RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C GEA2P39993 1459 aaKnown RBP11.46□□□□□ -0.57
MSI1YBR195C SAS10Q12136 610 aaPredicted RBP11.43□□□□□ -0.58
MSI1YBR195C VPS15P22219 1454 aa11.43□□□□□ -0.58
MSI1YBR195C SNQ2P32568 1501 aaKnown RBP11.42□□□□□ -0.58
MSI1YBR195C RPO21P04050 1733 aaKnown RBP11.42□□□□□ -0.58
MSI1YBR195C RTT106P40161 455 aa11.4□□□□□ -0.58
MSI1YBR195C YRF1-1P0CX20 1796 aa11.38□□□□□ -0.59
MSI1YBR195C YRF1-5P0CX21 1796 aa11.38□□□□□ -0.59
MSI1YBR195C YRF1-8P0CX22 1796 aa11.38□□□□□ -0.59
MSI1YBR195C SNT2P53127 1403 aa11.36□□□□□ -0.59
MSI1YBR195C DRS2P39524 1355 aa11.34□□□□□ -0.59
MSI1YBR195C TAF7Q05021 590 aa11.33□□□□□ -0.6
MSI1YBR195C MET10P39692 1035 aa11.32□□□□□ -0.6
MSI1YBR195C ITT1Q04638 464 aa11.32□□□□□ -0.6
MSI1YBR195C MLP2P40457 1679 aa11.3□□□□□ -0.6
MSI1YBR195C BFR2Q06631 534 aaKnown RBP11.3□□□□□ -0.6
MSI1YBR195C PDR15Q04182 1529 aaKnown RBP11.29□□□□□ -0.6
MSI1YBR195C BNI1P41832 1953 aa11.27□□□□□ -0.61
MSI1YBR195C ULS1Q08562 1619 aa11.26□□□□□ -0.61
MSI1YBR195C IFH1P39520 1085 aa11.25□□□□□ -0.61
MSI1YBR195C MMS1Q06211 1407 aa11.23□□□□□ -0.61
MSI1YBR195C NUP170P38181 1502 aa11.22□□□□□ -0.61
MSI1YBR195C PDR12Q02785 1511 aa11.22□□□□□ -0.61
MSI1YBR195C SPO14P36126 1683 aa11.2□□□□□ -0.62
MSI1YBR195C NUP157P40064 1391 aaKnown RBP11.18□□□□□ -0.62
MSI1YBR195C GDB1Q06625 1536 aa11.17□□□□□ -0.62
MSI1YBR195C DIP2Q12220 943 aaPredicted RBP11.16□□□□□ -0.62
MSI1YBR195C IRC20Q06554 1556 aa11.16□□□□□ -0.62
MSI1YBR195C IQG1Q12280 1495 aa11.14□□□□□ -0.63
MSI1YBR195C GEA1P47102 1408 aaPredicted RBP11.14□□□□□ -0.63
MSI1YBR195C ABP1P15891 592 aaKnown RBP11.13□□□□□ -0.63
MSI1YBR195C PDR10P51533 1564 aa11.09□□□□□ -0.63
MSI1YBR195C MIF2P35201 549 aa11.08□□□□□ -0.64
MSI1YBR195C BUD3P25558 1636 aa11.08□□□□□ -0.64
MSI1YBR195C CAT8P39113 1433 aa11.08□□□□□ -0.64
MSI1YBR195C TRM3Q07527 1436 aa11.08□□□□□ -0.64
MSI1YBR195C DOP1Q03921 1698 aa11.03□□□□□ -0.64
MSI1YBR195C TY3B-GQ99315 1547 aa11.01□□□□□ -0.65
MSI1YBR195C AVT3P36062 692 aa11.01□□□□□ -0.65
MSI1YBR195C DNF2Q12675 1612 aa11.01□□□□□ -0.65
MSI1YBR195C CKB1P43639 278 aa11□□□□□ -0.65
MSI1YBR195C YBT1P32386 1661 aa10.98□□□□□ -0.65
MSI1YBR195C ARO1P08566 1588 aaKnown RBP10.95□□□□□ -0.66
MSI1YBR195C CHC1P22137 1653 aaKnown RBP10.9□□□□□ -0.66
MSI1YBR195C BNR1P40450 1375 aa10.9□□□□□ -0.67
MSI1YBR195C YSP2Q06681 1438 aa10.89□□□□□ -0.67
MSI1YBR195C SRB8P25648 1427 aa10.86□□□□□ -0.67
MSI1YBR195C FAP1P53971 965 aa10.83□□□□□ -0.68
MSI1YBR195C SEC7P11075 2009 aaKnown RBP10.8□□□□□ -0.68
MSI1YBR195C IKI3Q06706 1349 aaKnown RBP10.8□□□□□ -0.68
MSI1YBR195C BUD21Q08492 214 aaPredicted RBP10.79□□□□□ -0.68
MSI1YBR195C YOR093CQ12275 1648 aa10.78□□□□□ -0.68
MSI1YBR195C ISW2Q08773 1120 aa10.78□□□□□ -0.68
MSI1YBR195C YAP3P38749 330 aa10.75□□□□□ -0.69
MSI1YBR195C URN1Q06525 465 aaKnown RBP10.74□□□□□ -0.69
MSI1YBR195C YFR006WP43590 535 aa10.73□□□□□ -0.69
MSI1YBR195C DNF3Q12674 1656 aa10.69□□□□□ -0.7
MSI1YBR195C SSM4P40318 1319 aa10.66□□□□□ -0.7
MSI1YBR195C TFA1P36100 482 aa10.62□□□□□ -0.71
MSI1YBR195C PRI1P10363 409 aa10.6□□□□□ -0.71
MSI1YBR195C IPL1P38991 367 aa10.6□□□□□ -0.71
MSI1YBR195C MAK10Q02197 733 aa10.59□□□□□ -0.71
MSI1YBR195C NUP188P52593 1655 aaKnown RBP10.58□□□□□ -0.72
MSI1YBR195C VMR1P38735 1592 aa10.53□□□□□ -0.72
MSI1YBR195C IML1P47170 1584 aa10.53□□□□□ -0.72
MSI1YBR195C TYS1P36421 394 aaKnown RBP10.53□□□□□ -0.72
MSI1YBR195C RPG1P38249 964 aaKnown RBP10.52□□□□□ -0.73
MSI1YBR195C PDR5P33302 1511 aaKnown RBP10.5□□□□□ -0.73
MSI1YBR195C GCN2P15442 1659 aa10.49□□□□□ -0.73
MSI1YBR195C HAP1P0CE41 1502 aa10.48□□□□□ -0.73
MSI1YBR195C PAF1P38351 445 aa10.46□□□□□ -0.73
MSI1YBR195C AAD16Q02895 342 aa10.45□□□□□ -0.74
MSI1YBR195C PDR11P40550 1411 aa10.4□□□□□ -0.75
MSI1YBR195C YMR196WQ04336 1088 aa10.39□□□□□ -0.75
MSI1YBR195C NOP7P53261 605 aaKnown RBP10.38□□□□□ -0.75
MSI1YBR195C USO1P25386 1790 aa10.37□□□□□ -0.75
MSI1YBR195C TY1B-NL2Q99337 1749 aaKnown RBP10.36□□□□□ -0.75
MSI1YBR195C RAV1P47104 1357 aa10.35□□□□□ -0.75
MSI1YBR195C MRX12P47084 519 aa10.34□□□□□ -0.75
MSI1YBR195C THI12P42883 340 aa10.33□□□□□ -0.76
MSI1YBR195C THI5P43534 340 aa10.33□□□□□ -0.76
MSI1YBR195C THI11P47183 340 aa10.33□□□□□ -0.76
MSI1YBR195C THI13Q07748 340 aa10.33□□□□□ -0.76
MSI1YBR195C KRE5P22023 1365 aa10.31□□□□□ -0.76
MSI1YBR195C RIA1P53893 1110 aa10.29□□□□□ -0.76
MSI1YBR195C RTC1Q08281 1341 aa10.29□□□□□ -0.76
MSI1YBR195C BCK1Q01389 1478 aa10.26□□□□□ -0.77
MSI1YBR195C CAB1Q04430 367 aa10.24□□□□□ -0.77
MSI1YBR195C CFT1Q06632 1357 aaKnown RBP10.24□□□□□ -0.77
MSI1YBR195C ALD4P46367 519 aaKnown RBP10.22□□□□□ -0.77
MSI1YBR195C RAD9P14737 1309 aa10.22□□□□□ -0.77
MSI1YBR195C PRY3P47033 881 aa10.2□□□□□ -0.78
MSI1YBR195C YNR029CP53729 429 aaKnown RBP10.2□□□□□ -0.78
MSI1YBR195C NAP1P25293 417 aaKnown RBP10.19□□□□□ -0.78
MSI1YBR195C ESL2P36168 1195 aa10.18□□□□□ -0.78
MSI1YBR195C NUP192P47054 1683 aa10.17□□□□□ -0.78
MSI1YBR195C RPL17AP05740 184 aaKnown RBP10.16□□□□□ -0.78
MSI1YBR195C TAF5P38129 798 aa10.16□□□□□ -0.78
MSI1YBR195C RPL17BP46990 184 aaKnown RBP10.16□□□□□ -0.78
MSI1YBR195C TAF8Q03750 510 aa10.12□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms