RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
HNRNPU-216ENST00000638716 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
HNRNPU-216ENST00000638716 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
HNRNPU-216ENST00000638716 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
HNRNPU-216ENST00000638716 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
HNRNPU-216ENST00000638716 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
HNRNPU-216ENST00000638716 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
HNRNPU-216ENST00000638716 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
HNRNPU-216ENST00000638716 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
HNRNPU-216ENST00000638716 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
HNRNPU-216ENST00000638716 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
HNRNPU-216ENST00000638716 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
HNRNPU-216ENST00000638716 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.21
HNRNPU-216ENST00000638716 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
HNRNPU-216ENST00000638716 CUL7Q14999 1698 aa13.75□□□□□ -0.21
HNRNPU-216ENST00000638716 FHOD3Q2V2M9 1422 aa13.75□□□□□ -0.21
HNRNPU-216ENST00000638716 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
HNRNPU-216ENST00000638716 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
HNRNPU-216ENST00000638716 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
HNRNPU-216ENST00000638716 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-216ENST00000638716 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
HNRNPU-216ENST00000638716 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-216ENST00000638716 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
HNRNPU-216ENST00000638716 CASKIN1Q8WXD9 1431 aa13.72□□□□□ -0.21
HNRNPU-216ENST00000638716 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.211e-7■■■■□ 25.3
HNRNPU-216ENST00000638716 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
HNRNPU-216ENST00000638716 NESP48681 1621 aa13.69□□□□□ -0.22
HNRNPU-216ENST00000638716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
HNRNPU-216ENST00000638716 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
HNRNPU-216ENST00000638716 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
HNRNPU-216ENST00000638716 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
HNRNPU-216ENST00000638716 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
HNRNPU-216ENST00000638716 SNAPC4Q5SXM2 1469 aa13.64□□□□□ -0.23
HNRNPU-216ENST00000638716 MYT1Q01538 1121 aa13.64□□□□□ -0.23
HNRNPU-216ENST00000638716 DDX10Q13206 875 aaKnown RBP13.64□□□□□ -0.23
HNRNPU-216ENST00000638716 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
HNRNPU-216ENST00000638716 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
HNRNPU-216ENST00000638716 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
HNRNPU-216ENST00000638716 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-216ENST00000638716 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-216ENST00000638716 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
HNRNPU-216ENST00000638716 CCDC18Q5T9S5 1454 aa13.59□□□□□ -0.23
HNRNPU-216ENST00000638716 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
HNRNPU-216ENST00000638716 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
HNRNPU-216ENST00000638716 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
HNRNPU-216ENST00000638716 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-216ENST00000638716 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
HNRNPU-216ENST00000638716 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
HNRNPU-216ENST00000638716 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
HNRNPU-216ENST00000638716 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
HNRNPU-216ENST00000638716 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
HNRNPU-216ENST00000638716 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
HNRNPU-216ENST00000638716 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
HNRNPU-216ENST00000638716 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
HNRNPU-216ENST00000638716 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-216ENST00000638716 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
HNRNPU-216ENST00000638716 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
HNRNPU-216ENST00000638716 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
HNRNPU-216ENST00000638716 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
HNRNPU-216ENST00000638716 NAIPQ13075 1403 aa13.52□□□□□ -0.25
HNRNPU-216ENST00000638716 CCER2I3L3R5 266 aa13.51□□□□□ -0.25
HNRNPU-216ENST00000638716 UGGT2Q9NYU1 1516 aa13.5□□□□□ -0.25
HNRNPU-216ENST00000638716 ANP32CO43423 234 aa13.5□□□□□ -0.25
HNRNPU-216ENST00000638716 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
HNRNPU-216ENST00000638716 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
HNRNPU-216ENST00000638716 MAGI3Q5TCQ9 1506 aa13.49□□□□□ -0.25
HNRNPU-216ENST00000638716 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-216ENST00000638716 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
HNRNPU-216ENST00000638716 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
HNRNPU-216ENST00000638716 GCC2Q8IWJ2 1684 aa13.48□□□□□ -0.25
HNRNPU-216ENST00000638716 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.26
HNRNPU-216ENST00000638716 FKBP8Q14318 412 aa13.45□□□□□ -0.26
HNRNPU-216ENST00000638716 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
HNRNPU-216ENST00000638716 BCANQ96GW7 911 aa13.44□□□□□ -0.26
HNRNPU-216ENST00000638716 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-216ENST00000638716 TRIM52Q96A61 297 aa13.43□□□□□ -0.26
HNRNPU-216ENST00000638716 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
HNRNPU-216ENST00000638716 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
HNRNPU-216ENST00000638716 KDM6BO15054 1643 aa13.41□□□□□ -0.26
HNRNPU-216ENST00000638716 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
HNRNPU-216ENST00000638716 CHIC2Q9UKJ5 165 aa13.4□□□□□ -0.26
HNRNPU-216ENST00000638716 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
HNRNPU-216ENST00000638716 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
HNRNPU-216ENST00000638716 NEFLP07196 543 aa13.38□□□□□ -0.27
HNRNPU-216ENST00000638716 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
HNRNPU-216ENST00000638716 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
HNRNPU-216ENST00000638716 WDR62O43379 1518 aa13.36□□□□□ -0.27
HNRNPU-216ENST00000638716 MIA2Q96PC5 1412 aa13.36□□□□□ -0.27
HNRNPU-216ENST00000638716 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
HNRNPU-216ENST00000638716 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.27
HNRNPU-216ENST00000638716 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
HNRNPU-216ENST00000638716 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
HNRNPU-216ENST00000638716 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
HNRNPU-216ENST00000638716 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
HNRNPU-216ENST00000638716 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
HNRNPU-216ENST00000638716 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
HNRNPU-216ENST00000638716 FOXD1Q16676 465 aa13.28□□□□□ -0.28
HNRNPU-216ENST00000638716 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
HNRNPU-216ENST00000638716 DAPK1P53355 1430 aa13.28□□□□□ -0.28
HNRNPU-216ENST00000638716 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms