RNA–Protein interactions for RNA: ENST00000641281.1

CCDC196-208, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,018 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-208ENST00000641281 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
CCDC196-208ENST00000641281 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
CCDC196-208ENST00000641281 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
CCDC196-208ENST00000641281 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
CCDC196-208ENST00000641281 POTEHQ6S545 545 aa14.05□□□□□ -0.16
CCDC196-208ENST00000641281 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
CCDC196-208ENST00000641281 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
CCDC196-208ENST00000641281 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
CCDC196-208ENST00000641281 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
CCDC196-208ENST00000641281 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
CCDC196-208ENST00000641281 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
CCDC196-208ENST00000641281 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.19
CCDC196-208ENST00000641281 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
CCDC196-208ENST00000641281 CFTRP13569 1480 aa13.86□□□□□ -0.19
CCDC196-208ENST00000641281 FKBP8Q14318 412 aa13.85□□□□□ -0.19
CCDC196-208ENST00000641281 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
CCDC196-208ENST00000641281 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
CCDC196-208ENST00000641281 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
CCDC196-208ENST00000641281 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC196-208ENST00000641281 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
CCDC196-208ENST00000641281 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
CCDC196-208ENST00000641281 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
CCDC196-208ENST00000641281 WIZO95785 1651 aa13.69□□□□□ -0.22
CCDC196-208ENST00000641281 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC196-208ENST00000641281 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
CCDC196-208ENST00000641281 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
CCDC196-208ENST00000641281 EIF4G3O43432 1585 aaKnown RBP13.63□□□□□ -0.23
CCDC196-208ENST00000641281 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CCDC196-208ENST00000641281 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
CCDC196-208ENST00000641281 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
CCDC196-208ENST00000641281 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
CCDC196-208ENST00000641281 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
CCDC196-208ENST00000641281 CHD1O14646 1710 aa13.57□□□□□ -0.24
CCDC196-208ENST00000641281 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
CCDC196-208ENST00000641281 TOP2AP11388 1531 aaKnown RBP13.52□□□□□ -0.25
CCDC196-208ENST00000641281 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
CCDC196-208ENST00000641281 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
CCDC196-208ENST00000641281 HAX1O00165 279 aa13.5□□□□□ -0.25
CCDC196-208ENST00000641281 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
CCDC196-208ENST00000641281 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
CCDC196-208ENST00000641281 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
CCDC196-208ENST00000641281 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
CCDC196-208ENST00000641281 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
CCDC196-208ENST00000641281 SOGA1O94964 1423 aa13.46□□□□□ -0.26
CCDC196-208ENST00000641281 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
CCDC196-208ENST00000641281 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
CCDC196-208ENST00000641281 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
CCDC196-208ENST00000641281 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
CCDC196-208ENST00000641281 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
CCDC196-208ENST00000641281 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
CCDC196-208ENST00000641281 MAGI1Q96QZ7 1491 aaPredicted RBP13.41□□□□□ -0.26
CCDC196-208ENST00000641281 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
CCDC196-208ENST00000641281 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
CCDC196-208ENST00000641281 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CCDC196-208ENST00000641281 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CCDC196-208ENST00000641281 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
CCDC196-208ENST00000641281 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
CCDC196-208ENST00000641281 EVX2Q03828 476 aa13.32□□□□□ -0.28
CCDC196-208ENST00000641281 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
CCDC196-208ENST00000641281 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
CCDC196-208ENST00000641281 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC196-208ENST00000641281 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
CCDC196-208ENST00000641281 ERCC6L2Q5T890 1561 aa13.26□□□□□ -0.29
CCDC196-208ENST00000641281 MIER1Q8N108 512 aa13.26□□□□□ -0.29
CCDC196-208ENST00000641281 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
CCDC196-208ENST00000641281 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
CCDC196-208ENST00000641281 ABCC10Q5T3U5 1492 aa13.23□□□□□ -0.29
CCDC196-208ENST00000641281 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
CCDC196-208ENST00000641281 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
CCDC196-208ENST00000641281 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
CCDC196-208ENST00000641281 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
CCDC196-208ENST00000641281 NUP160Q12769 1436 aa13.17□□□□□ -0.3
CCDC196-208ENST00000641281 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
CCDC196-208ENST00000641281 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
CCDC196-208ENST00000641281 KDM6BO15054 1643 aa13.15□□□□□ -0.3
CCDC196-208ENST00000641281 PRG4Q92954 1404 aaPredicted RBP13.14□□□□□ -0.31
CCDC196-208ENST00000641281 CUX1P39880 1505 aa13.14□□□□□ -0.31
CCDC196-208ENST00000641281 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
CCDC196-208ENST00000641281 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
CCDC196-208ENST00000641281 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
CCDC196-208ENST00000641281 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CCDC196-208ENST00000641281 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
CCDC196-208ENST00000641281 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
CCDC196-208ENST00000641281 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
CCDC196-208ENST00000641281 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
CCDC196-208ENST00000641281 HECW2Q9P2P5 1572 aa13.08□□□□□ -0.32
CCDC196-208ENST00000641281 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
CCDC196-208ENST00000641281 GABBR2O75899 941 aa13.07□□□□□ -0.32
CCDC196-208ENST00000641281 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
CCDC196-208ENST00000641281 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
CCDC196-208ENST00000641281 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CCDC196-208ENST00000641281 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
CCDC196-208ENST00000641281 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
CCDC196-208ENST00000641281 ADAMTS12P58397 1594 aa13□□□□□ -0.33
CCDC196-208ENST00000641281 LMTK3Q96Q04 1460 aa12.99□□□□□ -0.33
CCDC196-208ENST00000641281 CLCN6P51797 869 aa12.99□□□□□ -0.33
CCDC196-208ENST00000641281 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
CCDC196-208ENST00000641281 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
CCDC196-208ENST00000641281 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
CCDC196-208ENST00000641281 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms