RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	STS1	P38637	319 aa		9.62	□□□□□ -0.87
RPN5	YDL147W	YFR006W	P43590	535 aa		9.61	□□□□□ -0.87
RPN5	YDL147W	BMT6	Q12291	365 aa		9.61	□□□□□ -0.87
RPN5	YDL147W	EDS1	P38073	919 aa		9.58	□□□□□ -0.88
RPN5	YDL147W	KIN1	P13185	1064 aa		9.57	□□□□□ -0.88
RPN5	YDL147W	HGH1	P48362	394 aa	Known RBP	9.56	□□□□□ -0.88
RPN5	YDL147W	IES2	P40154	320 aa		9.55	□□□□□ -0.88
RPN5	YDL147W	MAK21	Q12176	1025 aa	Known RBP	9.55	□□□□□ -0.88
RPN5	YDL147W	RLF2	Q12495	606 aa		9.54	□□□□□ -0.88
RPN5	YDL147W	PTC3	P34221	468 aa	Known RBP	9.53	□□□□□ -0.88
RPN5	YDL147W	GLC3	P32775	704 aa		9.52	□□□□□ -0.89
RPN5	YDL147W	AIM7	Q12156	149 aa		9.52	□□□□□ -0.89
RPN5	YDL147W	MSB4	Q12317	492 aa		9.51	□□□□□ -0.89
RPN5	YDL147W	COX6	P00427	148 aa		9.5	□□□□□ -0.89
RPN5	YDL147W	DIT2	P21595	489 aa		9.48	□□□□□ -0.89
RPN5	YDL147W	EAP1	P36041	632 aa	Known RBP	9.48	□□□□□ -0.89
RPN5	YDL147W	NUP42	P49686	430 aa	Known RBP	9.47	□□□□□ -0.89
RPN5	YDL147W	ATF2	P53296	535 aa		9.47	□□□□□ -0.89
RPN5	YDL147W	RTG1	P32607	177 aa		9.45	□□□□□ -0.9
RPN5	YDL147W	YOL036W	Q08206	761 aa		9.44	□□□□□ -0.9
RPN5	YDL147W	SET4	P42948	560 aa		9.43	□□□□□ -0.9
RPN5	YDL147W	TRP5	P00931	707 aa	Known RBP	9.42	□□□□□ -0.9
RPN5	YDL147W	ATH1	P48016	1211 aa		9.41	□□□□□ -0.9
RPN5	YDL147W	NCR1	Q12200	1170 aa		9.4	□□□□□ -0.9
RPN5	YDL147W	VMA1	P17255	1071 aa	Known RBP	9.39	□□□□□ -0.91
RPN5	YDL147W	GRE2	Q12068	342 aa	Known RBP	9.39	□□□□□ -0.91
RPN5	YDL147W	VHR2	P40041	505 aa		9.38	□□□□□ -0.91
RPN5	YDL147W	KIC1	P38692	1080 aa		9.37	□□□□□ -0.91
RPN5	YDL147W	GUT1	P32190	709 aa		9.36	□□□□□ -0.91
RPN5	YDL147W	GUA1	P38625	525 aa	Known RBP	9.35	□□□□□ -0.91
RPN5	YDL147W	YNL035C	P53962	389 aa	Known RBP	9.34	□□□□□ -0.91
RPN5	YDL147W	SEC61	P32915	480 aa		9.32	□□□□□ -0.92
RPN5	YDL147W	UBP14	P38237	781 aa	Known RBP	9.32	□□□□□ -0.92
RPN5	YDL147W	ABP1	P15891	592 aa	Known RBP	9.31	□□□□□ -0.92
RPN5	YDL147W	YDR090C	Q03193	310 aa		9.31	□□□□□ -0.92
RPN5	YDL147W	HPC2	Q01448	625 aa		9.29	□□□□□ -0.92
RPN5	YDL147W	YLR326W	Q06170	240 aa	Known RBP	9.29	□□□□□ -0.92
RPN5	YDL147W	YGR273C	P53329	174 aa		9.28	□□□□□ -0.92
RPN5	YDL147W	GYP5	Q12344	894 aa		9.28	□□□□□ -0.92
RPN5	YDL147W	RAD54	P32863	898 aa		9.27	□□□□□ -0.93
RPN5	YDL147W	SAM3	Q08986	587 aa		9.27	□□□□□ -0.93
RPN5	YDL147W	PSE1	P32337	1089 aa	Known RBP	9.24	□□□□□ -0.93
RPN5	YDL147W	BRL1	P38770	471 aa		9.23	□□□□□ -0.93
RPN5	YDL147W	KEX1	P09620	729 aa		9.22	□□□□□ -0.93
RPN5	YDL147W	SSA2	P10592	639 aa	Known RBP	9.21	□□□□□ -0.94
RPN5	YDL147W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	9.2	□□□□□ -0.94	not detected
RPN5	YDL147W	TFB3	Q03290	321 aa		9.2	□□□□□ -0.94
RPN5	YDL147W	TFG1	P41895	735 aa	Predicted RBP	9.19	□□□□□ -0.94
RPN5	YDL147W	DAN4	P47179	1161 aa		9.19	□□□□□ -0.94
RPN5	YDL147W	CSN12	P47130	423 aa		9.18	□□□□□ -0.94
RPN5	YDL147W	DCW1	P36091	449 aa		9.17	□□□□□ -0.94
RPN5	YDL147W	SAP30	P38429	201 aa		9.17	□□□□□ -0.94
RPN5	YDL147W	SOL3	P38858	249 aa		9.16	□□□□□ -0.94
RPN5	YDL147W	TEA1	P47988	759 aa		9.15	□□□□□ -0.94
RPN5	YDL147W	BCK2	P33306	851 aa		9.13	□□□□□ -0.95
RPN5	YDL147W	JIP4	Q03361	876 aa		9.12	□□□□□ -0.95
RPN5	YDL147W	HTA1	P04911	132 aa	Known RBP	9.11	□□□□□ -0.95
RPN5	YDL147W	HTA2	P04912	132 aa		9.11	□□□□□ -0.95
RPN5	YDL147W	YDL129W	Q07555	291 aa		9.1	□□□□□ -0.95
RPN5	YDL147W	CHL1	P22516	861 aa	Predicted RBP	9.09	□□□□□ -0.95
RPN5	YDL147W	ORC6	P38826	435 aa		9.09	□□□□□ -0.95
RPN5	YDL147W	RPP1B	P10622	106 aa	Known RBP	9.08	□□□□□ -0.96
RPN5	YDL147W	PKC1	P24583	1151 aa		9.07	□□□□□ -0.96
RPN5	YDL147W	CLB5	P30283	435 aa		9.07	□□□□□ -0.96
RPN5	YDL147W	AI4	P03878	556 aa		9.06	□□□□□ -0.96
RPN5	YDL147W	MPH3	P0CE00	602 aa		9.06	□□□□□ -0.96
RPN5	YDL147W	PRE3	P38624	215 aa		9.05	□□□□□ -0.96
RPN5	YDL147W	NST1	P53935	1240 aa		9.05	□□□□□ -0.96
RPN5	YDL147W	RGR1	P19263	1082 aa		9.05	□□□□□ -0.96
RPN5	YDL147W	YJL007C	P47080	104 aa		9.05	□□□□□ -0.96
RPN5	YDL147W	PTC4	P38089	393 aa		9.02	□□□□□ -0.97
RPN5	YDL147W	BIM1	P40013	344 aa		9.02	□□□□□ -0.97
RPN5	YDL147W	MVP1	P40959	511 aa	Known RBP	9.02	□□□□□ -0.97
RPN5	YDL147W	YEL023C	P39992	682 aa		9.01	□□□□□ -0.97
RPN5	YDL147W	CSC1	Q06538	782 aa		9.01	□□□□□ -0.97
RPN5	YDL147W	RPL34B	P40525	121 aa	Known RBP	9	□□□□□ -0.97
RPN5	YDL147W	YMR196W	Q04336	1088 aa		9	□□□□□ -0.97
RPN5	YDL147W	TYW1	Q08960	810 aa	Known RBP	9	□□□□□ -0.97
RPN5	YDL147W	GLN1	P32288	370 aa	Known RBP	8.99	□□□□□ -0.97
RPN5	YDL147W	KTR1	P27810	393 aa	Known RBP	8.97	□□□□□ -0.97
RPN5	YDL147W	YBL036C	P38197	257 aa		8.97	□□□□□ -0.97
RPN5	YDL147W	SLI15	P38283	698 aa		8.97	□□□□□ -0.97
RPN5	YDL147W	ILV3	P39522	585 aa	Known RBP	8.96	□□□□□ -0.98
RPN5	YDL147W	PEX21	P50091	288 aa		8.96	□□□□□ -0.98
RPN5	YDL147W	YPR109W	Q06104	294 aa		8.96	□□□□□ -0.98
RPN5	YDL147W	ATG32	P40458	529 aa		8.95	□□□□□ -0.98
RPN5	YDL147W	NIS1	P53939	407 aa		8.95	□□□□□ -0.98
RPN5	YDL147W	MMP1	Q12372	583 aa		8.95	□□□□□ -0.98
RPN5	YDL147W	HST2	P53686	357 aa		8.94	□□□□□ -0.98
RPN5	YDL147W	FPK1	P53739	893 aa		8.94	□□□□□ -0.98
RPN5	YDL147W	GAP1	P19145	602 aa	Predicted RBP	8.93	□□□□□ -0.98
RPN5	YDL147W	YDR344C	Q05510	147 aa		8.93	□□□□□ -0.98
RPN5	YDL147W	TFB4	Q12004	338 aa		8.93	□□□□□ -0.98
RPN5	YDL147W	SSA1	P10591	642 aa	Known RBP	8.92	□□□□□ -0.98
RPN5	YDL147W	PKH3	Q03306	898 aa	Predicted RBP	8.91	□□□□□ -0.98
RPN5	YDL147W	SSA4	P22202	642 aa	Known RBP	8.9	□□□□□ -0.98
RPN5	YDL147W	CDC73	Q06697	393 aa		8.9	□□□□□ -0.98
RPN5	YDL147W	SUB2	Q07478	446 aa	Known RBP	8.9	□□□□□ -0.98
RPN5	YDL147W	TIF1	P10081	395 aa	Known RBP	8.89	□□□□□ -0.99
RPN5	YDL147W	CSE4	P36012	229 aa		8.89	□□□□□ -0.99

Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms