RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C SLD2P34252 453 aa7.71□□□□□ -1.17
SEC18YBR080C MAK21Q12176 1025 aaKnown RBP7.7□□□□□ -1.18
SEC18YBR080C AI2P03876 854 aa7.69□□□□□ -1.18
SEC18YBR080C SSA4P22202 642 aaKnown RBP7.69□□□□□ -1.18
SEC18YBR080C RTS3P53289 263 aa7.68□□□□□ -1.18
SEC18YBR080C MDG1P53885 366 aa7.68□□□□□ -1.18
SEC18YBR080C ERG12P07277 443 aa7.68□□□□□ -1.18
SEC18YBR080C ALD4P46367 519 aaKnown RBP7.68□□□□□ -1.18
SEC18YBR080C GIN4Q12263 1142 aa7.68□□□□□ -1.18
SEC18YBR080C CPS1P27614 576 aa7.65□□□□□ -1.18
SEC18YBR080C MAK11P20484 414 aaKnown RBP7.64□□□□□ -1.19
SEC18YBR080C ASF1P32447 279 aa7.64□□□□□ -1.19
SEC18YBR080C YJL007CP47080 104 aa7.64□□□□□ -1.19
SEC18YBR080C ALD2P47771 506 aa7.64□□□□□ -1.19
SEC18YBR080C CDC3P32457 520 aaKnown RBP7.64□□□□□ -1.19
SEC18YBR080C YAF9P53930 226 aa7.63□□□□□ -1.19
SEC18YBR080C RRP15Q06511 250 aaPredicted RBP7.63□□□□□ -1.19
SEC18YBR080C TIF1P10081 395 aaKnown RBP7.63□□□□□ -1.19
SEC18YBR080C OSW7P43611 510 aa7.63□□□□□ -1.19
SEC18YBR080C TTI1P36097 1038 aa7.62□□□□□ -1.19
SEC18YBR080C CST6P40535 587 aa7.61□□□□□ -1.19
SEC18YBR080C BUD21Q08492 214 aaPredicted RBP7.61□□□□□ -1.19
SEC18YBR080C IPL1P38991 367 aa7.61□□□□□ -1.19
SEC18YBR080C UBX5Q06682 500 aa7.61□□□□□ -1.19
SEC18YBR080C REF2P42073 533 aaPredicted RBP7.6□□□□□ -1.19
SEC18YBR080C YML083CQ04526 418 aa7.6□□□□□ -1.19
SEC18YBR080C SUB1P54000 292 aaKnown RBP7.59□□□□□ -1.19
SEC18YBR080C ATF2P53296 535 aa7.59□□□□□ -1.19
SEC18YBR080C VPS72Q03388 795 aa7.59□□□□□ -1.19
SEC18YBR080C KEX1P09620 729 aa7.58□□□□□ -1.2
SEC18YBR080C HAT1Q12341 374 aa7.58□□□□□ -1.2
SEC18YBR080C PDR1P12383 1068 aa7.58□□□□□ -1.2
SEC18YBR080C COX6P00427 148 aa7.57□□□□□ -1.2
SEC18YBR080C KRI1P42846 591 aaKnown RBP7.57□□□□□ -1.2
SEC18YBR080C FPR4Q06205 392 aaPredicted RBP7.57□□□□□ -1.2
SEC18YBR080C TFC8Q12308 588 aa7.57□□□□□ -1.2
SEC18YBR080C KTR1P27810 393 aaKnown RBP7.56□□□□□ -1.2
SEC18YBR080C NMD2P38798 1089 aaKnown RBP7.56□□□□□ -1.2
SEC18YBR080C PUP1P25043 261 aa7.55□□□□□ -1.2
SEC18YBR080C RPL34AP87262 121 aaPredicted RBP7.55□□□□□ -1.2
SEC18YBR080C COQ8P27697 501 aa7.54□□□□□ -1.2
SEC18YBR080C HOP09932 586 aa7.54□□□□□ -1.2
SEC18YBR080C ATE1P16639 503 aa7.54□□□□□ -1.2
SEC18YBR080C BIO2P32451 375 aa7.53□□□□□ -1.2
SEC18YBR080C ITT1Q04638 464 aa7.53□□□□□ -1.2
SEC18YBR080C DCD1P06773 312 aa7.52□□□□□ -1.21
SEC18YBR080C MAG2Q06436 670 aaKnown RBP7.52□□□□□ -1.21
SEC18YBR080C MRM1P25270 412 aa7.52□□□□□ -1.21
SEC18YBR080C RNH70P53331 553 aa7.52□□□□□ -1.21
SEC18YBR080C SSA2P10592 639 aaKnown RBP7.51□□□□□ -1.21
SEC18YBR080C CSN12P47130 423 aa7.5□□□□□ -1.21
SEC18YBR080C TOM20P35180 183 aa7.5□□□□□ -1.21
SEC18YBR080C ZDS1P50111 915 aaKnown RBP7.5□□□□□ -1.21
SEC18YBR080C YFR016CP43597 1233 aaKnown RBP7.49□□□□□ -1.21
SEC18YBR080C PMC1P38929 1173 aaPredicted RBP7.48□□□□□ -1.21
SEC18YBR080C NNF1P47149 201 aa7.48□□□□□ -1.21
SEC18YBR080C YPR204WQ08995 1032 aa7.48□□□□□ -1.21
SEC18YBR080C RTG2P32608 588 aaKnown RBP7.47□□□□□ -1.21
SEC18YBR080C YDR090CQ03193 310 aa7.47□□□□□ -1.21
SEC18YBR080C STB3Q12427 513 aa7.47□□□□□ -1.21
SEC18YBR080C NOP53Q12080 455 aaKnown RBP7.46□□□□□ -1.22
SEC18YBR080C EDS1P38073 919 aa7.45□□□□□ -1.22
SEC18YBR080C RTG3P38165 486 aa7.45□□□□□ -1.22
SEC18YBR080C ISW1P38144 1129 aa7.44□□□□□ -1.22
SEC18YBR080C TSR3Q12094 313 aaKnown RBP7.44□□□□□ -1.22
SEC18YBR080C YOL098CQ12496 1037 aa7.44□□□□□ -1.22
SEC18YBR080C WHI5Q12416 295 aa7.44□□□□□ -1.22
SEC18YBR080C MSC6Q08818 692 aaKnown RBP7.43□□□□□ -1.22
SEC18YBR080C BCH2P36122 765 aa7.43□□□□□ -1.22
SEC18YBR080C STM1P39015 273 aaKnown RBP7.43□□□□□ -1.22
SEC18YBR080C IOC3P43596 787 aa7.43□□□□□ -1.22
SEC18YBR080C CIT2P08679 460 aa7.42□□□□□ -1.22
SEC18YBR080C UBP14P38237 781 aaKnown RBP7.42□□□□□ -1.22
SEC18YBR080C VPS29P38759 282 aa7.42□□□□□ -1.22
SEC18YBR080C TRL1P09880 827 aaKnown RBP7.41□□□□□ -1.22
SEC18YBR080C SUP45P12385 437 aaKnown RBP7.41□□□□□ -1.22
SEC18YBR080C ERP5P38819 212 aa7.41□□□□□ -1.22
SEC18YBR080C TSR4P25040 408 aa7.4□□□□□ -1.22
SEC18YBR080C YBL113CQ7M4S9 792 aa7.4□□□□□ -1.22
SEC18YBR080C MAK16P10962 306 aaPredicted RBP7.4□□□□□ -1.23
SEC18YBR080C SVF1Q05515 481 aa7.4□□□□□ -1.23
SEC18YBR080C RPL34BP40525 121 aaKnown RBP7.39□□□□□ -1.23
SEC18YBR080C BBC1P47068 1157 aa7.39□□□□□ -1.23
SEC18YBR080C YNL108CP53929 270 aa7.39□□□□□ -1.23
SEC18YBR080C MRX10Q05648 414 aa7.39□□□□□ -1.23
SEC18YBR080C NAB3P38996 802 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SEC18YBR080C TYW1Q08960 810 aaKnown RBP7.39□□□□□ -1.23
SEC18YBR080C BRE1Q07457 700 aaKnown RBP7.38□□□□□ -1.23
SEC18YBR080C GRX4P32642 244 aa7.38□□□□□ -1.23
SEC18YBR080C TPM2P40414 161 aa7.38□□□□□ -1.23
SEC18YBR080C POL32P47110 350 aa7.38□□□□□ -1.23
SEC18YBR080C ALG12P53730 551 aa7.38□□□□□ -1.23
SEC18YBR080C SEC20P28791 383 aa7.37□□□□□ -1.23
SEC18YBR080C YOL057WQ08225 711 aa7.37□□□□□ -1.23
SEC18YBR080C ENO1P00924 437 aaKnown RBP7.36□□□□□ -1.23
SEC18YBR080C TPS3P38426 1054 aaKnown RBP7.36□□□□□ -1.23
SEC18YBR080C SEC8P32855 1065 aa7.36□□□□□ -1.23
SEC18YBR080C ENP1P38333 483 aaKnown RBP7.36□□□□□ -1.23
SEC18YBR080C AAD16Q02895 342 aa7.36□□□□□ -1.23
SEC18YBR080C TGL4P36165 910 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms