RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W NUP159P40477 1460 aa11.48□□□□□ -0.57
PDA1YER178W SNQ2P32568 1501 aaKnown RBP11.48□□□□□ -0.57
PDA1YER178W BNI1P41832 1953 aa11.47□□□□□ -0.57
PDA1YER178W YTA7P40340 1379 aa11.46□□□□□ -0.57
PDA1YER178W ULS1Q08562 1619 aa11.44□□□□□ -0.58
PDA1YER178W MLP2P40457 1679 aa11.42□□□□□ -0.58
PDA1YER178W LTE1P07866 1435 aa11.4□□□□□ -0.58
PDA1YER178W SNT2P53127 1403 aa11.4□□□□□ -0.58
PDA1YER178W VPS15P22219 1454 aa11.38□□□□□ -0.59
PDA1YER178W SPO14P36126 1683 aa11.34□□□□□ -0.59
PDA1YER178W PDR15Q04182 1529 aaKnown RBP11.33□□□□□ -0.6
PDA1YER178W GEA2P39993 1459 aaKnown RBP11.32□□□□□ -0.6
PDA1YER178W IRC20Q06554 1556 aa11.29□□□□□ -0.6
PDA1YER178W STH1P32597 1359 aa11.25□□□□□ -0.61
PDA1YER178W PDR12Q02785 1511 aa11.24□□□□□ -0.61
PDA1YER178W ITT1Q04638 464 aa11.22□□□□□ -0.61
PDA1YER178W GDB1Q06625 1536 aa11.22□□□□□ -0.61
PDA1YER178W TY3B-GQ99315 1547 aa11.19□□□□□ -0.62
PDA1YER178W YBT1P32386 1661 aa11.18□□□□□ -0.62
PDA1YER178W NUP170P38181 1502 aa11.18□□□□□ -0.62
PDA1YER178W SAS10Q12136 610 aaPredicted RBP11.17□□□□□ -0.62
PDA1YER178W DOP1Q03921 1698 aa11.17□□□□□ -0.62
PDA1YER178W DRS2P39524 1355 aa11.13□□□□□ -0.63
PDA1YER178W PDR10P51533 1564 aa11.11□□□□□ -0.63
PDA1YER178W MMS1Q06211 1407 aa11.09□□□□□ -0.63
PDA1YER178W DNF2Q12675 1612 aa11.09□□□□□ -0.63
PDA1YER178W GEA1P47102 1408 aaPredicted RBP11.09□□□□□ -0.63
PDA1YER178W MET10P39692 1035 aa11.08□□□□□ -0.64
PDA1YER178W NUP157P40064 1391 aaKnown RBP11.07□□□□□ -0.64
PDA1YER178W IQG1Q12280 1495 aa11.06□□□□□ -0.64
PDA1YER178W RTT106P40161 455 aa11.04□□□□□ -0.64
PDA1YER178W BUD3P25558 1636 aa11.03□□□□□ -0.64
PDA1YER178W CHC1P22137 1653 aaKnown RBP11.01□□□□□ -0.65
PDA1YER178W ARO1P08566 1588 aaKnown RBP11.01□□□□□ -0.65
PDA1YER178W IFH1P39520 1085 aa11□□□□□ -0.65
PDA1YER178W TAF7Q05021 590 aa10.94□□□□□ -0.66
PDA1YER178W CAT8P39113 1433 aa10.93□□□□□ -0.66
PDA1YER178W TRM3Q07527 1436 aa10.93□□□□□ -0.66
PDA1YER178W SEC7P11075 2009 aaKnown RBP10.92□□□□□ -0.66
PDA1YER178W YSP2Q06681 1438 aa10.89□□□□□ -0.67
PDA1YER178W YOR093CQ12275 1648 aa10.87□□□□□ -0.67
PDA1YER178W ABP1P15891 592 aaKnown RBP10.81□□□□□ -0.68
PDA1YER178W MIF2P35201 549 aa10.79□□□□□ -0.68
PDA1YER178W DNF3Q12674 1656 aa10.76□□□□□ -0.69
PDA1YER178W CKB1P43639 278 aa10.75□□□□□ -0.69
PDA1YER178W SRB8P25648 1427 aa10.71□□□□□ -0.69
PDA1YER178W BNR1P40450 1375 aa10.71□□□□□ -0.69
PDA1YER178W VMR1P38735 1592 aa10.68□□□□□ -0.7
PDA1YER178W SSM4P40318 1319 aa10.65□□□□□ -0.7
PDA1YER178W NUP188P52593 1655 aaKnown RBP10.64□□□□□ -0.71
PDA1YER178W IKI3Q06706 1349 aaKnown RBP10.62□□□□□ -0.71
PDA1YER178W USO1P25386 1790 aa10.57□□□□□ -0.72
PDA1YER178W IML1P47170 1584 aa10.56□□□□□ -0.72
PDA1YER178W GCN2P15442 1659 aa10.53□□□□□ -0.72
PDA1YER178W PDR5P33302 1511 aaKnown RBP10.52□□□□□ -0.73
PDA1YER178W YAP3P38749 330 aa10.51□□□□□ -0.73
PDA1YER178W YFR006WP43590 535 aa10.5□□□□□ -0.73
PDA1YER178W BUD21Q08492 214 aaPredicted RBP10.49□□□□□ -0.73
PDA1YER178W PDR11P40550 1411 aa10.49□□□□□ -0.73
PDA1YER178W TYS1P36421 394 aaKnown RBP10.44□□□□□ -0.74
PDA1YER178W HAP1P0CE41 1502 aa10.43□□□□□ -0.74
PDA1YER178W IPL1P38991 367 aa10.4□□□□□ -0.74
PDA1YER178W MAK10Q02197 733 aa10.38□□□□□ -0.75
PDA1YER178W NUP192P47054 1683 aa10.35□□□□□ -0.75
PDA1YER178W URN1Q06525 465 aaKnown RBP10.33□□□□□ -0.76
PDA1YER178W TY1B-NL2Q99337 1749 aaKnown RBP10.31□□□□□ -0.76
PDA1YER178W RAV1P47104 1357 aa10.22□□□□□ -0.77
PDA1YER178W BCK1Q01389 1478 aa10.18□□□□□ -0.78
PDA1YER178W KRE5P22023 1365 aa10.18□□□□□ -0.78
PDA1YER178W THI12P42883 340 aa10.16□□□□□ -0.78
PDA1YER178W THI5P43534 340 aa10.16□□□□□ -0.78
PDA1YER178W THI11P47183 340 aa10.16□□□□□ -0.78
PDA1YER178W THI13Q07748 340 aa10.16□□□□□ -0.78
PDA1YER178W CFT1Q06632 1357 aaKnown RBP10.15□□□□□ -0.78
PDA1YER178W RTC1Q08281 1341 aa10.12□□□□□ -0.79
PDA1YER178W RAD9P14737 1309 aa10.11□□□□□ -0.79
PDA1YER178W BFR2Q06631 534 aaKnown RBP10.08□□□□□ -0.8
PDA1YER178W RIA1P53893 1110 aa10.07□□□□□ -0.8
PDA1YER178W YMR196WQ04336 1088 aa10.06□□□□□ -0.8
PDA1YER178W TY3B-IQ7LHG5 1498 aaKnown RBP10.05□□□□□ -0.8
PDA1YER178W CAB1Q04430 367 aa10.05□□□□□ -0.8
PDA1YER178W PAF1P38351 445 aa10.04□□□□□ -0.8
PDA1YER178W FAP1P53971 965 aa10.03□□□□□ -0.8
PDA1YER178W ALD4P46367 519 aaKnown RBP10.02□□□□□ -0.81
PDA1YER178W YNR029CP53729 429 aaKnown RBP10.02□□□□□ -0.81
PDA1YER178W NOP7P53261 605 aaKnown RBP10.01□□□□□ -0.81
PDA1YER178W TY4B-HP0C2J7 1802 aa10□□□□□ -0.81
PDA1YER178W TY4B-JP47024 1803 aa10□□□□□ -0.81
PDA1YER178W MRX12P47084 519 aa9.99□□□□□ -0.81
PDA1YER178W TAF5P38129 798 aa9.95□□□□□ -0.82
PDA1YER178W RRP5Q05022 1729 aaKnown RBP9.94□□□□□ -0.82
PDA1YER178W PTP3P40048 928 aa9.91□□□□□ -0.82
PDA1YER178W TAF8Q03750 510 aa9.9□□□□□ -0.82
PDA1YER178W YIL177CP40434 1758 aa9.88□□□□□ -0.83
PDA1YER178W YJL225CP40889 1758 aa9.88□□□□□ -0.83
PDA1YER178W ESL2P36168 1195 aa9.87□□□□□ -0.83
PDA1YER178W PPH3P32345 308 aa9.86□□□□□ -0.83
PDA1YER178W YLR419WQ06698 1435 aaKnown RBP9.86□□□□□ -0.83
PDA1YER178W YRF1-2P40105 1681 aa9.86□□□□□ -0.83
PDA1YER178W APP1P53933 587 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms