RNA–Protein interactions for RNA: RPR1

RPR1, Transcript of RNA component of nuclear RNase P, yeastyeast

Gene RPR1, Length 369 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPR1RPR1 TY1B-ER2Q03619 1755 aa12.38□□□□□ -0.43
RPR1RPR1 TY1B-MR1Q04214 1755 aa12.38□□□□□ -0.43
RPR1RPR1 TY1B-MR2Q04670 1755 aaKnown RBP12.38□□□□□ -0.43
RPR1RPR1 TY1B-LR1Q12088 1755 aaKnown RBP12.38□□□□□ -0.43
RPR1RPR1 TY1B-NL1Q12112 1755 aa12.38□□□□□ -0.43
RPR1RPR1 TY1B-GR1Q12141 1755 aa12.38□□□□□ -0.43
RPR1RPR1 TY1B-BLQ12490 1755 aa12.38□□□□□ -0.43
RPR1RPR1 VTH1P40438 1549 aa12.36□□□□□ -0.43
RPR1RPR1 VTH2P40890 1549 aa12.36□□□□□ -0.43
RPR1RPR1 NTE1Q04958 1679 aa12.35□□□□□ -0.43
RPR1RPR1 RPO21P04050 1733 aaKnown RBP12.29□□□□□ -0.44
RPR1RPR1 DNF2Q12675 1612 aa12.29□□□□□ -0.44
RPR1RPR1 MYO4P32492 1471 aa12.26□□□□□ -0.45
RPR1RPR1 SNT2P53127 1403 aa12.25□□□□□ -0.45
RPR1RPR1 NUP170P38181 1502 aa12.24□□□□□ -0.45
RPR1RPR1 MET10P39692 1035 aa12.24□□□□□ -0.45
RPR1RPR1 SNQ2P32568 1501 aaKnown RBP12.16□□□□□ -0.46
RPR1RPR1 RTT106P40161 455 aa12.12□□□□□ -0.47
RPR1RPR1 ULS1Q08562 1619 aa12.11□□□□□ -0.47
RPR1RPR1 SPO14P36126 1683 aa12.11□□□□□ -0.47
RPR1RPR1 STH1P32597 1359 aa12.1□□□□□ -0.47
RPR1RPR1 YTA7P40340 1379 aa12.06□□□□□ -0.48
RPR1RPR1 YOR093CQ12275 1648 aa12.05□□□□□ -0.48
RPR1RPR1 DOP1Q03921 1698 aa12.05□□□□□ -0.48
RPR1RPR1 PDR12Q02785 1511 aa12.03□□□□□ -0.48
RPR1RPR1 IQG1Q12280 1495 aa12.02□□□□□ -0.49
RPR1RPR1 TRM3Q07527 1436 aa12□□□□□ -0.49
RPR1RPR1 NUP157P40064 1391 aaKnown RBP11.99□□□□□ -0.49
RPR1RPR1 PDR10P51533 1564 aa11.99□□□□□ -0.49
RPR1RPR1 GDB1Q06625 1536 aa11.95□□□□□ -0.5
RPR1RPR1 PDR15Q04182 1529 aaKnown RBP11.87□□□□□ -0.51
RPR1RPR1 BUD3P25558 1636 aa11.86□□□□□ -0.51
RPR1RPR1 MLP2P40457 1679 aa11.85□□□□□ -0.51
RPR1RPR1 ARO1P08566 1588 aaKnown RBP11.83□□□□□ -0.52
RPR1RPR1 SAS10Q12136 610 aaPredicted RBP11.76□□□□□ -0.53
RPR1RPR1 YAP3P38749 330 aa11.75□□□□□ -0.53
RPR1RPR1 DNF3Q12674 1656 aa11.75□□□□□ -0.53
RPR1RPR1 CHC1P22137 1653 aaKnown RBP11.74□□□□□ -0.53
RPR1RPR1 IFH1P39520 1085 aa11.71□□□□□ -0.53
RPR1RPR1 MAK10Q02197 733 aa11.68□□□□□ -0.54
RPR1RPR1 TAF7Q05021 590 aa11.64□□□□□ -0.55
RPR1RPR1 CKB1P43639 278 aa11.61□□□□□ -0.55
RPR1RPR1 TY3B-GQ99315 1547 aa11.6□□□□□ -0.55
RPR1RPR1 SEC7P11075 2009 aaKnown RBP11.6□□□□□ -0.55
RPR1RPR1 BNR1P40450 1375 aa11.6□□□□□ -0.55
RPR1RPR1 CAT8P39113 1433 aa11.58□□□□□ -0.56
RPR1RPR1 YSP2Q06681 1438 aa11.58□□□□□ -0.56
RPR1RPR1 URN1Q06525 465 aaKnown RBP11.54□□□□□ -0.56
RPR1RPR1 GEA1P47102 1408 aaPredicted RBP11.52□□□□□ -0.56
RPR1RPR1 YBT1P32386 1661 aa11.46□□□□□ -0.58
RPR1RPR1 USO1P25386 1790 aa11.45□□□□□ -0.58
RPR1RPR1 THI12P42883 340 aa11.43□□□□□ -0.58
RPR1RPR1 THI5P43534 340 aa11.43□□□□□ -0.58
RPR1RPR1 THI11P47183 340 aa11.43□□□□□ -0.58
RPR1RPR1 THI13Q07748 340 aa11.43□□□□□ -0.58
RPR1RPR1 YMR196WQ04336 1088 aa11.41□□□□□ -0.58
RPR1RPR1 IPL1P38991 367 aa11.39□□□□□ -0.59
RPR1RPR1 TYS1P36421 394 aaKnown RBP11.32□□□□□ -0.6
RPR1RPR1 IML1P47170 1584 aa11.29□□□□□ -0.6
RPR1RPR1 SRB8P25648 1427 aa11.28□□□□□ -0.6
RPR1RPR1 BUD21Q08492 214 aaPredicted RBP11.25□□□□□ -0.61
RPR1RPR1 TY1B-NL2Q99337 1749 aaKnown RBP11.25□□□□□ -0.61
RPR1RPR1 HAP1P0CE41 1502 aa11.25□□□□□ -0.61
RPR1RPR1 GLN1P32288 370 aaKnown RBP11.24□□□□□ -0.61
RPR1RPR1 VMR1P38735 1592 aa11.24□□□□□ -0.61
RPR1RPR1 NUP188P52593 1655 aaKnown RBP11.24□□□□□ -0.61
RPR1RPR1 YAH1Q12184 172 aaKnown RBP11.21□□□□□ -0.61
RPR1RPR1 APP1P53933 587 aa11.16□□□□□ -0.62
RPR1RPR1 YIL055CP40523 627 aaKnown RBP11.13□□□□□ -0.63
RPR1RPR1 PDR5P33302 1511 aaKnown RBP11.13□□□□□ -0.63
RPR1RPR1 PTP3P40048 928 aa11.06□□□□□ -0.64
RPR1RPR1 KRE5P22023 1365 aa11.02□□□□□ -0.65
RPR1RPR1 RIA1P53893 1110 aa11.01□□□□□ -0.65
RPR1RPR1 PRI1P10363 409 aa10.99□□□□□ -0.65
RPR1RPR1 MRX12P47084 519 aa10.99□□□□□ -0.65
RPR1RPR1 CFT1Q06632 1357 aaKnown RBP10.96□□□□□ -0.65
RPR1RPR1 YNR029CP53729 429 aaKnown RBP10.96□□□□□ -0.65
RPR1RPR1 REB1P21538 810 aa10.95□□□□□ -0.66
RPR1RPR1 YMR074CQ04773 145 aa10.95□□□□□ -0.66
RPR1RPR1 PDR11P40550 1411 aa10.94□□□□□ -0.66
RPR1RPR1 BCK1Q01389 1478 aa10.93□□□□□ -0.66
RPR1RPR1 ENT1Q12518 454 aa10.92□□□□□ -0.66
RPR1RPR1 ENV9Q08651 330 aa10.88□□□□□ -0.67
RPR1RPR1 CAB1Q04430 367 aa10.81□□□□□ -0.68
RPR1RPR1 IMH1Q06704 911 aaKnown RBP10.81□□□□□ -0.68
RPR1RPR1 BUD31P25337 157 aaPredicted RBP10.8□□□□□ -0.68
RPR1RPR1 IKI3Q06706 1349 aaKnown RBP10.78□□□□□ -0.68
RPR1RPR1 TY3B-IQ7LHG5 1498 aaKnown RBP10.77□□□□□ -0.69
RPR1RPR1 SSM4P40318 1319 aa10.76□□□□□ -0.69
RPR1RPR1 GCN2P15442 1659 aa10.76□□□□□ -0.69
RPR1RPR1 RAD9P14737 1309 aa10.75□□□□□ -0.69
RPR1RPR1 ALD4P46367 519 aaKnown RBP10.73□□□□□ -0.69
RPR1RPR1 RAV1P47104 1357 aa10.69□□□□□ -0.7
RPR1RPR1 PRP45P28004 379 aaPredicted RBP10.69□□□□□ -0.7
RPR1RPR1 NUP192P47054 1683 aa10.67□□□□□ -0.7
RPR1RPR1 PAF1P38351 445 aa10.67□□□□□ -0.7
RPR1RPR1 LEU3P08638 886 aa10.64□□□□□ -0.71
RPR1RPR1 TAF5P38129 798 aa10.64□□□□□ -0.71
RPR1RPR1 UBP1P25037 809 aa10.63□□□□□ -0.71
RPR1RPR1 RPN11P43588 306 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms