RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 BCANQ96GW7 911 aa17.62■□□□□ 0.41
RBFOX1-224ENST00000641259 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
RBFOX1-224ENST00000641259 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.4
RBFOX1-224ENST00000641259 WDR62O43379 1518 aa17.58■□□□□ 0.4
RBFOX1-224ENST00000641259 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
RBFOX1-224ENST00000641259 CUL7Q14999 1698 aa17.55■□□□□ 0.4
RBFOX1-224ENST00000641259 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
RBFOX1-224ENST00000641259 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
RBFOX1-224ENST00000641259 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
RBFOX1-224ENST00000641259 AQRO60306 1485 aaKnown RBP eCLIP17.52■□□□□ 0.39
RBFOX1-224ENST00000641259 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-224ENST00000641259 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
RBFOX1-224ENST00000641259 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
RBFOX1-224ENST00000641259 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
RBFOX1-224ENST00000641259 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
RBFOX1-224ENST00000641259 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
RBFOX1-224ENST00000641259 PRKCSHP14314 528 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-224ENST00000641259 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
RBFOX1-224ENST00000641259 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
RBFOX1-224ENST00000641259 MIER1Q8N108 512 aa17.39■□□□□ 0.37
RBFOX1-224ENST00000641259 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
RBFOX1-224ENST00000641259 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
RBFOX1-224ENST00000641259 KANK4Q5T7N3 995 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-224ENST00000641259 FHOD3Q2V2M9 1422 aa17.34■□□□□ 0.37
RBFOX1-224ENST00000641259 FHAD1B1AJZ9 1412 aa17.33■□□□□ 0.37
RBFOX1-224ENST00000641259 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
RBFOX1-224ENST00000641259 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-224ENST00000641259 APLP2Q06481 763 aa17.29■□□□□ 0.36
RBFOX1-224ENST00000641259 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-224ENST00000641259 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
RBFOX1-224ENST00000641259 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
RBFOX1-224ENST00000641259 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
RBFOX1-224ENST00000641259 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
RBFOX1-224ENST00000641259 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
RBFOX1-224ENST00000641259 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
RBFOX1-224ENST00000641259 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
RBFOX1-224ENST00000641259 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-224ENST00000641259 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
RBFOX1-224ENST00000641259 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
RBFOX1-224ENST00000641259 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
RBFOX1-224ENST00000641259 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
RBFOX1-224ENST00000641259 CASKIN1Q8WXD9 1431 aa17.16■□□□□ 0.34
RBFOX1-224ENST00000641259 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-224ENST00000641259 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
RBFOX1-224ENST00000641259 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-224ENST00000641259 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
RBFOX1-224ENST00000641259 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
RBFOX1-224ENST00000641259 ITGAEP38570 1179 aa17.14■□□□□ 0.33
RBFOX1-224ENST00000641259 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
RBFOX1-224ENST00000641259 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
RBFOX1-224ENST00000641259 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
RBFOX1-224ENST00000641259 FBLN2P98095 1184 aa17.1■□□□□ 0.33
RBFOX1-224ENST00000641259 NEFLP07196 543 aa17.1■□□□□ 0.33
RBFOX1-224ENST00000641259 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
RBFOX1-224ENST00000641259 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
RBFOX1-224ENST00000641259 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-224ENST00000641259 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
RBFOX1-224ENST00000641259 KIAA0556O60303 1618 aa17.07■□□□□ 0.32
RBFOX1-224ENST00000641259 FKBP8Q14318 412 aa17.06■□□□□ 0.32
RBFOX1-224ENST00000641259 NUP160Q12769 1436 aa17.04■□□□□ 0.32
RBFOX1-224ENST00000641259 MAGI3Q5TCQ9 1506 aa17.02■□□□□ 0.32
RBFOX1-224ENST00000641259 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
RBFOX1-224ENST00000641259 CHD1O14646 1710 aa17■□□□□ 0.31
RBFOX1-224ENST00000641259 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
RBFOX1-224ENST00000641259 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-224ENST00000641259 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
RBFOX1-224ENST00000641259 HECW1Q76N89 1606 aa16.97■□□□□ 0.31
RBFOX1-224ENST00000641259 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-224ENST00000641259 NBR1Q14596 966 aa16.95■□□□□ 0.3
RBFOX1-224ENST00000641259 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
RBFOX1-224ENST00000641259 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-224ENST00000641259 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
RBFOX1-224ENST00000641259 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
RBFOX1-224ENST00000641259 NUP153P49790 1475 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-224ENST00000641259 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
RBFOX1-224ENST00000641259 RAPGEF6Q8TEU7 1601 aa16.91■□□□□ 0.3
RBFOX1-224ENST00000641259 NCOA2Q15596 1464 aa16.9■□□□□ 0.3
RBFOX1-224ENST00000641259 PLB1Q6P1J6 1458 aa16.9■□□□□ 0.3
RBFOX1-224ENST00000641259 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
RBFOX1-224ENST00000641259 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
RBFOX1-224ENST00000641259 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
RBFOX1-224ENST00000641259 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
RBFOX1-224ENST00000641259 FAM50AQ14320 339 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-224ENST00000641259 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
RBFOX1-224ENST00000641259 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
RBFOX1-224ENST00000641259 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
RBFOX1-224ENST00000641259 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-224ENST00000641259 CARMIL2Q6F5E8 1435 aa16.82■□□□□ 0.28
RBFOX1-224ENST00000641259 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
RBFOX1-224ENST00000641259 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-224ENST00000641259 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
RBFOX1-224ENST00000641259 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
RBFOX1-224ENST00000641259 DHX57Q6P158 1386 aaKnown RBP16.8■□□□□ 0.28
RBFOX1-224ENST00000641259 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
RBFOX1-224ENST00000641259 ABCA8O94911 1581 aa16.79■□□□□ 0.28
RBFOX1-224ENST00000641259 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
RBFOX1-224ENST00000641259 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
RBFOX1-224ENST00000641259 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
RBFOX1-224ENST00000641259 TRIM52Q96A61 297 aa16.77■□□□□ 0.27
RBFOX1-224ENST00000641259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms