RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	YFR006W	P43590	535 aa		5.25	□□□□□ -1.57
PEX5	YDR244W	YOR238W	Q08634	303 aa		5.25	□□□□□ -1.57
PEX5	YDR244W	HGH1	P48362	394 aa	Known RBP	5.25	□□□□□ -1.57
PEX5	YDR244W	NUP42	P49686	430 aa	Known RBP	5.24	□□□□□ -1.57
PEX5	YDR244W	MAK21	Q12176	1025 aa	Known RBP	5.23	□□□□□ -1.57
PEX5	YDR244W	DIT2	P21595	489 aa		5.23	□□□□□ -1.57
PEX5	YDR244W	PTC3	P34221	468 aa	Known RBP	5.21	□□□□□ -1.58
PEX5	YDR244W	WSC3	Q12215	556 aa		5.21	□□□□□ -1.58
PEX5	YDR244W	COX6	P00427	148 aa		5.2	□□□□□ -1.58
PEX5	YDR244W	ATF2	P53296	535 aa		5.2	□□□□□ -1.58
PEX5	YDR244W	GUA1	P38625	525 aa	Known RBP	5.18	□□□□□ -1.58
PEX5	YDR244W	TIF11	P38912	153 aa	Known RBP	5.18	□□□□□ -1.58
PEX5	YDR244W	VHR2	P40041	505 aa		5.16	□□□□□ -1.58
PEX5	YDR244W	PIB1	Q06651	286 aa		5.16	□□□□□ -1.58
PEX5	YDR244W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
PEX5	YDR244W	YAP5	P40574	245 aa		5.13	□□□□□ -1.59
PEX5	YDR244W	VMA1	P17255	1071 aa	Known RBP	5.13	□□□□□ -1.59
PEX5	YDR244W	ATH1	P48016	1211 aa		5.13	□□□□□ -1.59
PEX5	YDR244W	HPC2	Q01448	625 aa		5.13	□□□□□ -1.59
PEX5	YDR244W	YDR090C	Q03193	310 aa		5.12	□□□□□ -1.59
PEX5	YDR244W	UBP14	P38237	781 aa	Known RBP	5.11	□□□□□ -1.59
PEX5	YDR244W	KIC1	P38692	1080 aa		5.11	□□□□□ -1.59
PEX5	YDR244W	YLR326W	Q06170	240 aa	Known RBP	5.11	□□□□□ -1.59
PEX5	YDR244W	GRE2	Q12068	342 aa	Known RBP	5.11	□□□□□ -1.59
PEX5	YDR244W	LDB19	Q12502	818 aa		5.11	□□□□□ -1.59
PEX5	YDR244W	TFB3	Q03290	321 aa		5.11	□□□□□ -1.59
PEX5	YDR244W	GUT1	P32190	709 aa		5.1	□□□□□ -1.59
PEX5	YDR244W	BRL1	P38770	471 aa		5.09	□□□□□ -1.59
PEX5	YDR244W	RAD54	P32863	898 aa		5.08	□□□□□ -1.6
PEX5	YDR244W	YGR273C	P53329	174 aa		5.08	□□□□□ -1.6
PEX5	YDR244W	PSE1	P32337	1089 aa	Known RBP	5.07	□□□□□ -1.6
PEX5	YDR244W	RGA1	P39083	1007 aa		5.07	□□□□□ -1.6
PEX5	YDR244W	SSA2	P10592	639 aa	Known RBP	5.07	□□□□□ -1.6
PEX5	YDR244W	KEX1	P09620	729 aa		5.05	□□□□□ -1.6
PEX5	YDR244W	CSN12	P47130	423 aa		5.05	□□□□□ -1.6
PEX5	YDR244W	SAM3	Q08986	587 aa		5.05	□□□□□ -1.6
PEX5	YDR244W	PKC1	P24583	1151 aa		5.04	□□□□□ -1.6
PEX5	YDR244W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	RIP-Chip
PEX5	YDR244W	GYP5	Q12344	894 aa		5.04	□□□□□ -1.6
PEX5	YDR244W	IOC2	Q12072	812 aa		5.02	□□□□□ -1.61
PEX5	YDR244W	SOL3	P38858	249 aa		5.02	□□□□□ -1.61
PEX5	YDR244W	TEA1	P47988	759 aa		5.02	□□□□□ -1.61
PEX5	YDR244W	ORC6	P38826	435 aa		5.01	□□□□□ -1.61
PEX5	YDR244W	ULI1	P43604	169 aa		5.01	□□□□□ -1.61
PEX5	YDR244W	YJL007C	P47080	104 aa		5.01	□□□□□ -1.61
PEX5	YDR244W	GTT3	P39996	337 aa		5	□□□□□ -1.61
PEX5	YDR244W	BIM1	P40013	344 aa		5	□□□□□ -1.61
PEX5	YDR244W	SSA1	P10591	642 aa	Known RBP	4.99	□□□□□ -1.61
PEX5	YDR244W	DCW1	P36091	449 aa		4.99	□□□□□ -1.61
PEX5	YDR244W	GLN1	P32288	370 aa	Known RBP	4.98	□□□□□ -1.61
PEX5	YDR244W	ATG32	P40458	529 aa		4.98	□□□□□ -1.61
PEX5	YDR244W	SUB2	Q07478	446 aa	Known RBP	4.98	□□□□□ -1.61
PEX5	YDR244W	KTR1	P27810	393 aa	Known RBP	4.97	□□□□□ -1.61
