RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeastyeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFK1YGR240C CDC25P04821 1589 aa5.97□□□□□ -1.45
PFK1YGR240C MNN4P36044 1178 aa5.96□□□□□ -1.46
PFK1YGR240C RPN1P38764 993 aaKnown RBP5.95□□□□□ -1.46
PFK1YGR240C PTP3P40048 928 aa5.93□□□□□ -1.46
PFK1YGR240C RPS0BP46654 252 aaKnown RBP5.92□□□□□ -1.46
PFK1YGR240C TY1B-JR2P47100 1755 aaKnown RBP5.92□□□□□ -1.46
PFK1YGR240C TY1B-ER2Q03619 1755 aa5.92□□□□□ -1.46
PFK1YGR240C TY1B-MR1Q04214 1755 aa5.92□□□□□ -1.46
PFK1YGR240C TY1B-MR2Q04670 1755 aaKnown RBP5.92□□□□□ -1.46
PFK1YGR240C TY1B-LR1Q12088 1755 aaKnown RBP5.92□□□□□ -1.46
PFK1YGR240C TY1B-NL1Q12112 1755 aa5.92□□□□□ -1.46
PFK1YGR240C TY1B-GR1Q12141 1755 aa5.92□□□□□ -1.46
PFK1YGR240C TY1B-BLQ12490 1755 aa5.92□□□□□ -1.46
PFK1YGR240C BRL1P38770 471 aa5.91□□□□□ -1.46
PFK1YGR240C RPA190P10964 1664 aaKnown RBP5.91□□□□□ -1.46
PFK1YGR240C PAN1P32521 1480 aa5.91□□□□□ -1.46
PFK1YGR240C SNQ2P32568 1501 aaKnown RBP5.91□□□□□ -1.46
PFK1YGR240C ULS1Q08562 1619 aa5.89□□□□□ -1.47
PFK1YGR240C SPP41P38904 1435 aa5.89□□□□□ -1.47
PFK1YGR240C MLP2P40457 1679 aa5.89□□□□□ -1.47
PFK1YGR240C ESC1Q03661 1658 aaKnown RBP5.89□□□□□ -1.47
PFK1YGR240C VTH1P40438 1549 aa5.88□□□□□ -1.47
PFK1YGR240C VTH2P40890 1549 aa5.88□□□□□ -1.47
PFK1YGR240C EBP2P36049 427 aaKnown RBP5.88□□□□□ -1.47
PFK1YGR240C MDG1P53885 366 aa5.87□□□□□ -1.47
PFK1YGR240C YML020WQ03722 664 aa5.87□□□□□ -1.47
PFK1YGR240C NTE1Q04958 1679 aa5.87□□□□□ -1.47
PFK1YGR240C RPO21P04050 1733 aaKnown RBP5.86□□□□□ -1.47
PFK1YGR240C SNT2P53127 1403 aa5.86□□□□□ -1.47
PFK1YGR240C DNF1P32660 1571 aa5.85□□□□□ -1.47
PFK1YGR240C TSC11P40061 1430 aa5.85□□□□□ -1.47
PFK1YGR240C NUP170P38181 1502 aa5.85□□□□□ -1.47
PFK1YGR240C SWE1P32944 819 aa5.84□□□□□ -1.47
PFK1YGR240C NUG1P40010 520 aaKnown RBP5.84□□□□□ -1.47
PFK1YGR240C RSE1Q04693 1361 aaKnown RBP5.84□□□□□ -1.47
PFK1YGR240C IRC20Q06554 1556 aa5.83□□□□□ -1.48
PFK1YGR240C GIN4Q12263 1142 aa5.83□□□□□ -1.48
PFK1YGR240C NOP8Q08287 484 aaPredicted RBP5.82□□□□□ -1.48
PFK1YGR240C PDR15Q04182 1529 aaKnown RBP5.82□□□□□ -1.48
PFK1YGR240C SUB1P54000 292 aaKnown RBP5.81□□□□□ -1.48
PFK1YGR240C CKB1P43639 278 aa5.81□□□□□ -1.48
PFK1YGR240C VPS72Q03388 795 aa5.8□□□□□ -1.48
PFK1YGR240C NOP7P53261 605 aaKnown RBP5.79□□□□□ -1.48
PFK1YGR240C STH1P32597 1359 aa5.79□□□□□ -1.48
PFK1YGR240C ATG36P46983 293 aa5.79□□□□□ -1.48
PFK1YGR240C TY3B-GQ99315 1547 aa5.78□□□□□ -1.48
PFK1YGR240C CAB3P36076 571 aa5.78□□□□□ -1.48
PFK1YGR240C ASF1P32447 279 aa5.78□□□□□ -1.48
PFK1YGR240C YBT1P32386 1661 aa5.77□□□□□ -1.49
PFK1YGR240C MET5P47169 1442 aa5.77□□□□□ -1.49
PFK1YGR240C TRM732Q03496 1420 aa5.77□□□□□ -1.49
PFK1YGR240C YRF1-1P0CX20 1796 aa5.77□□□□□ -1.49
PFK1YGR240C YRF1-5P0CX21 1796 aa5.77□□□□□ -1.49
PFK1YGR240C YRF1-8P0CX22 1796 aa5.77□□□□□ -1.49
PFK1YGR240C CWC22P53333 577 aaKnown RBP5.76□□□□□ -1.49
PFK1YGR240C GEA2P39993 1459 aaKnown RBP5.76□□□□□ -1.49
PFK1YGR240C PDR12Q02785 1511 aa5.75□□□□□ -1.49
PFK1YGR240C SLX8P40072 274 aa5.74□□□□□ -1.49
PFK1YGR240C RTS3P53289 263 aa5.73□□□□□ -1.49
PFK1YGR240C GEA1P47102 1408 aaPredicted RBP5.73□□□□□ -1.49
PFK1YGR240C NUP159P40477 1460 aa5.73□□□□□ -1.49
PFK1YGR240C LAM6Q08001 693 aa5.73□□□□□ -1.49
PFK1YGR240C TPO2P53283 614 aa5.73□□□□□ -1.49
PFK1YGR240C CAT8P39113 1433 aa5.71□□□□□ -1.49
PFK1YGR240C BRN1P38170 754 aa5.71□□□□□ -1.49
PFK1YGR240C GDB1Q06625 1536 aa5.71□□□□□ -1.5
PFK1YGR240C SPO14P36126 1683 aa5.71□□□□□ -1.5
PFK1YGR240C TOA1P32773 286 aa5.7□□□□□ -1.5
PFK1YGR240C OSW7P43611 510 aa5.7□□□□□ -1.5
PFK1YGR240C FAR11P53917 953 aa5.7□□□□□ -1.5
PFK1YGR240C PDR10P51533 1564 aa5.7□□□□□ -1.5
PFK1YGR240C IKI3Q06706 1349 aaKnown RBP5.7□□□□□ -1.5
PFK1YGR240C HIF1Q12373 385 aa5.69□□□□□ -1.5
PFK1YGR240C RLP24Q07915 199 aaKnown RBP5.67□□□□□ -1.5
PFK1YGR240C VPS15P22219 1454 aa5.67□□□□□ -1.5
PFK1YGR240C SPC42P36094 363 aa5.67□□□□□ -1.5
PFK1YGR240C YJR008WP47085 338 aa5.67□□□□□ -1.5
PFK1YGR240C ARO1P08566 1588 aaKnown RBP5.66□□□□□ -1.5
PFK1YGR240C SSP1P38871 571 aa5.66□□□□□ -1.5
PFK1YGR240C DOS2P54858 310 aa5.66□□□□□ -1.5
PFK1YGR240C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
PFK1YGR240C BUD21Q08492 214 aaPredicted RBP5.64□□□□□ -1.51
PFK1YGR240C MET10P39692 1035 aa5.64□□□□□ -1.51
PFK1YGR240C NAB3P38996 802 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PFK1YGR240C GEF1P37020 779 aa5.63□□□□□ -1.51
PFK1YGR240C SSF1P38789 453 aaPredicted RBP5.63□□□□□ -1.51
PFK1YGR240C MRX12P47084 519 aa5.62□□□□□ -1.51
PFK1YGR240C BUD3P25558 1636 aa5.62□□□□□ -1.51
PFK1YGR240C SSA1P10591 642 aaKnown RBP5.61□□□□□ -1.51
PFK1YGR240C LTE1P07866 1435 aa5.61□□□□□ -1.51
PFK1YGR240C HGH1P48362 394 aaKnown RBP5.61□□□□□ -1.51
PFK1YGR240C PSH1Q12161 406 aa5.61□□□□□ -1.51
PFK1YGR240C PAM1P37304 830 aaKnown RBP5.61□□□□□ -1.51
PFK1YGR240C IQG1Q12280 1495 aa5.61□□□□□ -1.51
PFK1YGR240C PDR1P12383 1068 aa5.6□□□□□ -1.51
PFK1YGR240C SPB4P25808 606 aaPredicted RBP5.59□□□□□ -1.51
PFK1YGR240C DOP1Q03921 1698 aa5.58□□□□□ -1.52
PFK1YGR240C SSM4P40318 1319 aa5.58□□□□□ -1.52
PFK1YGR240C ZDS1P50111 915 aaKnown RBP5.58□□□□□ -1.52
PFK1YGR240C KIP3P53086 805 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms