RNA–Protein interactions for RNA: YDL149W

ATG9, Transcript of Transmembrane protein involved in forming Cvt and autophagic vesicles, yeastyeast

Gene ATG9, Length 2,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG9YDL149W HEM3P28789 327 aa2.56□□□□□ -2
ATG9YDL149W TFB3Q03290 321 aa2.56□□□□□ -2
ATG9YDL149W CDC3P32457 520 aaKnown RBP2.55□□□□□ -2
ATG9YDL149W PPG1P32838 368 aa2.55□□□□□ -2
ATG9YDL149W SIS2P36024 562 aa2.55□□□□□ -2
ATG9YDL149W NAB3P38996 802 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
ATG9YDL149W FAR11P53917 953 aa2.55□□□□□ -2
ATG9YDL149W PAM1P37304 830 aaKnown RBP2.55□□□□□ -2
ATG9YDL149W SSF1P38789 453 aaPredicted RBP2.55□□□□□ -2
ATG9YDL149W ALD4P46367 519 aaKnown RBP2.55□□□□□ -2
ATG9YDL149W OXP1P28273 1286 aa2.55□□□□□ -2
ATG9YDL149W OSW7P43611 510 aa2.55□□□□□ -2
ATG9YDL149W AIM7Q12156 149 aa2.55□□□□□ -2
ATG9YDL149W SLX5P32828 619 aaKnown RBP2.54□□□□□ -2
ATG9YDL149W RRP14P36080 434 aaKnown RBP2.54□□□□□ -2
ATG9YDL149W DSF2P38213 736 aa2.54□□□□□ -2
ATG9YDL149W IES2P40154 320 aa2.54□□□□□ -2
ATG9YDL149W FPR4Q06205 392 aaPredicted RBP2.54□□□□□ -2
ATG9YDL149W AIM21P40563 679 aa2.54□□□□□ -2
ATG9YDL149W KRI1P42846 591 aaKnown RBP2.54□□□□□ -2
ATG9YDL149W YAF9P53930 226 aa2.54□□□□□ -2
ATG9YDL149W CST9Q06032 482 aa2.54□□□□□ -2
ATG9YDL149W TSR4P25040 408 aa2.53□□□□□ -2
ATG9YDL149W HAT1Q12341 374 aa2.53□□□□□ -2
ATG9YDL149W CPS1P27614 576 aa2.53□□□□□ -2
ATG9YDL149W TOM20P35180 183 aa2.53□□□□□ -2
ATG9YDL149W NMD2P38798 1089 aaKnown RBP2.53□□□□□ -2
ATG9YDL149W BIM1P40013 344 aa2.53□□□□□ -2
ATG9YDL149W YFR016CP43597 1233 aaKnown RBP2.53□□□□□ -2
ATG9YDL149W ATG36P46983 293 aa2.53□□□□□ -2
ATG9YDL149W NNF1P47149 201 aa2.53□□□□□ -2
ATG9YDL149W KIP3P53086 805 aaKnown RBP2.52□□□□□ -2.01
ATG9YDL149W PDR1P12383 1068 aa2.52□□□□□ -2.01
ATG9YDL149W HPC2Q01448 625 aa2.52□□□□□ -2.01
ATG9YDL149W RPS0BP46654 252 aaKnown RBP2.52□□□□□ -2.01
ATG9YDL149W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
ATG9YDL149W RSM7P47150 247 aa2.52□□□□□ -2.01
ATG9YDL149W ZDS1P50111 915 aaKnown RBP2.52□□□□□ -2.01
ATG9YDL149W SCY1P53009 804 aa2.52□□□□□ -2.01
ATG9YDL149W RNH70P53331 553 aa2.52□□□□□ -2.01
ATG9YDL149W DOS2P54858 310 aa2.52□□□□□ -2.01
ATG9YDL149W YPR204WQ08995 1032 aa2.52□□□□□ -2.01
ATG9YDL149W MAK21Q12176 1025 aaKnown RBP2.52□□□□□ -2.01
ATG9YDL149W PKC1P24583 1151 aa2.51□□□□□ -2.01
ATG9YDL149W TPO2P53283 614 aa2.51□□□□□ -2.01
ATG9YDL149W UBX5Q06682 500 aa2.51□□□□□ -2.01
ATG9YDL149W HIF1Q12373 385 aa2.51□□□□□ -2.01
ATG9YDL149W DIT2P21595 489 aa2.51□□□□□ -2.01
ATG9YDL149W CDC27P38042 758 aa2.51□□□□□ -2.01
ATG9YDL149W RGA1P39083 1007 aa2.51□□□□□ -2.01
ATG9YDL149W CST6P40535 587 aa2.51□□□□□ -2.01
ATG9YDL149W JIP5Q06214 492 aaPredicted RBP2.51□□□□□ -2.01
ATG9YDL149W SVF1Q05515 481 aa2.5□□□□□ -2.01
ATG9YDL149W YPR148CQ06523 435 aa2.5□□□□□ -2.01
ATG9YDL149W SPT21P35209 758 aa2.5□□□□□ -2.01
ATG9YDL149W ATG32P40458 529 aa2.5□□□□□ -2.01
ATG9YDL149W TY4A-JP47023 414 aa2.5□□□□□ -2.01
ATG9YDL149W SSA2P10592 639 aaKnown RBP2.49□□□□□ -2.01
ATG9YDL149W SRP40P32583 406 aaPredicted RBP2.49□□□□□ -2.01
ATG9YDL149W OCA5P38738 679 aa2.49□□□□□ -2.01
ATG9YDL149W RPT2P40327 437 aaKnown RBP2.49□□□□□ -2.01
ATG9YDL149W TFG1P41895 735 aaPredicted RBP2.49□□□□□ -2.01
ATG9YDL149W ECM16Q04217 1267 aaKnown RBP2.49□□□□□ -2.01
ATG9YDL149W RAM2P29703 316 aa2.49□□□□□ -2.01
ATG9YDL149W THI12P42883 340 aa2.49□□□□□ -2.01
ATG9YDL149W THI5P43534 340 aa2.49□□□□□ -2.01
ATG9YDL149W THI11P47183 340 aa2.49□□□□□ -2.01
ATG9YDL149W THI13Q07748 340 aa2.49□□□□□ -2.01
ATG9YDL149W KEX1P09620 729 aa2.49□□□□□ -2.01
ATG9YDL149W ERP2P39704 215 aa2.49□□□□□ -2.01
ATG9YDL149W ERG12P07277 443 aa2.48□□□□□ -2.01
ATG9YDL149W GAL11P19659 1081 aa2.48□□□□□ -2.01
ATG9YDL149W YKL091CP33324 310 aaKnown RBP2.48□□□□□ -2.01
ATG9YDL149W FPR3P38911 411 aaKnown RBP2.48□□□□□ -2.01
ATG9YDL149W YLR326WQ06170 240 aaKnown RBP2.48□□□□□ -2.01
ATG9YDL149W GRX7P38068 203 aa2.48□□□□□ -2.01
ATG9YDL149W YBL036CP38197 257 aa2.48□□□□□ -2.01
ATG9YDL149W STM1P39015 273 aaKnown RBP2.48□□□□□ -2.01
ATG9YDL149W OYE2Q03558 400 aaKnown RBP2.48□□□□□ -2.01
ATG9YDL149W RPA135P22138 1203 aaKnown RBP2.47□□□□□ -2.01
ATG9YDL149W SEC20P28791 383 aa2.47□□□□□ -2.01
ATG9YDL149W RTG2P32608 588 aaKnown RBP2.47□□□□□ -2.01
ATG9YDL149W TGL3P40308 642 aa2.47□□□□□ -2.01
ATG9YDL149W TOA1P32773 286 aa2.47□□□□□ -2.01
ATG9YDL149W IPL1P38991 367 aa2.47□□□□□ -2.01
ATG9YDL149W CSN12P47130 423 aa2.47□□□□□ -2.01
ATG9YDL149W TIF1P10081 395 aaKnown RBP2.46□□□□□ -2.01
ATG9YDL149W KAR1P11927 433 aa2.46□□□□□ -2.01
ATG9YDL149W NOC2P39744 710 aaKnown RBP2.46□□□□□ -2.01
ATG9YDL149W TPM2P40414 161 aa2.46□□□□□ -2.01
ATG9YDL149W REF2P42073 533 aaPredicted RBP2.46□□□□□ -2.01
ATG9YDL149W SEN54Q02825 467 aaPredicted RBP2.46□□□□□ -2.01
ATG9YDL149W YOL057WQ08225 711 aa2.46□□□□□ -2.01
ATG9YDL149W YOL098CQ12496 1037 aa2.46□□□□□ -2.01
ATG9YDL149W SSB1P11484 613 aaKnown RBP2.46□□□□□ -2.02
ATG9YDL149W SSB2P40150 613 aaKnown RBP2.46□□□□□ -2.02
ATG9YDL149W MPP10P47083 593 aaKnown RBP2.46□□□□□ -2.02
ATG9YDL149W POL32P47110 350 aa2.46□□□□□ -2.02
ATG9YDL149W POB3Q04636 552 aaKnown RBP2.46□□□□□ -2.02
ATG9YDL149W ENT2Q05785 613 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms