEP4YHR100C DMA2P53924 522 aa4.68□□□□□ -1.66
GEP4YHR100C VPS72Q03388 795 aa4.68□□□□□ -1.66
GEP4YHR100C RLP24Q07915 199 aaKnown RBP4.68□□□□□ -1.66
GEP4YHR100C ASF1P32447 279 aa4.67□□□□□ -1.66
GEP4YHR100C VHR2P40041 505 aa4.67□□□□□ -1.66
GEP4YHR100C ARH1P48360 493 aa4.67□□□□□ -1.66
GEP4YHR100C HIF1Q12373 385 aa4.67□□□□□ -1.66
GEP4YHR100C TOA1P32773 286 aa4.66□□□□□ -1.66
GEP4YHR100C SLI15P38283 698 aa4.66□□□□□ -1.66
GEP4YHR100C HSP82P02829 709 aaKnown RBP4.65□□□□□ -1.67
GEP4YHR100C KEX1P09620 729 aa4.65□□□□□ -1.67
GEP4YHR100C RPS0AP32905 252 aaKnown RBP4.65□□□□□ -1.67
GEP4YHR100C RPN1P38764 993 aaKnown RBP4.65□□□□□ -1.67
GEP4YHR100C NUG1P40010 520 aaKnown RBP4.65□□□□□ -1.67
GEP4YHR100C HAP5Q02516 242 aa4.65□□□□□ -1.67
GEP4YHR100C MPC54Q08550 464 aa4.65□□□□□ -1.67
GEP4YHR100C SWE1P32944 819 aa4.64□□□□□ -1.67
GEP4YHR100C NMA111P53920 997 aa4.64□□□□□ -1.67
GEP4YHR100C PLP2Q12017 286 aa4.64□□□□□ -1.67
GEP4YHR100C SAS10Q12136 610 aaPredicted RBP4.64□□□□□ -1.67
GEP4YHR100C SPT23P35210 1082 aa4.63□□□□□ -1.67
GEP4YHR100C UBP14P38237 781 aaKnown RBP4.62□□□□□ -1.67
GEP4YHR100C DPL1Q05567 589 aa4.62□□□□□ -1.67
GEP4YHR100C YLR326WQ06170 240 aaKnown RBP4.62□□□□□ -1.67
GEP4YHR100C PTC2P39966 464 aaKnown RBP4.61□□□□□ -1.67
GEP4YHR100C RAD54P32863 898 aa4.6□□□□□ -1.67
GEP4YHR100C KIC1P38692 1080 aa4.6□□□□□ -1.67
GEP4YHR100C VPS70P47161 811 aa4.6□□□□□ -1.67
GEP4YHR100C CDC73Q06697 393 aa4.6□□□□□ -1.67
GEP4YHR100C PCS60P38137 543 aaKnown RBP RIP-Chip data4.59□□□□□ -1.67not detected
GEP4YHR100C XDJ1P39102 459 aa4.59□□□□□ -1.67
GEP4YHR100C SPT2P06843 333 aaPredicted RBP4.58□□□□□ -1.68
GEP4YHR100C BNI4P53858 892 aa4.58□□□□□ -1.68
GEP4YHR100C OSW7P43611 510 aa4.57□□□□□ -1.68
GEP4YHR100C ISU2Q12056 156 aa4.57□□□□□ -1.68
GEP4YHR100C DPS1P04802 557 aaKnown RBP4.56□□□□□ -1.68
GEP4YHR100C BRN1P38170 754 aa4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms