RNA–Protein interactions for RNA: YDR160W

SSY1, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene SSY1, Length 2,559 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSY1	YDR160W	SET4	P42948	560 aa		4.95	□□□□□ -1.62
SSY1	YDR160W	ATH1	P48016	1211 aa		4.95	□□□□□ -1.62
SSY1	YDR160W	YBL029C-A	Q3E756	94 aa		4.95	□□□□□ -1.62
SSY1	YDR160W	REF2	P42073	533 aa	Predicted RBP	4.94	□□□□□ -1.62
SSY1	YDR160W	SPB4	P25808	606 aa	Predicted RBP	4.94	□□□□□ -1.62
SSY1	YDR160W	YDR090C	Q03193	310 aa		4.94	□□□□□ -1.62
SSY1	YDR160W	YGR273C	P53329	174 aa		4.93	□□□□□ -1.62
SSY1	YDR160W	YLR326W	Q06170	240 aa	Known RBP	4.92	□□□□□ -1.62
SSY1	YDR160W	WSC3	Q12215	556 aa		4.92	□□□□□ -1.62
SSY1	YDR160W	VNX1	P42839	908 aa		4.92	□□□□□ -1.62
SSY1	YDR160W	DCW1	P36091	449 aa		4.91	□□□□□ -1.62
SSY1	YDR160W	MSB4	Q12317	492 aa		4.91	□□□□□ -1.62
SSY1	YDR160W	VHR2	P40041	505 aa		4.91	□□□□□ -1.62
SSY1	YDR160W	COX6	P00427	148 aa		4.9	□□□□□ -1.63
SSY1	YDR160W	ILV3	P39522	585 aa	Known RBP	4.9	□□□□□ -1.63
SSY1	YDR160W	NUP42	P49686	430 aa	Known RBP	4.89	□□□□□ -1.63
SSY1	YDR160W	ABP1	P15891	592 aa	Known RBP	4.88	□□□□□ -1.63
SSY1	YDR160W	KEX1	P09620	729 aa		4.88	□□□□□ -1.63
SSY1	YDR160W	HTA1	P04911	132 aa	Known RBP	4.87	□□□□□ -1.63
SSY1	YDR160W	HTA2	P04912	132 aa		4.87	□□□□□ -1.63
SSY1	YDR160W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SSY1	YDR160W	IES2	P40154	320 aa		4.87	□□□□□ -1.63
SSY1	YDR160W	MAK21	Q12176	1025 aa	Known RBP	4.87	□□□□□ -1.63
SSY1	YDR160W	MAM3	Q12296	706 aa		4.87	□□□□□ -1.63
SSY1	YDR160W	TRP5	P00931	707 aa	Known RBP	4.86	□□□□□ -1.63
SSY1	YDR160W	DIT2	P21595	489 aa		4.86	□□□□□ -1.63
SSY1	YDR160W	YEL023C	P39992	682 aa		4.86	□□□□□ -1.63
SSY1	YDR160W	IOC2	Q12072	812 aa		4.86	□□□□□ -1.63
SSY1	YDR160W	RPN1	P38764	993 aa	Known RBP	4.85	□□□□□ -1.63
SSY1	YDR160W	AI4	P03878	556 aa		4.85	□□□□□ -1.63
SSY1	YDR160W	MPH3	P0CE00	602 aa		4.85	□□□□□ -1.63
SSY1	YDR160W	TIF11	P38912	153 aa	Known RBP	4.85	□□□□□ -1.63
SSY1	YDR160W	DAN4	P47179	1161 aa		4.84	□□□□□ -1.64
SSY1	YDR160W	EAP1	P36041	632 aa	Known RBP	4.83	□□□□□ -1.64
SSY1	YDR160W	UBP9	P39967	754 aa		4.83	□□□□□ -1.64
SSY1	YDR160W	BUD31	P25337	157 aa	Predicted RBP	4.83	□□□□□ -1.64
SSY1	YDR160W	ULI1	P43604	169 aa		4.83	□□□□□ -1.64
SSY1	YDR160W	SPP1	Q03012	353 aa		4.83	□□□□□ -1.64
SSY1	YDR160W	YNR021W	P53723	404 aa	Known RBP	4.82	□□□□□ -1.64
SSY1	YDR160W	PTC4	P38089	393 aa		4.82	□□□□□ -1.64
SSY1	YDR160W	GLC3	P32775	704 aa		4.81	□□□□□ -1.64
SSY1	YDR160W	RAD54	P32863	898 aa		4.81	□□□□□ -1.64
SSY1	YDR160W	SLI15	P38283	698 aa		4.8	□□□□□ -1.64
SSY1	YDR160W	ORC6	P38826	435 aa		4.8	□□□□□ -1.64
SSY1	YDR160W	LDB19	Q12502	818 aa		4.79	□□□□□ -1.64
SSY1	YDR160W	JIP4	Q03361	876 aa		4.78	□□□□□ -1.64
SSY1	YDR160W	GAP1	P19145	602 aa	Predicted RBP	4.78	□□□□□ -1.64
SSY1	YDR160W	AIM7	Q12156	149 aa		4.77	□□□□□ -1.65
SSY1	YDR160W	KIC1	P38692	1080 aa		4.76	□□□□□ -1.65
SSY1	YDR160W	YNL035C	P53962	389 aa	Known RBP	4.76	□□□□□ -1.65
SSY1	YDR160W	MID1	P41821	548 aa		4.76	□□□□□ -1.65
SSY1	YDR160W	KIN1	P13185	1064 aa		4.75	□□□□□ -1.65
SSY1	YDR160W	THO2	P53552	1597 aa	Known RBP	4.75	□□□□□ -1.65
SSY1	YDR160W	PSE1	P32337	1089 aa	Known RBP	4.74	□□□□□ -1.65
SSY1	YDR160W	RTG1	P32607	177 aa		4.74	□□□□□ -1.65
SSY1	YDR160W	CDC73	Q06697	393 aa		4.74	□□□□□ -1.65
SSY1	YDR160W	RGR1	P19263	1082 aa		4.74	□□□□□ -1.65
SSY1	YDR160W	PML39	Q03760	334 aa		4.74	□□□□□ -1.65
SSY1	YDR160W	SEC61	P32915	480 aa		4.73	□□□□□ -1.65
SSY1	YDR160W	MVP1	P40959	511 aa	Known RBP	4.73	□□□□□ -1.65
SSY1	YDR160W	FKH1	P40466	484 aa		4.72	□□□□□ -1.65
SSY1	YDR160W	MPC54	Q08550	464 aa		4.72	□□□□□ -1.65
SSY1	YDR160W	DMA2	P53924	522 aa		4.71	□□□□□ -1.65
SSY1	YDR160W	YDR344C	Q05510	147 aa		4.71	□□□□□ -1.65
SSY1	YDR160W	REV3	P14284	1504 aa		4.71	□□□□□ -1.66
SSY1	YDR160W	GUA1	P38625	525 aa	Known RBP	4.7	□□□□□ -1.66
SSY1	YDR160W	ATF2	P53296	535 aa		4.69	□□□□□ -1.66
SSY1	YDR160W	AIR2	Q12476	344 aa	Known RBP	4.69	□□□□□ -1.66
SSY1	YDR160W	ECM5	Q03214	1411 aa		4.69	□□□□□ -1.66
SSY1	YDR160W	NCR1	Q12200	1170 aa		4.69	□□□□□ -1.66
SSY1	YDR160W	TAF7	Q05021	590 aa		4.68	□□□□□ -1.66
SSY1	YDR160W	DPL1	Q05567	589 aa		4.68	□□□□□ -1.66
SSY1	YDR160W	CSC1	Q06538	782 aa		4.68	□□□□□ -1.66
SSY1	YDR160W	BUD4	P47136	1447 aa		4.68	□□□□□ -1.66
SSY1	YDR160W	PEX29	Q03370	554 aa		4.67	□□□□□ -1.66
SSY1	YDR160W	YDL129W	Q07555	291 aa		4.67	□□□□□ -1.66
SSY1	YDR160W	SPT6	P23615	1451 aa	Known RBP	4.67	□□□□□ -1.66
SSY1	YDR160W	HSL1	P34244	1518 aa		4.67	□□□□□ -1.66
SSY1	YDR160W	MDS3	P53094	1487 aa		4.67	□□□□□ -1.66
SSY1	YDR160W	KTR1	P27810	393 aa	Known RBP	4.66	□□□□□ -1.66
SSY1	YDR160W	TEA1	P47988	759 aa		4.66	□□□□□ -1.66
SSY1	YDR160W	NIS1	P53939	407 aa		4.66	□□□□□ -1.66
SSY1	YDR160W	NMA111	P53920	997 aa		4.65	□□□□□ -1.66
SSY1	YDR160W	YPR109W	Q06104	294 aa		4.65	□□□□□ -1.66
SSY1	YDR160W	TFB4	Q12004	338 aa		4.65	□□□□□ -1.66
SSY1	YDR160W	TUM1	Q08686	304 aa	Known RBP	4.64	□□□□□ -1.67
SSY1	YDR160W	SAP30	P38429	201 aa		4.63	□□□□□ -1.67
SSY1	YDR160W	ISU2	Q12056	156 aa		4.63	□□□□□ -1.67
SSY1	YDR160W	SIT4	P20604	311 aa		4.62	□□□□□ -1.67
SSY1	YDR160W	CLB5	P30283	435 aa		4.62	□□□□□ -1.67
SSY1	YDR160W	FPK1	P53739	893 aa		4.62	□□□□□ -1.67
SSY1	YDR160W	YRR1	Q12172	810 aa		4.62	□□□□□ -1.67
SSY1	YDR160W	RPP1B	P10622	106 aa	Known RBP	4.61	□□□□□ -1.67
SSY1	YDR160W	PDR1	P12383	1068 aa		4.61	□□□□□ -1.67
SSY1	YDR160W	ARH1	P48360	493 aa		4.61	□□□□□ -1.67
SSY1	YDR160W	TYW1	Q08960	810 aa	Known RBP	4.61	□□□□□ -1.67
SSY1	YDR160W	TFG1	P41895	735 aa	Predicted RBP	4.61	□□□□□ -1.67
SSY1	YDR160W	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
SSY1	YDR160W	HPC2	Q01448	625 aa		4.61	□□□□□ -1.67
SSY1	YDR160W	PEP1	P32319	1579 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms