RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C TY1B-OLQ12273 1755 aa8.96□□□□□ -0.97
VPS61YDR136C TY1B-PLQ12414 1755 aaKnown RBP8.96□□□□□ -0.97
VPS61YDR136C TAF7Q05021 590 aa8.96□□□□□ -0.98
VPS61YDR136C STH1P32597 1359 aa8.95□□□□□ -0.98
VPS61YDR136C TY1B-BRQ12193 1756 aa8.94□□□□□ -0.98
VPS61YDR136C TY1B-GR3Q12316 1755 aa8.94□□□□□ -0.98
VPS61YDR136C TY1B-ORQ92393 1755 aa8.94□□□□□ -0.98
VPS61YDR136C GEA1P47102 1408 aaPredicted RBP8.92□□□□□ -0.98
VPS61YDR136C SSM4P40318 1319 aa8.88□□□□□ -0.99
VPS61YDR136C VTH1P40438 1549 aa8.88□□□□□ -0.99
VPS61YDR136C VTH2P40890 1549 aa8.88□□□□□ -0.99
VPS61YDR136C TY3B-GQ99315 1547 aa8.87□□□□□ -0.99
VPS61YDR136C TFC8Q12308 588 aa8.84□□□□□ -0.99
VPS61YDR136C YBT1P32386 1661 aa8.84□□□□□ -0.99
VPS61YDR136C PAN1P32521 1480 aa8.83□□□□□ -1
VPS61YDR136C CDC25P04821 1589 aa8.83□□□□□ -1
VPS61YDR136C TSC11P40061 1430 aa8.83□□□□□ -1
VPS61YDR136C CDC27P38042 758 aa8.83□□□□□ -1
VPS61YDR136C TY1B-JR2P47100 1755 aaKnown RBP8.83□□□□□ -1
VPS61YDR136C TY1B-ER2Q03619 1755 aa8.83□□□□□ -1
VPS61YDR136C TY1B-MR1Q04214 1755 aa8.83□□□□□ -1
VPS61YDR136C TY1B-MR2Q04670 1755 aaKnown RBP8.83□□□□□ -1
VPS61YDR136C TY1B-LR1Q12088 1755 aaKnown RBP8.83□□□□□ -1
VPS61YDR136C TY1B-NL1Q12112 1755 aa8.83□□□□□ -1
VPS61YDR136C TY1B-GR1Q12141 1755 aa8.83□□□□□ -1
VPS61YDR136C TY1B-BLQ12490 1755 aa8.83□□□□□ -1
VPS61YDR136C ESC1Q03661 1658 aaKnown RBP8.81□□□□□ -1
VPS61YDR136C HOP09932 586 aa8.81□□□□□ -1
VPS61YDR136C OXP1P28273 1286 aa8.8□□□□□ -1
VPS61YDR136C SNT2P53127 1403 aa8.8□□□□□ -1
VPS61YDR136C IRC20Q06554 1556 aa8.78□□□□□ -1
VPS61YDR136C NTE1Q04958 1679 aa8.77□□□□□ -1.01
VPS61YDR136C YIL055CP40523 627 aaKnown RBP8.76□□□□□ -1.01
VPS61YDR136C IFH1P39520 1085 aa8.74□□□□□ -1.01
VPS61YDR136C RPO21P04050 1733 aaKnown RBP8.74□□□□□ -1.01
VPS61YDR136C VPS15P22219 1454 aa8.73□□□□□ -1.01
VPS61YDR136C DCD1P06773 312 aa8.73□□□□□ -1.01
VPS61YDR136C GEA2P39993 1459 aaKnown RBP8.72□□□□□ -1.01
VPS61YDR136C PDR10P51533 1564 aa8.72□□□□□ -1.01
VPS61YDR136C PTP3P40048 928 aa8.71□□□□□ -1.02
VPS61YDR136C DNF1P32660 1571 aa8.7□□□□□ -1.02
VPS61YDR136C NSR1P27476 414 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
VPS61YDR136C CAT8P39113 1433 aa8.7□□□□□ -1.02
VPS61YDR136C RPA190P10964 1664 aaKnown RBP8.69□□□□□ -1.02
VPS61YDR136C SSP1P38871 571 aa8.68□□□□□ -1.02
VPS61YDR136C YAH1Q12184 172 aaKnown RBP8.68□□□□□ -1.02
VPS61YDR136C YGL015CP33199 130 aa8.66□□□□□ -1.02
VPS61YDR136C GCN2P15442 1659 aa8.65□□□□□ -1.02
VPS61YDR136C ARO1P08566 1588 aaKnown RBP8.64□□□□□ -1.03
VPS61YDR136C NOP2P40991 618 aaKnown RBP8.63□□□□□ -1.03
VPS61YDR136C NUP159P40477 1460 aa8.62□□□□□ -1.03
VPS61YDR136C POL5P39985 1022 aaKnown RBP8.61□□□□□ -1.03
VPS61YDR136C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
VPS61YDR136C RQC2Q12532 1038 aaKnown RBP8.61□□□□□ -1.03
VPS61YDR136C RSM7P47150 247 aa8.59□□□□□ -1.03
VPS61YDR136C SRB8P25648 1427 aa8.59□□□□□ -1.03
VPS61YDR136C GDB1Q06625 1536 aa8.59□□□□□ -1.03
VPS61YDR136C UBP10P53874 792 aaPredicted RBP8.58□□□□□ -1.04
VPS61YDR136C PDR5P33302 1511 aaKnown RBP8.58□□□□□ -1.04
VPS61YDR136C PDR12Q02785 1511 aa8.57□□□□□ -1.04
VPS61YDR136C BCH2P36122 765 aa8.56□□□□□ -1.04
VPS61YDR136C ENP1P38333 483 aaKnown RBP8.55□□□□□ -1.04
VPS61YDR136C RTT106P40161 455 aa8.55□□□□□ -1.04
VPS61YDR136C YLR271WQ06152 274 aa8.55□□□□□ -1.04
VPS61YDR136C SEC3P33332 1336 aaKnown RBP8.54□□□□□ -1.04
VPS61YDR136C SPO14P36126 1683 aa8.53□□□□□ -1.04
VPS61YDR136C IQG1Q12280 1495 aa8.53□□□□□ -1.04
VPS61YDR136C MAP2P38174 421 aaKnown RBP8.5□□□□□ -1.05
VPS61YDR136C YOR093CQ12275 1648 aa8.48□□□□□ -1.05
VPS61YDR136C YRF1-1P0CX20 1796 aa8.48□□□□□ -1.05
VPS61YDR136C YRF1-5P0CX21 1796 aa8.48□□□□□ -1.05
VPS61YDR136C YRF1-8P0CX22 1796 aa8.48□□□□□ -1.05
VPS61YDR136C BBC1P47068 1157 aa8.47□□□□□ -1.05
VPS61YDR136C SCY1P53009 804 aa8.47□□□□□ -1.05
VPS61YDR136C AI2P03876 854 aa8.46□□□□□ -1.06
VPS61YDR136C SPT7P35177 1332 aa8.46□□□□□ -1.06
VPS61YDR136C MMS1Q06211 1407 aa8.46□□□□□ -1.06
VPS61YDR136C BUD3P25558 1636 aa8.44□□□□□ -1.06
VPS61YDR136C NUP157P40064 1391 aaKnown RBP8.44□□□□□ -1.06
VPS61YDR136C CHC1P22137 1653 aaKnown RBP8.43□□□□□ -1.06
VPS61YDR136C EPS1P40557 701 aa8.42□□□□□ -1.06
VPS61YDR136C YSP2Q06681 1438 aa8.42□□□□□ -1.06
VPS61YDR136C MGA2P40578 1113 aa8.4□□□□□ -1.06
VPS61YDR136C MHP1P43638 1398 aa8.39□□□□□ -1.07
VPS61YDR136C YLR419WQ06698 1435 aaKnown RBP8.38□□□□□ -1.07
VPS61YDR136C CKB1P43639 278 aa8.38□□□□□ -1.07
VPS61YDR136C NOP7P53261 605 aaKnown RBP8.38□□□□□ -1.07
VPS61YDR136C PSD2P53037 1138 aaKnown RBP8.37□□□□□ -1.07
VPS61YDR136C TY3B-IQ7LHG5 1498 aaKnown RBP8.37□□□□□ -1.07
VPS61YDR136C SLX5P32828 619 aaKnown RBP8.36□□□□□ -1.07
VPS61YDR136C BDF1P35817 686 aa8.36□□□□□ -1.07
VPS61YDR136C MET10P39692 1035 aa8.35□□□□□ -1.07
VPS61YDR136C BUD21Q08492 214 aaPredicted RBP8.35□□□□□ -1.07
VPS61YDR136C LTE1P07866 1435 aa8.34□□□□□ -1.07
VPS61YDR136C MET5P47169 1442 aa8.34□□□□□ -1.07
VPS61YDR136C SEC7P11075 2009 aaKnown RBP8.31□□□□□ -1.08
VPS61YDR136C PRS1P32895 427 aaKnown RBP8.3□□□□□ -1.08
VPS61YDR136C VMR1P38735 1592 aa8.3□□□□□ -1.08
VPS61YDR136C RAV1P47104 1357 aa8.28□□□□□ -1.08
VPS61YDR136C PAF1P38351 445 aa8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms