RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	TY1B-ER2	Q03619	1755 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-MR1	Q04214	1755 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-MR2	Q04670	1755 aa	Known RBP	9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-LR1	Q12088	1755 aa	Known RBP	9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-NL1	Q12112	1755 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-GR1	Q12141	1755 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	TY1B-BL	Q12490	1755 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	YOR1	P53049	1477 aa		9.85	□□□□□ -0.83
RSC30	YHR056C	NUP170	P38181	1502 aa		9.82	□□□□□ -0.84
RSC30	YHR056C	SNT2	P53127	1403 aa		9.81	□□□□□ -0.84
RSC30	YHR056C	TSC11	P40061	1430 aa		9.8	□□□□□ -0.84
RSC30	YHR056C	YOR093C	Q12275	1648 aa		9.8	□□□□□ -0.84
RSC30	YHR056C	VTH1	P40438	1549 aa		9.8	□□□□□ -0.84
RSC30	YHR056C	VTH2	P40890	1549 aa		9.8	□□□□□ -0.84
RSC30	YHR056C	MYO4	P32492	1471 aa		9.77	□□□□□ -0.84
RSC30	YHR056C	SPO14	P36126	1683 aa		9.75	□□□□□ -0.85
RSC30	YHR056C	STU1	P38198	1513 aa		9.73	□□□□□ -0.85
RSC30	YHR056C	TRM3	Q07527	1436 aa		9.73	□□□□□ -0.85
RSC30	YHR056C	DOP1	Q03921	1698 aa		9.68	□□□□□ -0.86
RSC30	YHR056C	ULS1	Q08562	1619 aa		9.66	□□□□□ -0.86
RSC30	YHR056C	SNQ2	P32568	1501 aa	Known RBP	9.66	□□□□□ -0.86
RSC30	YHR056C	PDR12	Q02785	1511 aa		9.66	□□□□□ -0.86
RSC30	YHR056C	MET10	P39692	1035 aa		9.63	□□□□□ -0.87
RSC30	YHR056C	BUD3	P25558	1636 aa		9.61	□□□□□ -0.87
RSC30	YHR056C	STH1	P32597	1359 aa		9.59	□□□□□ -0.87
RSC30	YHR056C	IQG1	Q12280	1495 aa		9.57	□□□□□ -0.88
RSC30	YHR056C	GDB1	Q06625	1536 aa		9.56	□□□□□ -0.88
RSC30	YHR056C	PDR10	P51533	1564 aa		9.54	□□□□□ -0.88
RSC30	YHR056C	MLP2	P40457	1679 aa		9.52	□□□□□ -0.89
RSC30	YHR056C	YTA7	P40340	1379 aa		9.51	□□□□□ -0.89
RSC30	YHR056C	PDR15	Q04182	1529 aa	Known RBP	9.47	□□□□□ -0.89
RSC30	YHR056C	CHC1	P22137	1653 aa	Known RBP	9.45	□□□□□ -0.9
RSC30	YHR056C	DNF3	Q12674	1656 aa		9.45	□□□□□ -0.9
RSC30	YHR056C	RTT106	P40161	455 aa		9.43	□□□□□ -0.9
RSC30	YHR056C	NUP157	P40064	1391 aa	Known RBP	9.41	□□□□□ -0.9
RSC30	YHR056C	ARO1	P08566	1588 aa	Known RBP	9.4	□□□□□ -0.91
RSC30	YHR056C	TY3B-G	Q99315	1547 aa		9.31	□□□□□ -0.92
RSC30	YHR056C	YAP3	P38749	330 aa		9.27	□□□□□ -0.93
RSC30	YHR056C	HAP1	P0CE41	1502 aa		9.25	□□□□□ -0.93
RSC30	YHR056C	BNR1	P40450	1375 aa		9.25	□□□□□ -0.93
RSC30	YHR056C	SEC7	P11075	2009 aa	Known RBP	9.23	□□□□□ -0.93
RSC30	YHR056C	CAT8	P39113	1433 aa		9.22	□□□□□ -0.93
RSC30	YHR056C	MAK10	Q02197	733 aa		9.22	□□□□□ -0.93
RSC30	YHR056C	URN1	Q06525	465 aa	Known RBP	9.22	□□□□□ -0.93
RSC30	YHR056C	TAF7	Q05021	590 aa		9.18	□□□□□ -0.94
RSC30	YHR056C	TY1B-NL2	Q99337	1749 aa	Known RBP	9.18	□□□□□ -0.94
RSC30	YHR056C	YMR196W	Q04336	1088 aa		9.14	□□□□□ -0.95
RSC30	YHR056C	USO1	P25386	1790 aa		9.11	□□□□□ -0.95
RSC30	YHR056C	YSP2	Q06681	1438 aa		9.08	□□□□□ -0.96
RSC30	YHR056C	YBT1	P32386	1661 aa		9.05	□□□□□ -0.96
RSC30	YHR056C	NUP188	P52593	1655 aa	Known RBP	9.02	□□□□□ -0.97
RSC30	YHR056C	IML1	P47170	1584 aa		8.99	□□□□□ -0.97
RSC30	YHR056C	YAH1	Q12184	172 aa	Known RBP	8.99	□□□□□ -0.97
RSC30	YHR056C	GEA1	P47102	1408 aa	Predicted RBP	8.97	□□□□□ -0.97
RSC30	YHR056C	VMR1	P38735	1592 aa		8.96	□□□□□ -0.98
RSC30	YHR056C	THI12	P42883	340 aa		8.95	□□□□□ -0.98
RSC30	YHR056C	THI5	P43534	340 aa		8.95	□□□□□ -0.98
RSC30	YHR056C	THI11	P47183	340 aa		8.95	□□□□□ -0.98
RSC30	YHR056C	THI13	Q07748	340 aa		8.95	□□□□□ -0.98
RSC30	YHR056C	GLN1	P32288	370 aa	Known RBP	8.93	□□□□□ -0.98
RSC30	YHR056C	IPL1	P38991	367 aa		8.9	□□□□□ -0.98
RSC30	YHR056C	CKB1	P43639	278 aa		8.89	□□□□□ -0.99
RSC30	YHR056C	IFH1	P39520	1085 aa		8.88	□□□□□ -0.99
RSC30	YHR056C	SAS10	Q12136	610 aa	Predicted RBP	8.86	□□□□□ -0.99
RSC30	YHR056C	SRB8	P25648	1427 aa		8.85	□□□□□ -0.99
RSC30	YHR056C	PRI1	P10363	409 aa		8.83	□□□□□ -1
RSC30	YHR056C	YIL055C	P40523	627 aa	Known RBP	8.82	□□□□□ -1
RSC30	YHR056C	BCK1	Q01389	1478 aa		8.78	□□□□□ -1
RSC30	YHR056C	PTP3	P40048	928 aa		8.76	□□□□□ -1.01
RSC30	YHR056C	YMR074C	Q04773	145 aa		8.75	□□□□□ -1.01
RSC30	YHR056C	TYS1	P36421	394 aa	Known RBP	8.71	□□□□□ -1.02
RSC30	YHR056C	BUD21	Q08492	214 aa	Predicted RBP	8.7	□□□□□ -1.02
RSC30	YHR056C	PDR11	P40550	1411 aa		8.69	□□□□□ -1.02
RSC30	YHR056C	PDR5	P33302	1511 aa	Known RBP	8.69	□□□□□ -1.02
RSC30	YHR056C	CFT1	Q06632	1357 aa	Known RBP	8.69	□□□□□ -1.02
RSC30	YHR056C	APP1	P53933	587 aa		8.64	□□□□□ -1.03
RSC30	YHR056C	EDE1	P34216	1381 aa		8.62	□□□□□ -1.03
RSC30	YHR056C	YRF1-2	P40105	1681 aa		8.61	□□□□□ -1.03
RSC30	YHR056C	GCN2	P15442	1659 aa		8.58	□□□□□ -1.04
RSC30	YHR056C	REB1	P21538	810 aa		8.57	□□□□□ -1.04
RSC30	YHR056C	MRX12	P47084	519 aa		8.57	□□□□□ -1.04
RSC30	YHR056C	YNR029C	P53729	429 aa	Known RBP	8.57	□□□□□ -1.04
RSC30	YHR056C	IMH1	Q06704	911 aa	Known RBP	8.54	□□□□□ -1.04
RSC30	YHR056C	BUD31	P25337	157 aa	Predicted RBP	8.54	□□□□□ -1.04
RSC30	YHR056C	ENT1	Q12518	454 aa		8.54	□□□□□ -1.04
RSC30	YHR056C	GTT3	P39996	337 aa		8.53	□□□□□ -1.04
RSC30	YHR056C	NUP192	P47054	1683 aa		8.53	□□□□□ -1.04
RSC30	YHR056C	RIA1	P53893	1110 aa		8.52	□□□□□ -1.05
RSC30	YHR056C	ENV9	Q08651	330 aa		8.52	□□□□□ -1.05
RSC30	YHR056C	UBP1	P25037	809 aa		8.51	□□□□□ -1.05
RSC30	YHR056C	KRE5	P22023	1365 aa		8.51	□□□□□ -1.05
RSC30	YHR056C	RRP5	Q05022	1729 aa	Known RBP	8.5	□□□□□ -1.05
RSC30	YHR056C	SSA1	P10591	642 aa	Known RBP	8.47	□□□□□ -1.05
RSC30	YHR056C	UGA2	P38067	497 aa		8.4	□□□□□ -1.06
RSC30	YHR056C	RAV1	P47104	1357 aa		8.37	□□□□□ -1.07
RSC30	YHR056C	YBL086C	P38177	466 aa		8.36	□□□□□ -1.07
RSC30	YHR056C	TY3B-I	Q7LHG5	1498 aa	Known RBP	8.36	□□□□□ -1.07
RSC30	YHR056C	ALD4	P46367	519 aa	Known RBP	8.34	□□□□□ -1.07
RSC30	YHR056C	ALD2	P47771	506 aa		8.33	□□□□□ -1.08
RSC30	YHR056C	ROM2	P51862	1356 aa	Known RBP	8.33	□□□□□ -1.08

Retrieved 100 of 5,963 RNA–protein pairs in 283.1 ms