PEX5	YDR244W	CLB5	P30283	435 aa		4.97	□□□□□ -1.61
PEX5	YDR244W	RPL34B	P40525	121 aa	Known RBP	4.97	□□□□□ -1.61
PEX5	YDR244W	NST1	P53935	1240 aa		4.97	□□□□□ -1.61
PEX5	YDR244W	YOL036W	Q08206	761 aa		4.97	□□□□□ -1.61
PEX5	YDR244W	TYW1	Q08960	810 aa	Known RBP	4.97	□□□□□ -1.61
PEX5	YDR244W	RGR1	P19263	1082 aa		4.96	□□□□□ -1.62
PEX5	YDR244W	BCK2	P33306	851 aa		4.96	□□□□□ -1.62
PEX5	YDR244W	GEF1	P37020	779 aa		4.96	□□□□□ -1.62
PEX5	YDR244W	HTA1	P04911	132 aa	Known RBP	4.95	□□□□□ -1.62
PEX5	YDR244W	HTA2	P04912	132 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	YML020W	Q03722	664 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	AI4	P03878	556 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	YBL036C	P38197	257 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	ILV3	P39522	585 aa	Known RBP	4.95	□□□□□ -1.62
PEX5	YDR244W	SET4	P42948	560 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	YMR196W	Q04336	1088 aa		4.95	□□□□□ -1.62
PEX5	YDR244W	MPH3	P0CE00	602 aa		4.94	□□□□□ -1.62
PEX5	YDR244W	SSA4	P22202	642 aa	Known RBP	4.94	□□□□□ -1.62
PEX5	YDR244W	MVP1	P40959	511 aa	Known RBP	4.94	□□□□□ -1.62
PEX5	YDR244W	TIF1	P10081	395 aa	Known RBP	4.93	□□□□□ -1.62
PEX5	YDR244W	NIS1	P53939	407 aa		4.93	□□□□□ -1.62
PEX5	YDR244W	ERG12	P07277	443 aa		4.93	□□□□□ -1.62
PEX5	YDR244W	RPP1B	P10622	106 aa	Known RBP	4.93	□□□□□ -1.62
PEX5	YDR244W	BIO2	P32451	375 aa		4.92	□□□□□ -1.62
PEX5	YDR244W	SLX8	P40072	274 aa		4.92	□□□□□ -1.62
PEX5	YDR244W	HST2	P53686	357 aa		4.92	□□□□□ -1.62
PEX5	YDR244W	FPK1	P53739	893 aa		4.92	□□□□□ -1.62
PEX5	YDR244W	GAP1	P19145	602 aa	Predicted RBP	4.91	□□□□□ -1.62
PEX5	YDR244W	PKH3	Q03306	898 aa	Predicted RBP	4.91	□□□□□ -1.62
PEX5	YDR244W	CSC1	Q06538	782 aa		4.91	□□□□□ -1.62
PEX5	YDR244W	SLI15	P38283	698 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	YPR109W	Q06104	294 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	NOP8	Q08287	484 aa	Predicted RBP	4.9	□□□□□ -1.62
PEX5	YDR244W	YPR204W	Q08995	1032 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	RAD59	Q12223	238 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	MSB4	Q12317	492 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	MMP1	Q12372	583 aa		4.9	□□□□□ -1.62
PEX5	YDR244W	ESS1	P22696	170 aa		4.9	□□□□□ -1.63
PEX5	YDR244W	CPS1	P27614	576 aa		4.89	□□□□□ -1.63
PEX5	YDR244W	RTG2	P32608	588 aa	Known RBP	4.89	□□□□□ -1.63
PEX5	YDR244W	SCJ1	P25303	377 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	YEL023C	P39992	682 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	DAN4	P47179	1161 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	YNL108C	P53929	270 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	CSE4	P36012	229 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	TFB4	Q12004	338 aa		4.88	□□□□□ -1.63
PEX5	YDR244W	NCR1	Q12200	1170 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms