RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeastyeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMR1YDL156W TOP1P04786 769 aa8.75□□□□□ -1.01
CMR1YDL156W PBS2P08018 668 aa8.71□□□□□ -1.02
CMR1YDL156W IOC2Q12072 812 aa8.7□□□□□ -1.02
CMR1YDL156W GLC3P32775 704 aa8.69□□□□□ -1.02
CMR1YDL156W RAM2P29703 316 aa8.69□□□□□ -1.02
CMR1YDL156W SUB2Q07478 446 aaKnown RBP8.69□□□□□ -1.02
CMR1YDL156W SNU71P53207 620 aaKnown RBP8.68□□□□□ -1.02
CMR1YDL156W GUA1P38625 525 aaKnown RBP8.67□□□□□ -1.02
CMR1YDL156W EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
CMR1YDL156W PIB1Q06651 286 aa8.65□□□□□ -1.02
CMR1YDL156W MAM3Q12296 706 aa8.65□□□□□ -1.02
CMR1YDL156W MRX12P47084 519 aa8.65□□□□□ -1.03
CMR1YDL156W PSD2P53037 1138 aaKnown RBP8.65□□□□□ -1.03
CMR1YDL156W YRB30P53107 440 aaPredicted RBP8.65□□□□□ -1.03
CMR1YDL156W HPC2Q01448 625 aa8.65□□□□□ -1.03
CMR1YDL156W MSB4Q12317 492 aa8.64□□□□□ -1.03
CMR1YDL156W SLD2P34252 453 aa8.63□□□□□ -1.03
CMR1YDL156W MAK21Q12176 1025 aaKnown RBP8.6□□□□□ -1.03
CMR1YDL156W MET10P39692 1035 aa8.58□□□□□ -1.04
CMR1YDL156W BRL1P38770 471 aa8.57□□□□□ -1.04
CMR1YDL156W RTG1P32607 177 aa8.56□□□□□ -1.04
CMR1YDL156W PAM1P37304 830 aaKnown RBP8.56□□□□□ -1.04
CMR1YDL156W TFB3Q03290 321 aa8.56□□□□□ -1.04
CMR1YDL156W NCR1Q12200 1170 aa8.56□□□□□ -1.04
CMR1YDL156W IES2P40154 320 aa8.55□□□□□ -1.04
CMR1YDL156W DIT2P21595 489 aa8.52□□□□□ -1.04
CMR1YDL156W NUP42P49686 430 aaKnown RBP8.52□□□□□ -1.04
CMR1YDL156W YTA7P40340 1379 aa8.52□□□□□ -1.05
CMR1YDL156W SSA4P22202 642 aaKnown RBP8.52□□□□□ -1.05
CMR1YDL156W MRM1P25270 412 aa8.52□□□□□ -1.05
CMR1YDL156W SET4P42948 560 aa8.51□□□□□ -1.05
CMR1YDL156W TRP5P00931 707 aaKnown RBP8.5□□□□□ -1.05
CMR1YDL156W BRN1P38170 754 aa8.5□□□□□ -1.05
CMR1YDL156W ATF2P53296 535 aa8.49□□□□□ -1.05
CMR1YDL156W YOL036WQ08206 761 aa8.49□□□□□ -1.05
CMR1YDL156W TFG1P41895 735 aaPredicted RBP8.48□□□□□ -1.05
CMR1YDL156W YNL035CP53962 389 aaKnown RBP8.48□□□□□ -1.05
CMR1YDL156W DOS2P54858 310 aa8.48□□□□□ -1.05
CMR1YDL156W RRN6P32786 894 aa8.47□□□□□ -1.05
CMR1YDL156W SEC61P32915 480 aa8.47□□□□□ -1.05
CMR1YDL156W HEM3P28789 327 aa8.46□□□□□ -1.06
CMR1YDL156W MAK11P20484 414 aaKnown RBP8.44□□□□□ -1.06
CMR1YDL156W REF2P42073 533 aaPredicted RBP8.44□□□□□ -1.06
CMR1YDL156W CDC3P32457 520 aaKnown RBP8.43□□□□□ -1.06
CMR1YDL156W BIM1P40013 344 aa8.43□□□□□ -1.06
CMR1YDL156W PKC1P24583 1151 aa8.42□□□□□ -1.06
CMR1YDL156W FAR11P53917 953 aa8.42□□□□□ -1.06
CMR1YDL156W RPL34AP87262 121 aaPredicted RBP8.42□□□□□ -1.06
CMR1YDL156W SPC42P36094 363 aa8.41□□□□□ -1.06
CMR1YDL156W SSF1P38789 453 aaPredicted RBP8.41□□□□□ -1.06
CMR1YDL156W YMR1P47147 688 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
CMR1YDL156W SSA2P10592 639 aaKnown RBP8.4□□□□□ -1.06
CMR1YDL156W GLN1P32288 370 aaKnown RBP8.4□□□□□ -1.06
CMR1YDL156W NUG1P40010 520 aaKnown RBP8.4□□□□□ -1.06
CMR1YDL156W SEN54Q02825 467 aaPredicted RBP8.4□□□□□ -1.06
CMR1YDL156W YJL007CP47080 104 aa8.39□□□□□ -1.07
CMR1YDL156W DBP1P24784 617 aaKnown RBP8.38□□□□□ -1.07
CMR1YDL156W OCA5P38738 679 aa8.38□□□□□ -1.07
CMR1YDL156W RCR1P38212 213 aa8.37□□□□□ -1.07
CMR1YDL156W ATG32P40458 529 aa8.37□□□□□ -1.07
CMR1YDL156W ASF1P32447 279 aa8.35□□□□□ -1.07
CMR1YDL156W SUB1P54000 292 aaKnown RBP8.35□□□□□ -1.07
CMR1YDL156W RPL34BP40525 121 aaKnown RBP8.35□□□□□ -1.07
CMR1YDL156W NOP53Q12080 455 aaKnown RBP8.35□□□□□ -1.07
CMR1YDL156W BCK2P33306 851 aa8.34□□□□□ -1.07
CMR1YDL156W ATG36P46983 293 aa8.34□□□□□ -1.07
CMR1YDL156W FPR4Q06205 392 aaPredicted RBP8.34□□□□□ -1.07
CMR1YDL156W VMA1P17255 1071 aaKnown RBP8.33□□□□□ -1.08
CMR1YDL156W RTS3P53289 263 aa8.33□□□□□ -1.08
CMR1YDL156W COX6P00427 148 aa8.32□□□□□ -1.08
CMR1YDL156W SWE1P32944 819 aa8.32□□□□□ -1.08
CMR1YDL156W SAP30P38429 201 aa8.32□□□□□ -1.08
CMR1YDL156W YFR006WP43590 535 aa8.32□□□□□ -1.08
CMR1YDL156W CPS1P27614 576 aa8.31□□□□□ -1.08
CMR1YDL156W RTG3P38165 486 aa8.31□□□□□ -1.08
CMR1YDL156W SAM3Q08986 587 aa8.31□□□□□ -1.08
CMR1YDL156W COQ8P27697 501 aa8.31□□□□□ -1.08
CMR1YDL156W ITT1Q04638 464 aa8.31□□□□□ -1.08
CMR1YDL156W LAM6Q08001 693 aa8.31□□□□□ -1.08
CMR1YDL156W YAF9P53930 226 aa8.3□□□□□ -1.08
CMR1YDL156W JIP4Q03361 876 aa8.3□□□□□ -1.08
CMR1YDL156W TIF1P10081 395 aaKnown RBP8.29□□□□□ -1.08
CMR1YDL156W CHL1P22516 861 aaPredicted RBP8.29□□□□□ -1.08
CMR1YDL156W TTI1P36097 1038 aa8.29□□□□□ -1.08
CMR1YDL156W VPS29P38759 282 aa8.29□□□□□ -1.08
CMR1YDL156W VPS72Q03388 795 aa8.29□□□□□ -1.08
CMR1YDL156W NOB1Q08444 459 aaKnown RBP8.29□□□□□ -1.08
CMR1YDL156W CSN12P47130 423 aa8.28□□□□□ -1.08
CMR1YDL156W NMD2P38798 1089 aaKnown RBP8.27□□□□□ -1.09
CMR1YDL156W YDL129WQ07555 291 aa8.27□□□□□ -1.09
CMR1YDL156W HAT1Q12341 374 aa8.27□□□□□ -1.09
CMR1YDL156W ERG12P07277 443 aa8.26□□□□□ -1.09
CMR1YDL156W YJR008WP47085 338 aa8.24□□□□□ -1.09
CMR1YDL156W NNF1P47149 201 aa8.24□□□□□ -1.09
CMR1YDL156W KEX1P09620 729 aa8.22□□□□□ -1.09
CMR1YDL156W STS1P38637 319 aa8.22□□□□□ -1.09
CMR1YDL156W STM1P39015 273 aaKnown RBP8.22□□□□□ -1.09
CMR1YDL156W ALD4P46367 519 aaKnown RBP8.22□□□□□ -1.09
CMR1YDL156W DAN4P47179 1161 aa8.22□□□□□ -1.09
CMR1YDL156W YPR204WQ08995 1032 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms