RNA–Protein interactions for RNA: YGR014W

MSB2, Transcript of Mucin family member involved in various signaling pathways, yeastyeast

Gene MSB2, Length 3,921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB2YGR014W UFD4P33202 1483 aa5.23□□□□□ -1.57
MSB2YGR014W TAF2P23255 1407 aa5.21□□□□□ -1.57
MSB2YGR014W PDR5P33302 1511 aaKnown RBP5.2□□□□□ -1.58
MSB2YGR014W CHC1P22137 1653 aaKnown RBP5.19□□□□□ -1.58
MSB2YGR014W PAN1P32521 1480 aa5.19□□□□□ -1.58
MSB2YGR014W GDB1Q06625 1536 aa5.19□□□□□ -1.58
MSB2YGR014W PDR15Q04182 1529 aaKnown RBP5.18□□□□□ -1.58
MSB2YGR014W GCN2P15442 1659 aa5.15□□□□□ -1.59
MSB2YGR014W BNI1P41832 1953 aa5.14□□□□□ -1.59
MSB2YGR014W DOP1Q03921 1698 aa5.14□□□□□ -1.59
MSB2YGR014W DRS1P32892 752 aaKnown RBP5.13□□□□□ -1.59
MSB2YGR014W ARO1P08566 1588 aaKnown RBP5.13□□□□□ -1.59
MSB2YGR014W YTA7P40340 1379 aa5.11□□□□□ -1.59
MSB2YGR014W SPP41P38904 1435 aa5.1□□□□□ -1.59
MSB2YGR014W TSC11P40061 1430 aa5.08□□□□□ -1.6
MSB2YGR014W VPS15P22219 1454 aa5.08□□□□□ -1.6
MSB2YGR014W TRM732Q03496 1420 aa5.07□□□□□ -1.6
MSB2YGR014W HAP1P0CE41 1502 aa5.07□□□□□ -1.6
MSB2YGR014W YOR093CQ12275 1648 aa5.06□□□□□ -1.6
MSB2YGR014W IQG1Q12280 1495 aa5.06□□□□□ -1.6
MSB2YGR014W GEA2P39993 1459 aaKnown RBP5.05□□□□□ -1.6
MSB2YGR014W MET5P47169 1442 aa5.05□□□□□ -1.6
MSB2YGR014W VMR1P38735 1592 aa5.02□□□□□ -1.61
MSB2YGR014W NUP192P47054 1683 aa4.99□□□□□ -1.61
MSB2YGR014W NUP188P52593 1655 aaKnown RBP4.99□□□□□ -1.61
MSB2YGR014W SEC7P11075 2009 aaKnown RBP4.98□□□□□ -1.61
MSB2YGR014W CAT8P39113 1433 aa4.97□□□□□ -1.61
MSB2YGR014W BUD3P25558 1636 aa4.95□□□□□ -1.62
MSB2YGR014W NUP159P40477 1460 aa4.95□□□□□ -1.62
MSB2YGR014W DNF2Q12675 1612 aa4.95□□□□□ -1.62
MSB2YGR014W RSE1Q04693 1361 aaKnown RBP4.94□□□□□ -1.62
MSB2YGR014W GEA1P47102 1408 aaPredicted RBP4.92□□□□□ -1.62
MSB2YGR014W TY1B-NL2Q99337 1749 aaKnown RBP4.89□□□□□ -1.63
MSB2YGR014W YSP2Q06681 1438 aa4.86□□□□□ -1.63
MSB2YGR014W DNF3Q12674 1656 aa4.85□□□□□ -1.63
MSB2YGR014W TRM3Q07527 1436 aa4.85□□□□□ -1.63
MSB2YGR014W IKI3Q06706 1349 aaKnown RBP4.83□□□□□ -1.64
MSB2YGR014W IML1P47170 1584 aa4.83□□□□□ -1.64
MSB2YGR014W TY3B-IQ7LHG5 1498 aaKnown RBP4.82□□□□□ -1.64
MSB2YGR014W LTE1P07866 1435 aa4.81□□□□□ -1.64
MSB2YGR014W STH1P32597 1359 aa4.81□□□□□ -1.64
MSB2YGR014W YIL177CP40434 1758 aa4.8□□□□□ -1.64
MSB2YGR014W YJL225CP40889 1758 aa4.8□□□□□ -1.64
MSB2YGR014W SSM4P40318 1319 aa4.76□□□□□ -1.65
MSB2YGR014W SRB8P25648 1427 aa4.75□□□□□ -1.65
MSB2YGR014W YRF1-2P40105 1681 aa4.74□□□□□ -1.65
MSB2YGR014W TY4B-HP0C2J7 1802 aa4.72□□□□□ -1.65
MSB2YGR014W TY4B-JP47024 1803 aa4.72□□□□□ -1.65
MSB2YGR014W USO1P25386 1790 aa4.72□□□□□ -1.65
MSB2YGR014W PDR11P40550 1411 aa4.71□□□□□ -1.66
MSB2YGR014W RRP5Q05022 1729 aaKnown RBP4.7□□□□□ -1.66
MSB2YGR014W APC1P53886 1748 aa4.7□□□□□ -1.66
MSB2YGR014W MMS1Q06211 1407 aa4.69□□□□□ -1.66
MSB2YGR014W SNF2P22082 1703 aa4.68□□□□□ -1.66
MSB2YGR014W NUP157P40064 1391 aaKnown RBP4.64□□□□□ -1.67
MSB2YGR014W MLP1Q02455 1875 aaKnown RBP4.64□□□□□ -1.67
MSB2YGR014W URB1P34241 1764 aaKnown RBP4.6□□□□□ -1.67
MSB2YGR014W FKS3Q04952 1785 aa4.59□□□□□ -1.68
MSB2YGR014W YLR419WQ06698 1435 aaKnown RBP4.59□□□□□ -1.68
MSB2YGR014W BCK1Q01389 1478 aa4.58□□□□□ -1.68
MSB2YGR014W TAF7Q05021 590 aa4.56□□□□□ -1.68
MSB2YGR014W YRF1-3P0CX14 1859 aa4.56□□□□□ -1.68
MSB2YGR014W YRF1-7P0CX15 1859 aa4.56□□□□□ -1.68
MSB2YGR014W YRF1-6P53819 1859 aa4.56□□□□□ -1.68
MSB2YGR014W RAV1P47104 1357 aa4.56□□□□□ -1.68
MSB2YGR014W UTP10P42945 1769 aaKnown RBP4.53□□□□□ -1.68
MSB2YGR014W MET10P39692 1035 aa4.52□□□□□ -1.69
MSB2YGR014W RIM15P43565 1770 aa4.5□□□□□ -1.69
MSB2YGR014W BNR1P40450 1375 aa4.49□□□□□ -1.69
MSB2YGR014W CFT1Q06632 1357 aaKnown RBP4.48□□□□□ -1.69
MSB2YGR014W DRS2P39524 1355 aa4.48□□□□□ -1.69
MSB2YGR014W RTC1Q08281 1341 aa4.46□□□□□ -1.7
MSB2YGR014W YML133CQ03099 1374 aa4.44□□□□□ -1.7
MSB2YGR014W YLL067CQ07888 1374 aa4.44□□□□□ -1.7
MSB2YGR014W YLL066CQ99208 1374 aa4.44□□□□□ -1.7
MSB2YGR014W IOC4Q04213 475 aa4.4□□□□□ -1.7
MSB2YGR014W ITT1Q04638 464 aa4.39□□□□□ -1.71
MSB2YGR014W DUR1,2P32528 1835 aaKnown RBP4.38□□□□□ -1.71
MSB2YGR014W ADE6P38972 1358 aaKnown RBP4.3□□□□□ -1.72
MSB2YGR014W PSK1P31374 1356 aa4.3□□□□□ -1.72
MSB2YGR014W SAS10Q12136 610 aaPredicted RBP4.3□□□□□ -1.72
MSB2YGR014W HKR1P41809 1802 aa4.29□□□□□ -1.72
MSB2YGR014W FIG2P25653 1609 aa4.29□□□□□ -1.72
MSB2YGR014W MHP1P43638 1398 aa4.28□□□□□ -1.72
MSB2YGR014W RTT106P40161 455 aa4.27□□□□□ -1.73
MSB2YGR014W IFH1P39520 1085 aa4.26□□□□□ -1.73
MSB2YGR014W FAS2P19097 1887 aaKnown RBP4.26□□□□□ -1.73
MSB2YGR014W IPL1P38991 367 aa4.26□□□□□ -1.73
MSB2YGR014W AUS1Q08409 1394 aa4.25□□□□□ -1.73
MSB2YGR014W YRF1-4O13559 1382 aa4.23□□□□□ -1.73
MSB2YGR014W YAP3P38749 330 aa4.23□□□□□ -1.73
MSB2YGR014W RAD9P14737 1309 aa4.22□□□□□ -1.73
MSB2YGR014W TYS1P36421 394 aaKnown RBP4.22□□□□□ -1.73
MSB2YGR014W PRP43P53131 767 aaKnown RBP4.22□□□□□ -1.73
MSB2YGR014W BUD21Q08492 214 aaPredicted RBP4.18□□□□□ -1.74
MSB2YGR014W BFR2Q06631 534 aaKnown RBP4.15□□□□□ -1.74
MSB2YGR014W YEF3P16521 1044 aaKnown RBP4.15□□□□□ -1.74
MSB2YGR014W FKH1P40466 484 aa4.15□□□□□ -1.74
MSB2YGR014W ALD4P46367 519 aaKnown RBP4.15□□□□□ -1.74
MSB2YGR014W SEC3P33332 1336 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms