RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 SETD5Q9C0A6 1442 aa16.55■□□□□ 0.24
PAX6-243ENST00000638903 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
PAX6-243ENST00000638903 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
PAX6-243ENST00000638903 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
PAX6-243ENST00000638903 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
PAX6-243ENST00000638903 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
PAX6-243ENST00000638903 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
PAX6-243ENST00000638903 NEFLP07196 543 aa16.47■□□□□ 0.23
PAX6-243ENST00000638903 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
PAX6-243ENST00000638903 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
PAX6-243ENST00000638903 CFTRP13569 1480 aa16.45■□□□□ 0.22
PAX6-243ENST00000638903 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
PAX6-243ENST00000638903 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
PAX6-243ENST00000638903 IGF1RP08069 1367 aa16.43■□□□□ 0.22
PAX6-243ENST00000638903 RBM19Q9Y4C8 960 aaKnown RBP16.42■□□□□ 0.22
PAX6-243ENST00000638903 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
PAX6-243ENST00000638903 ANP32CO43423 234 aa16.41■□□□□ 0.22
PAX6-243ENST00000638903 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
PAX6-243ENST00000638903 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
PAX6-243ENST00000638903 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
PAX6-243ENST00000638903 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
PAX6-243ENST00000638903 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
PAX6-243ENST00000638903 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
PAX6-243ENST00000638903 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
PAX6-243ENST00000638903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.3■□□□□ 0.2
PAX6-243ENST00000638903 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
PAX6-243ENST00000638903 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
PAX6-243ENST00000638903 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
PAX6-243ENST00000638903 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
PAX6-243ENST00000638903 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
PAX6-243ENST00000638903 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
PAX6-243ENST00000638903 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
PAX6-243ENST00000638903 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
PAX6-243ENST00000638903 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
PAX6-243ENST00000638903 MSH5O43196 834 aa16.21■□□□□ 0.19
PAX6-243ENST00000638903 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
PAX6-243ENST00000638903 UACAQ9BZF9 1416 aa16.21■□□□□ 0.18
PAX6-243ENST00000638903 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
PAX6-243ENST00000638903 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
PAX6-243ENST00000638903 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
PAX6-243ENST00000638903 HFM1A2PYH4 1435 aa16.18■□□□□ 0.18
PAX6-243ENST00000638903 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
PAX6-243ENST00000638903 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
PAX6-243ENST00000638903 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
PAX6-243ENST00000638903 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
PAX6-243ENST00000638903 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
PAX6-243ENST00000638903 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
PAX6-243ENST00000638903 KDM5BQ9UGL1 1544 aa16.13■□□□□ 0.17
PAX6-243ENST00000638903 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
PAX6-243ENST00000638903 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
PAX6-243ENST00000638903 NAIPQ13075 1403 aa16.12■□□□□ 0.17
PAX6-243ENST00000638903 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
PAX6-243ENST00000638903 NESP48681 1621 aa16.11■□□□□ 0.17
PAX6-243ENST00000638903 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
PAX6-243ENST00000638903 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
PAX6-243ENST00000638903 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
PAX6-243ENST00000638903 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.17
PAX6-243ENST00000638903 CUL7Q14999 1698 aa16.08■□□□□ 0.16
PAX6-243ENST00000638903 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
PAX6-243ENST00000638903 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
PAX6-243ENST00000638903 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
PAX6-243ENST00000638903 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
PAX6-243ENST00000638903 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
PAX6-243ENST00000638903 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
PAX6-243ENST00000638903 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
PAX6-243ENST00000638903 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
PAX6-243ENST00000638903 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
PAX6-243ENST00000638903 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
PAX6-243ENST00000638903 DNMBPQ6XZF7 1577 aa16.03■□□□□ 0.16
PAX6-243ENST00000638903 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
PAX6-243ENST00000638903 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
PAX6-243ENST00000638903 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.15
PAX6-243ENST00000638903 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.15
PAX6-243ENST00000638903 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
PAX6-243ENST00000638903 CCDC184Q52MB2 194 aa16.01■□□□□ 0.15
PAX6-243ENST00000638903 HECW1Q76N89 1606 aa15.99■□□□□ 0.15
PAX6-243ENST00000638903 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
PAX6-243ENST00000638903 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
PAX6-243ENST00000638903 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
PAX6-243ENST00000638903 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
PAX6-243ENST00000638903 GCC2Q8IWJ2 1684 aa15.98■□□□□ 0.15
PAX6-243ENST00000638903 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
PAX6-243ENST00000638903 RRP7BPQ9NSQ0 103 aa15.98■□□□□ 0.15
PAX6-243ENST00000638903 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
PAX6-243ENST00000638903 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
PAX6-243ENST00000638903 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
PAX6-243ENST00000638903 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.14
PAX6-243ENST00000638903 ZBED9Q6R2W3 1325 aa15.95■□□□□ 0.14
PAX6-243ENST00000638903 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
PAX6-243ENST00000638903 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
PAX6-243ENST00000638903 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
PAX6-243ENST00000638903 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
PAX6-243ENST00000638903 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
PAX6-243ENST00000638903 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
PAX6-243ENST00000638903 CCDC7Q96M83 1385 aa15.93■□□□□ 0.14
PAX6-243ENST00000638903 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
PAX6-243ENST00000638903 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
PAX6-243ENST00000638903 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
PAX6-243ENST00000638903 KDM6BO15054 1643 aa15.91■□□□□ 0.14
PAX6-243ENST00000638903 AKNAQ7Z591 1439 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms