RNA–Protein interactions for RNA: ENST00000641281.1

CCDC196-208, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,018 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-208ENST00000641281 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
CCDC196-208ENST00000641281 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
CCDC196-208ENST00000641281 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
CCDC196-208ENST00000641281 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
CCDC196-208ENST00000641281 FOXD1Q16676 465 aa20.33■□□□□ 0.85
CCDC196-208ENST00000641281 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
CCDC196-208ENST00000641281 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
CCDC196-208ENST00000641281 ADRA2BP18089 450 aa19.26■□□□□ 0.67
CCDC196-208ENST00000641281 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
CCDC196-208ENST00000641281 MSH5O43196 834 aa18.92■□□□□ 0.62
CCDC196-208ENST00000641281 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
CCDC196-208ENST00000641281 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
CCDC196-208ENST00000641281 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
CCDC196-208ENST00000641281 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
CCDC196-208ENST00000641281 PPP4R3CPQ6ZMV5 832 aa17.55■□□□□ 0.4
CCDC196-208ENST00000641281 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
CCDC196-208ENST00000641281 ABCC9O60706 1549 aa17.21■□□□□ 0.35
CCDC196-208ENST00000641281 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
CCDC196-208ENST00000641281 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
CCDC196-208ENST00000641281 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
CCDC196-208ENST00000641281 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
CCDC196-208ENST00000641281 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
CCDC196-208ENST00000641281 KCNA4P22459 653 aa16.75■□□□□ 0.27
CCDC196-208ENST00000641281 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
CCDC196-208ENST00000641281 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
CCDC196-208ENST00000641281 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
CCDC196-208ENST00000641281 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
CCDC196-208ENST00000641281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC196-208ENST00000641281 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
CCDC196-208ENST00000641281 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
CCDC196-208ENST00000641281 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC196-208ENST00000641281 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
CCDC196-208ENST00000641281 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
CCDC196-208ENST00000641281 SLC4A1APQ9BWU0 796 aaKnown RBP15.91■□□□□ 0.14
CCDC196-208ENST00000641281 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
CCDC196-208ENST00000641281 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
CCDC196-208ENST00000641281 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
CCDC196-208ENST00000641281 NACADO15069 1562 aa15.78■□□□□ 0.12
CCDC196-208ENST00000641281 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
CCDC196-208ENST00000641281 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
CCDC196-208ENST00000641281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
CCDC196-208ENST00000641281 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
CCDC196-208ENST00000641281 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
CCDC196-208ENST00000641281 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
CCDC196-208ENST00000641281 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
CCDC196-208ENST00000641281 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
CCDC196-208ENST00000641281 CAPN15O75808 1086 aa15.46■□□□□ 0.07
CCDC196-208ENST00000641281 APLP2Q06481 763 aa15.46■□□□□ 0.07
CCDC196-208ENST00000641281 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
CCDC196-208ENST00000641281 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
CCDC196-208ENST00000641281 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
CCDC196-208ENST00000641281 ZBTB22O15209 634 aa15.4■□□□□ 0.06
CCDC196-208ENST00000641281 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
CCDC196-208ENST00000641281 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
CCDC196-208ENST00000641281 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
CCDC196-208ENST00000641281 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
CCDC196-208ENST00000641281 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
CCDC196-208ENST00000641281 EIF4G1Q04637 1599 aaKnown RBP15.26■□□□□ 0.03
CCDC196-208ENST00000641281 DSG3P32926 999 aa15.25■□□□□ 0.03
CCDC196-208ENST00000641281 ABCB7O75027 752 aa15.14■□□□□ 0.01
CCDC196-208ENST00000641281 CUX2O14529 1486 aa15.08■□□□□ 0.01
CCDC196-208ENST00000641281 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
CCDC196-208ENST00000641281 SCRIBQ14160 1630 aa15.02□□□□□ -0.01
CCDC196-208ENST00000641281 ATXN8OSP0DMR3 200 aa15.01□□□□□ -0.01
CCDC196-208ENST00000641281 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
CCDC196-208ENST00000641281 POLA2Q14181 598 aa14.96□□□□□ -0.01
CCDC196-208ENST00000641281 ERCC6Q03468 1493 aa14.94□□□□□ -0.02
CCDC196-208ENST00000641281 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
CCDC196-208ENST00000641281 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
CCDC196-208ENST00000641281 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
CCDC196-208ENST00000641281 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
CCDC196-208ENST00000641281 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
CCDC196-208ENST00000641281 NESP48681 1621 aa14.58□□□□□ -0.08
CCDC196-208ENST00000641281 FBLN2P98095 1184 aa14.51□□□□□ -0.09
CCDC196-208ENST00000641281 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
CCDC196-208ENST00000641281 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
CCDC196-208ENST00000641281 THOC2Q8NI27 1593 aaKnown RBP14.45□□□□□ -0.1
CCDC196-208ENST00000641281 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
CCDC196-208ENST00000641281 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
CCDC196-208ENST00000641281 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
CCDC196-208ENST00000641281 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
CCDC196-208ENST00000641281 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
CCDC196-208ENST00000641281 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
CCDC196-208ENST00000641281 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CCDC196-208ENST00000641281 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CCDC196-208ENST00000641281 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CCDC196-208ENST00000641281 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
CCDC196-208ENST00000641281 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
CCDC196-208ENST00000641281 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
CCDC196-208ENST00000641281 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
CCDC196-208ENST00000641281 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
CCDC196-208ENST00000641281 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
CCDC196-208ENST00000641281 WDR62O43379 1518 aa14.17□□□□□ -0.14
CCDC196-208ENST00000641281 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
CCDC196-208ENST00000641281 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
CCDC196-208ENST00000641281 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
CCDC196-208ENST00000641281 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
CCDC196-208ENST00000641281 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
CCDC196-208ENST00000641281 RIMBP3CA6NJZ7 1639 aa14.09□□□□□ -0.15
CCDC196-208ENST00000641281 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms