RNA–Protein interactions for RNA: ENST00000640495.1

GOSR2-238, Transcript of golgi SNAP receptor complex member 2, human

TSL 5 BASIC

Gene GOSR2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GOSR2-238	ENST00000640495	KANK4	Q5T7N3	995 aa	Predicted RBP	11.73	□□□□□ -0.53
GOSR2-238	ENST00000640495	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.73	□□□□□ -0.53
GOSR2-238	ENST00000640495	LRRC9	Q6ZRR7	1453 aa		11.72	□□□□□ -0.53
GOSR2-238	ENST00000640495	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.72	□□□□□ -0.53
GOSR2-238	ENST00000640495	AQR	O60306	1485 aa	Known RBP eCLIP	11.72	□□□□□ -0.53	1e-6	■■■■□ 26.1
GOSR2-238	ENST00000640495	WDR97	A6NE52	1622 aa		11.72	□□□□□ -0.53
GOSR2-238	ENST00000640495	UBE2Q2	Q8WVN8	375 aa		11.71	□□□□□ -0.54
GOSR2-238	ENST00000640495	CTTNBP2	Q8WZ74	1663 aa		11.71	□□□□□ -0.54
GOSR2-238	ENST00000640495	PCF11	O94913	1555 aa	Known RBP	11.7	□□□□□ -0.54
GOSR2-238	ENST00000640495	LRRIQ1	Q96JM4	1722 aa		11.7	□□□□□ -0.54
GOSR2-238	ENST00000640495	CC2D2A	Q9P2K1	1620 aa		11.69	□□□□□ -0.54
GOSR2-238	ENST00000640495	CCDC136	Q96JN2	1154 aa		11.68	□□□□□ -0.54
GOSR2-238	ENST00000640495	EFCAB5	A4FU69	1503 aa		11.68	□□□□□ -0.54
GOSR2-238	ENST00000640495	KDM5B	Q9UGL1	1544 aa		11.68	□□□□□ -0.54
GOSR2-238	ENST00000640495	SALL2	Q9Y467	1007 aa	Predicted RBP	11.67	□□□□□ -0.54
GOSR2-238	ENST00000640495	IGF1R	P08069	1367 aa		11.67	□□□□□ -0.54
GOSR2-238	ENST00000640495	CUL7	Q14999	1698 aa		11.66	□□□□□ -0.54
GOSR2-238	ENST00000640495	RAB3GAP2	Q9H2M9	1393 aa		11.65	□□□□□ -0.54
GOSR2-238	ENST00000640495	KIF21A	Q7Z4S6	1674 aa		11.65	□□□□□ -0.54
GOSR2-238	ENST00000640495	FYCO1	Q9BQS8	1478 aa		11.65	□□□□□ -0.54
GOSR2-238	ENST00000640495	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
GOSR2-238	ENST00000640495	SETD5	Q9C0A6	1442 aa		11.64	□□□□□ -0.55
GOSR2-238	ENST00000640495	SAMD9	Q5K651	1589 aa		11.64	□□□□□ -0.55
GOSR2-238	ENST00000640495	DAXX	Q9UER7	740 aa	Predicted RBP	11.64	□□□□□ -0.55
GOSR2-238	ENST00000640495	FGD5	Q6ZNL6	1462 aa		11.63	□□□□□ -0.55
GOSR2-238	ENST00000640495	TIMELESS	Q9UNS1	1208 aa		11.63	□□□□□ -0.55
GOSR2-238	ENST00000640495	THOC2	Q8NI27	1593 aa	Known RBP	11.63	□□□□□ -0.55
GOSR2-238	ENST00000640495	PLEKHG5	O94827	1062 aa		11.62	□□□□□ -0.55
GOSR2-238	ENST00000640495	ARHGEF11	O15085	1522 aa		11.61	□□□□□ -0.55
GOSR2-238	ENST00000640495	PHLDB1	Q86UU1	1377 aa		11.61	□□□□□ -0.55
GOSR2-238	ENST00000640495	SNAPC4	Q5SXM2	1469 aa		11.6	□□□□□ -0.55
GOSR2-238	ENST00000640495	GCC2	Q8IWJ2	1684 aa		11.59	□□□□□ -0.55
GOSR2-238	ENST00000640495	ABCA10	Q8WWZ4	1543 aa		11.59	□□□□□ -0.55
GOSR2-238	ENST00000640495	POLR1A	O95602	1720 aa	Predicted RBP	11.59	□□□□□ -0.55
GOSR2-238	ENST00000640495	FHAD1	B1AJZ9	1412 aa		11.59	□□□□□ -0.55
GOSR2-238	ENST00000640495	PPP1R15A	O75807	674 aa	Predicted RBP	11.59	□□□□□ -0.55
GOSR2-238	ENST00000640495	DNMBP	Q6XZF7	1577 aa		11.58	□□□□□ -0.55
GOSR2-238	ENST00000640495	CASKIN1	Q8WXD9	1431 aa		11.58	□□□□□ -0.56
GOSR2-238	ENST00000640495	PTPN23	Q9H3S7	1636 aa		11.57	□□□□□ -0.56
GOSR2-238	ENST00000640495	HECW1	Q76N89	1606 aa		11.56	□□□□□ -0.56
GOSR2-238	ENST00000640495	ABCA5	Q8WWZ7	1642 aa		11.55	□□□□□ -0.56
GOSR2-238	ENST00000640495	CCER2	I3L3R5	266 aa		11.52	□□□□□ -0.56
GOSR2-238	ENST00000640495	CARMIL1	Q5VZK9	1371 aa		11.52	□□□□□ -0.57
GOSR2-238	ENST00000640495	CADPS	Q9ULU8	1353 aa		11.52	□□□□□ -0.57
GOSR2-238	ENST00000640495	PKNOX2	Q96KN3	472 aa		11.51	□□□□□ -0.57
GOSR2-238	ENST00000640495	HFM1	A2PYH4	1435 aa		11.51	□□□□□ -0.57
GOSR2-238	ENST00000640495	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.51	□□□□□ -0.57
GOSR2-238	ENST00000640495	DENND4B	O75064	1496 aa	Predicted RBP	11.5	□□□□□ -0.57
GOSR2-238	ENST00000640495	GRIN2B	Q13224	1484 aa		11.5	□□□□□ -0.57
GOSR2-238	ENST00000640495	TCOF1	Q13428	1488 aa	Known RBP	11.5	□□□□□ -0.57
GOSR2-238	ENST00000640495	NCOA2	Q15596	1464 aa		11.49	□□□□□ -0.57
GOSR2-238	ENST00000640495	DEK	P35659	375 aa	Known RBP	11.49	□□□□□ -0.57
GOSR2-238	ENST00000640495	AKNA	Q7Z591	1439 aa		11.49	□□□□□ -0.57
GOSR2-238	ENST00000640495	UACA	Q9BZF9	1416 aa		11.48	□□□□□ -0.57
GOSR2-238	ENST00000640495	UGGT2	Q9NYU1	1516 aa		11.48	□□□□□ -0.57
GOSR2-238	ENST00000640495	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.48	□□□□□ -0.57
GOSR2-238	ENST00000640495	FGD6	Q6ZV73	1430 aa		11.48	□□□□□ -0.57
GOSR2-238	ENST00000640495	PODXL2	Q9NZ53	605 aa		11.47	□□□□□ -0.57
GOSR2-238	ENST00000640495	RBM19	Q9Y4C8	960 aa	Known RBP	11.47	□□□□□ -0.57
GOSR2-238	ENST00000640495	KCNH8	Q96L42	1107 aa		11.46	□□□□□ -0.57
GOSR2-238	ENST00000640495	PTPRK	Q15262	1439 aa		11.46	□□□□□ -0.58
GOSR2-238	ENST00000640495	PLPPR3	Q6T4P5	718 aa		11.46	□□□□□ -0.58
GOSR2-238	ENST00000640495	EHBP1L1	Q8N3D4	1523 aa		11.45	□□□□□ -0.58
GOSR2-238	ENST00000640495	TOPBP1	Q92547	1522 aa		11.45	□□□□□ -0.58
GOSR2-238	ENST00000640495	POLA1	P09884	1462 aa	Predicted RBP	11.45	□□□□□ -0.58
GOSR2-238	ENST00000640495	CCDC18	Q5T9S5	1454 aa		11.44	□□□□□ -0.58
GOSR2-238	ENST00000640495	ERICH6B	Q5W0A0	696 aa		11.43	□□□□□ -0.58
GOSR2-238	ENST00000640495	NAIP	Q13075	1403 aa		11.43	□□□□□ -0.58
GOSR2-238	ENST00000640495	MSH5	O43196	834 aa		11.42	□□□□□ -0.58
GOSR2-238	ENST00000640495	BCAN	Q96GW7	911 aa		11.42	□□□□□ -0.58
GOSR2-238	ENST00000640495	MAGI3	Q5TCQ9	1506 aa		11.41	□□□□□ -0.58
GOSR2-238	ENST00000640495	FMN1	Q68DA7	1419 aa		11.41	□□□□□ -0.58
GOSR2-238	ENST00000640495	FANCD2	Q9BXW9	1451 aa		11.41	□□□□□ -0.58
GOSR2-238	ENST00000640495	MYT1L	Q9UL68	1186 aa		11.41	□□□□□ -0.58
GOSR2-238	ENST00000640495	FHOD3	Q2V2M9	1422 aa		11.39	□□□□□ -0.59
GOSR2-238	ENST00000640495	LAMC3	Q9Y6N6	1575 aa		11.38	□□□□□ -0.59
GOSR2-238	ENST00000640495	MYOM3	Q5VTT5	1437 aa		11.38	□□□□□ -0.59
GOSR2-238	ENST00000640495	TARBP1	Q13395	1621 aa	Known RBP	11.38	□□□□□ -0.59
GOSR2-238	ENST00000640495	KDM6B	O15054	1643 aa		11.38	□□□□□ -0.59
GOSR2-238	ENST00000640495	RTN4	Q9NQC3	1192 aa	Known RBP	11.37	□□□□□ -0.59
GOSR2-238	ENST00000640495	PBRM1	Q86U86	1689 aa		11.35	□□□□□ -0.59
GOSR2-238	ENST00000640495	SIN3A	Q96ST3	1273 aa		11.34	□□□□□ -0.59
GOSR2-238	ENST00000640495	RAD54L2	Q9Y4B4	1467 aa		11.34	□□□□□ -0.59
GOSR2-238	ENST00000640495	SENP3	Q9H4L4	574 aa	Predicted RBP	11.34	□□□□□ -0.59
GOSR2-238	ENST00000640495	URB2	Q14146	1524 aa	Known RBP	11.34	□□□□□ -0.59
GOSR2-238	ENST00000640495	NES	P48681	1621 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	WDR62	O43379	1518 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	FANCI	Q9NVI1	1328 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	DNMT1	P26358	1616 aa	Known RBP	11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	TEX14	Q8IWB6	1497 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	NCOA1	Q15788	1441 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	SPATA31E1	Q6ZUB1	1445 aa		11.31	□□□□□ -0.6
GOSR2-238	ENST00000640495	CROCC2	H7BZ55	1655 aa		11.3	□□□□□ -0.6
GOSR2-238	ENST00000640495	MBD5	Q9P267	1494 aa		11.3	□□□□□ -0.6
GOSR2-238	ENST00000640495	MIA2	Q96PC5	1412 aa		11.3	□□□□□ -0.6
GOSR2-238	ENST00000640495	DDX10	Q13206	875 aa	Known RBP	11.3	□□□□□ -0.6
GOSR2-238	ENST00000640495	RANGAP1	P46060	587 aa	Predicted RBP	11.29	□□□□□ -0.6
GOSR2-238	ENST00000640495	IL27	Q8NEV9	243 aa		11.29	□□□□□ -0.6
GOSR2-238	ENST00000640495	ADGB	Q8N7X0	1667 aa		11.28	□□□□□ -0.6
GOSR2-238	ENST00000640495	CNTLN	Q9NXG0	1405 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms