RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W SET4P42948 560 aa3.99□□□□□ -1.77
SNF5YBR289W NUP42P49686 430 aaKnown RBP3.99□□□□□ -1.77
SNF5YBR289W MSB4Q12317 492 aa3.99□□□□□ -1.77
SNF5YBR289W YOL036WQ08206 761 aa3.99□□□□□ -1.77
SNF5YBR289W MIF2P35201 549 aa3.98□□□□□ -1.77
SNF5YBR289W EAP1P36041 632 aaKnown RBP3.97□□□□□ -1.77
SNF5YBR289W ILV3P39522 585 aaKnown RBP3.97□□□□□ -1.77
SNF5YBR289W TRP5P00931 707 aaKnown RBP3.96□□□□□ -1.78
SNF5YBR289W YLR326WQ06170 240 aaKnown RBP3.96□□□□□ -1.78
SNF5YBR289W PBS2P08018 668 aa3.95□□□□□ -1.78
SNF5YBR289W CKB1P43639 278 aa3.95□□□□□ -1.78
SNF5YBR289W BMT6Q12291 365 aa3.95□□□□□ -1.78
SNF5YBR289W DIT2P21595 489 aa3.94□□□□□ -1.78
SNF5YBR289W RTG1P32607 177 aa3.94□□□□□ -1.78
SNF5YBR289W IFH1P39520 1085 aa3.94□□□□□ -1.78
SNF5YBR289W COX6P00427 148 aa3.93□□□□□ -1.78
SNF5YBR289W YGR273CP53329 174 aa3.93□□□□□ -1.78
SNF5YBR289W PCS60P38137 543 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SNF5YBR289W YNL035CP53962 389 aaKnown RBP3.92□□□□□ -1.78
SNF5YBR289W NCR1Q12200 1170 aa3.92□□□□□ -1.78
SNF5YBR289W GUT1P32190 709 aa3.91□□□□□ -1.78
SNF5YBR289W REF2P42073 533 aaPredicted RBP3.91□□□□□ -1.78
SNF5YBR289W GAP1P19145 602 aaPredicted RBP3.9□□□□□ -1.78
SNF5YBR289W SEC61P32915 480 aa3.9□□□□□ -1.79
SNF5YBR289W KEX1P09620 729 aa3.89□□□□□ -1.79
SNF5YBR289W DAN4P47179 1161 aa3.89□□□□□ -1.79
SNF5YBR289W VHR2P40041 505 aa3.88□□□□□ -1.79
SNF5YBR289W GYP5Q12344 894 aa3.88□□□□□ -1.79
SNF5YBR289W GRE2Q12068 342 aaKnown RBP3.88□□□□□ -1.79
SNF5YBR289W RPN1P38764 993 aaKnown RBP3.87□□□□□ -1.79
SNF5YBR289W ORC6P38826 435 aa3.87□□□□□ -1.79
SNF5YBR289W IES2P40154 320 aa3.87□□□□□ -1.79
SNF5YBR289W SPB4P25808 606 aaPredicted RBP3.86□□□□□ -1.79
SNF5YBR289W DCW1P36091 449 aa3.86□□□□□ -1.79
SNF5YBR289W YNR021WP53723 404 aaKnown RBP3.86□□□□□ -1.79
SNF5YBR289W DMA2P53924 522 aa3.86□□□□□ -1.79
SNF5YBR289W MPH3P0CE00 602 aa3.85□□□□□ -1.79
SNF5YBR289W GLC3P32775 704 aa3.85□□□□□ -1.79
SNF5YBR289W JIP4Q03361 876 aa3.85□□□□□ -1.79
SNF5YBR289W MAM3Q12296 706 aa3.85□□□□□ -1.79
SNF5YBR289W AI4P03878 556 aa3.85□□□□□ -1.79
SNF5YBR289W HTA1P04911 132 aaKnown RBP3.85□□□□□ -1.79
SNF5YBR289W HTA2P04912 132 aa3.85□□□□□ -1.79
SNF5YBR289W TFG1P41895 735 aaPredicted RBP3.85□□□□□ -1.79
SNF5YBR289W YDR344CQ05510 147 aa3.85□□□□□ -1.79
SNF5YBR289W SLI15P38283 698 aa3.84□□□□□ -1.79
SNF5YBR289W SAP30P38429 201 aa3.84□□□□□ -1.79
SNF5YBR289W TAF7Q05021 590 aa3.84□□□□□ -1.79
SNF5YBR289W ATH1P48016 1211 aa3.84□□□□□ -1.8
SNF5YBR289W KTR1P27810 393 aaKnown RBP3.83□□□□□ -1.8
SNF5YBR289W GUA1P38625 525 aaKnown RBP3.83□□□□□ -1.8
SNF5YBR289W YEL023CP39992 682 aa3.83□□□□□ -1.8
SNF5YBR289W AIM7Q12156 149 aa3.83□□□□□ -1.8
SNF5YBR289W MAK21Q12176 1025 aaKnown RBP3.83□□□□□ -1.8
SNF5YBR289W KIN1P13185 1064 aa3.82□□□□□ -1.8
SNF5YBR289W PTC4P38089 393 aa3.82□□□□□ -1.8
SNF5YBR289W YDL129WQ07555 291 aa3.82□□□□□ -1.8
SNF5YBR289W RGR1P19263 1082 aa3.81□□□□□ -1.8
SNF5YBR289W MVP1P40959 511 aaKnown RBP3.8□□□□□ -1.8
SNF5YBR289W MID1P41821 548 aa3.79□□□□□ -1.8
SNF5YBR289W PSE1P32337 1089 aaKnown RBP3.78□□□□□ -1.8
SNF5YBR289W CDC73Q06697 393 aa3.78□□□□□ -1.8
SNF5YBR289W CHL1P22516 861 aaPredicted RBP3.78□□□□□ -1.8
SNF5YBR289W PRE3P38624 215 aa3.77□□□□□ -1.81
SNF5YBR289W RAD54P32863 898 aa3.76□□□□□ -1.81
SNF5YBR289W BCK2P33306 851 aa3.76□□□□□ -1.81
SNF5YBR289W NIS1P53939 407 aa3.76□□□□□ -1.81
SNF5YBR289W PML39Q03760 334 aa3.76□□□□□ -1.81
SNF5YBR289W PKC1P24583 1151 aa3.74□□□□□ -1.81
SNF5YBR289W MPC54Q08550 464 aa3.74□□□□□ -1.81
SNF5YBR289W RAM1P22007 431 aa3.74□□□□□ -1.81
SNF5YBR289W SIT4P20604 311 aa3.73□□□□□ -1.81
SNF5YBR289W GLN1P32288 370 aaKnown RBP3.73□□□□□ -1.81
SNF5YBR289W RSC30P38781 883 aa3.72□□□□□ -1.81
SNF5YBR289W HPC2Q01448 625 aa3.71□□□□□ -1.82
SNF5YBR289W ELP4Q02884 456 aaKnown RBP3.71□□□□□ -1.82
SNF5YBR289W TYW1Q08960 810 aaKnown RBP3.71□□□□□ -1.82
SNF5YBR289W SEC2P17065 759 aa3.71□□□□□ -1.82
SNF5YBR289W SCJ1P25303 377 aa3.71□□□□□ -1.82
SNF5YBR289W TFB3Q03290 321 aa3.71□□□□□ -1.82
SNF5YBR289W YPR015CQ12531 247 aa3.71□□□□□ -1.82
SNF5YBR289W FPK1P53739 893 aa3.7□□□□□ -1.82
SNF5YBR289W ERF2Q06551 359 aa3.7□□□□□ -1.82
SNF5YBR289W VRP1P37370 817 aa3.7□□□□□ -1.82
SNF5YBR289W TY1A-DR4O74302 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-HP0C2I4 478 aaKnown RBP3.69□□□□□ -1.82
SNF5YBR289W TY1A-AP0CX57 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-PR1P0CX58 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-ORP0CX59 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-PR2P0CX60 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-DR5P0CX65 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-ER2P0CX66 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-GR3P0CX67 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-LR1P0CX68 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-MR2P0CX69 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-JR2P47099 440 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-DR1Q03856 440 aa3.69□□□□□ -1.82
SNF5YBR289W AGE1Q04412 482 aa3.69□□□□□ -1.82
SNF5YBR289W TY1A-ML1Q04706 440 aaKnown RBP3.69□□□□□ -1.82
SNF5YBR289W TY1A-BRQ12217 440 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms