RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C TY1B-MR1Q04214 1755 aa13.99□□□□□ -0.17
YCP4YCR004C TY1B-MR2Q04670 1755 aaKnown RBP13.99□□□□□ -0.17
YCP4YCR004C TY1B-LR1Q12088 1755 aaKnown RBP13.99□□□□□ -0.17
YCP4YCR004C TY1B-NL1Q12112 1755 aa13.99□□□□□ -0.17
YCP4YCR004C TY1B-GR1Q12141 1755 aa13.99□□□□□ -0.17
YCP4YCR004C TY1B-BLQ12490 1755 aa13.99□□□□□ -0.17
YCP4YCR004C IRC20Q06554 1556 aa13.93□□□□□ -0.18
YCP4YCR004C TSC11P40061 1430 aa13.93□□□□□ -0.18
YCP4YCR004C VTH1P40438 1549 aa13.93□□□□□ -0.18
YCP4YCR004C VTH2P40890 1549 aa13.93□□□□□ -0.18
YCP4YCR004C RPO21P04050 1733 aaKnown RBP13.93□□□□□ -0.18
YCP4YCR004C DNF2Q12675 1612 aa13.85□□□□□ -0.19
YCP4YCR004C MYO4P32492 1471 aa13.81□□□□□ -0.2
YCP4YCR004C NUP170P38181 1502 aa13.8□□□□□ -0.2
YCP4YCR004C SNT2P53127 1403 aa13.73□□□□□ -0.21
YCP4YCR004C SNQ2P32568 1501 aaKnown RBP13.71□□□□□ -0.21
YCP4YCR004C SPO14P36126 1683 aa13.71□□□□□ -0.21
YCP4YCR004C ULS1Q08562 1619 aa13.71□□□□□ -0.22
YCP4YCR004C MET10P39692 1035 aa13.69□□□□□ -0.22
YCP4YCR004C STH1P32597 1359 aa13.64□□□□□ -0.23
YCP4YCR004C DOP1Q03921 1698 aa13.63□□□□□ -0.23
YCP4YCR004C RTT106P40161 455 aa13.62□□□□□ -0.23
YCP4YCR004C YTA7P40340 1379 aa13.61□□□□□ -0.23
YCP4YCR004C YOR093CQ12275 1648 aa13.58□□□□□ -0.24
YCP4YCR004C FAP1P53971 965 aa13.58□□□□□ -0.24
YCP4YCR004C PDR12Q02785 1511 aa13.54□□□□□ -0.24
YCP4YCR004C TRM3Q07527 1436 aa13.52□□□□□ -0.25
YCP4YCR004C PDR10P51533 1564 aa13.52□□□□□ -0.25
YCP4YCR004C IQG1Q12280 1495 aa13.5□□□□□ -0.25
YCP4YCR004C MLP2P40457 1679 aa13.5□□□□□ -0.25
YCP4YCR004C GDB1Q06625 1536 aa13.48□□□□□ -0.25
YCP4YCR004C NUP157P40064 1391 aaKnown RBP13.45□□□□□ -0.26
YCP4YCR004C BUD3P25558 1636 aa13.43□□□□□ -0.26
YCP4YCR004C PDR15Q04182 1529 aaKnown RBP13.34□□□□□ -0.27
YCP4YCR004C CHC1P22137 1653 aaKnown RBP13.32□□□□□ -0.28
YCP4YCR004C ARO1P08566 1588 aaKnown RBP13.28□□□□□ -0.28
YCP4YCR004C DNF3Q12674 1656 aa13.26□□□□□ -0.29
YCP4YCR004C SAS10Q12136 610 aaPredicted RBP13.23□□□□□ -0.29
YCP4YCR004C TAF7Q05021 590 aa13.17□□□□□ -0.3
YCP4YCR004C IFH1P39520 1085 aa13.16□□□□□ -0.3
YCP4YCR004C YAP3P38749 330 aa13.14□□□□□ -0.31
YCP4YCR004C SEC7P11075 2009 aaKnown RBP13.12□□□□□ -0.31
YCP4YCR004C CAT8P39113 1433 aa13.08□□□□□ -0.32
YCP4YCR004C MAK10Q02197 733 aa13.06□□□□□ -0.32
YCP4YCR004C TY3B-GQ99315 1547 aa13.05□□□□□ -0.32
YCP4YCR004C BNR1P40450 1375 aa13.04□□□□□ -0.32
YCP4YCR004C CKB1P43639 278 aa13.03□□□□□ -0.32
YCP4YCR004C YBT1P32386 1661 aa13.01□□□□□ -0.33
YCP4YCR004C URN1Q06525 465 aaKnown RBP12.99□□□□□ -0.33
YCP4YCR004C GEA1P47102 1408 aaPredicted RBP12.98□□□□□ -0.33
YCP4YCR004C USO1P25386 1790 aa12.98□□□□□ -0.33
YCP4YCR004C YSP2Q06681 1438 aa12.97□□□□□ -0.33
YCP4YCR004C YMR196WQ04336 1088 aa12.8□□□□□ -0.36
YCP4YCR004C THI12P42883 340 aa12.77□□□□□ -0.37
YCP4YCR004C THI5P43534 340 aa12.77□□□□□ -0.37
YCP4YCR004C THI11P47183 340 aa12.77□□□□□ -0.37
YCP4YCR004C THI13Q07748 340 aa12.77□□□□□ -0.37
YCP4YCR004C TY1B-NL2Q99337 1749 aaKnown RBP12.76□□□□□ -0.37
YCP4YCR004C PRY3P47033 881 aa12.76□□□□□ -0.37
YCP4YCR004C IML1P47170 1584 aa12.76□□□□□ -0.37
YCP4YCR004C IPL1P38991 367 aa12.75□□□□□ -0.37
YCP4YCR004C SRB8P25648 1427 aa12.73□□□□□ -0.37
YCP4YCR004C NUP188P52593 1655 aaKnown RBP12.71□□□□□ -0.37
YCP4YCR004C HAP1P0CE41 1502 aa12.69□□□□□ -0.38
YCP4YCR004C BUD21Q08492 214 aaPredicted RBP12.66□□□□□ -0.38
YCP4YCR004C VMR1P38735 1592 aa12.64□□□□□ -0.39
YCP4YCR004C TYS1P36421 394 aaKnown RBP12.64□□□□□ -0.39
YCP4YCR004C YAH1Q12184 172 aaKnown RBP12.53□□□□□ -0.4
YCP4YCR004C GLN1P32288 370 aaKnown RBP12.5□□□□□ -0.41
YCP4YCR004C PDR5P33302 1511 aaKnown RBP12.5□□□□□ -0.41
YCP4YCR004C APP1P53933 587 aa12.43□□□□□ -0.42
YCP4YCR004C YIL055CP40523 627 aaKnown RBP12.42□□□□□ -0.42
YCP4YCR004C AAD16Q02895 342 aa12.41□□□□□ -0.42
YCP4YCR004C PRI1P10363 409 aa12.37□□□□□ -0.43
YCP4YCR004C MRX12P47084 519 aa12.37□□□□□ -0.43
YCP4YCR004C KRE5P22023 1365 aa12.36□□□□□ -0.43
YCP4YCR004C RIA1P53893 1110 aa12.36□□□□□ -0.43
YCP4YCR004C PTP3P40048 928 aa12.35□□□□□ -0.43
YCP4YCR004C CFT1Q06632 1357 aaKnown RBP12.3□□□□□ -0.44
YCP4YCR004C YNR029CP53729 429 aaKnown RBP12.29□□□□□ -0.44
YCP4YCR004C PDR11P40550 1411 aa12.28□□□□□ -0.44
YCP4YCR004C BCK1Q01389 1478 aa12.27□□□□□ -0.44
YCP4YCR004C YMR074CQ04773 145 aa12.25□□□□□ -0.45
YCP4YCR004C REB1P21538 810 aa12.24□□□□□ -0.45
YCP4YCR004C GCN2P15442 1659 aa12.22□□□□□ -0.45
YCP4YCR004C ENT1Q12518 454 aa12.21□□□□□ -0.45
YCP4YCR004C IKI3Q06706 1349 aaKnown RBP12.18□□□□□ -0.46
YCP4YCR004C ENV9Q08651 330 aa12.16□□□□□ -0.46
YCP4YCR004C NUP192P47054 1683 aa12.14□□□□□ -0.47
YCP4YCR004C IMH1Q06704 911 aaKnown RBP12.14□□□□□ -0.47
YCP4YCR004C CAB1Q04430 367 aa12.12□□□□□ -0.47
YCP4YCR004C SSM4P40318 1319 aa12.1□□□□□ -0.47
YCP4YCR004C YRF1-2P40105 1681 aa12.1□□□□□ -0.47
YCP4YCR004C PAF1P38351 445 aa12.09□□□□□ -0.47
YCP4YCR004C TY3B-IQ7LHG5 1498 aaKnown RBP12.08□□□□□ -0.47
YCP4YCR004C BUD31P25337 157 aaPredicted RBP12.07□□□□□ -0.48
YCP4YCR004C RAD9P14737 1309 aa12.07□□□□□ -0.48
YCP4YCR004C RAV1P47104 1357 aa12.05□□□□□ -0.48
YCP4YCR004C RRP5Q05022 1729 aaKnown RBP12.04□□□□□ -0.48
YCP4YCR004C ALD4P46367 519 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms