RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
PRAMEF13-202ENST00000638454 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
PRAMEF13-202ENST00000638454 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
PRAMEF13-202ENST00000638454 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
PRAMEF13-202ENST00000638454 IGF1RP08069 1367 aa16.92■□□□□ 0.3
PRAMEF13-202ENST00000638454 CUL7Q14999 1698 aa16.91■□□□□ 0.3
PRAMEF13-202ENST00000638454 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
PRAMEF13-202ENST00000638454 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
PRAMEF13-202ENST00000638454 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
PRAMEF13-202ENST00000638454 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
PRAMEF13-202ENST00000638454 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
PRAMEF13-202ENST00000638454 ATXN8OSP0DMR3 200 aa16.84■□□□□ 0.29
PRAMEF13-202ENST00000638454 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
PRAMEF13-202ENST00000638454 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
PRAMEF13-202ENST00000638454 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
PRAMEF13-202ENST00000638454 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRAMEF13-202ENST00000638454 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
PRAMEF13-202ENST00000638454 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
PRAMEF13-202ENST00000638454 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
PRAMEF13-202ENST00000638454 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
PRAMEF13-202ENST00000638454 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
PRAMEF13-202ENST00000638454 CLIP1P30622 1438 aa16.74■□□□□ 0.27
PRAMEF13-202ENST00000638454 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
PRAMEF13-202ENST00000638454 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
PRAMEF13-202ENST00000638454 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
PRAMEF13-202ENST00000638454 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
PRAMEF13-202ENST00000638454 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
PRAMEF13-202ENST00000638454 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
PRAMEF13-202ENST00000638454 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PRAMEF13-202ENST00000638454 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
PRAMEF13-202ENST00000638454 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
PRAMEF13-202ENST00000638454 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
PRAMEF13-202ENST00000638454 APLP2Q06481 763 aa16.55■□□□□ 0.24
PRAMEF13-202ENST00000638454 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
PRAMEF13-202ENST00000638454 FBLN2P98095 1184 aa16.53■□□□□ 0.24
PRAMEF13-202ENST00000638454 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
PRAMEF13-202ENST00000638454 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.23
PRAMEF13-202ENST00000638454 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
PRAMEF13-202ENST00000638454 NUP160Q12769 1436 aa16.46■□□□□ 0.23
PRAMEF13-202ENST00000638454 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
PRAMEF13-202ENST00000638454 SAMD9Q5K651 1589 aa16.45■□□□□ 0.22
PRAMEF13-202ENST00000638454 UGGT2Q9NYU1 1516 aa16.44■□□□□ 0.22
PRAMEF13-202ENST00000638454 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
PRAMEF13-202ENST00000638454 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
PRAMEF13-202ENST00000638454 CHD1O14646 1710 aa16.4■□□□□ 0.22
PRAMEF13-202ENST00000638454 CARMIL2Q6F5E8 1435 aa16.39■□□□□ 0.21
PRAMEF13-202ENST00000638454 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
PRAMEF13-202ENST00000638454 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
PRAMEF13-202ENST00000638454 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
PRAMEF13-202ENST00000638454 CASKIN1Q8WXD9 1431 aa16.35■□□□□ 0.21
PRAMEF13-202ENST00000638454 KIAA0556O60303 1618 aa16.35■□□□□ 0.21
PRAMEF13-202ENST00000638454 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
PRAMEF13-202ENST00000638454 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
PRAMEF13-202ENST00000638454 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
PRAMEF13-202ENST00000638454 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
PRAMEF13-202ENST00000638454 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
PRAMEF13-202ENST00000638454 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
PRAMEF13-202ENST00000638454 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
PRAMEF13-202ENST00000638454 TIAM1Q13009 1591 aa16.27■□□□□ 0.19
PRAMEF13-202ENST00000638454 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
PRAMEF13-202ENST00000638454 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
PRAMEF13-202ENST00000638454 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
PRAMEF13-202ENST00000638454 CFAP43Q8NDM7 1665 aa16.25■□□□□ 0.19
PRAMEF13-202ENST00000638454 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
PRAMEF13-202ENST00000638454 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
PRAMEF13-202ENST00000638454 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
PRAMEF13-202ENST00000638454 TTBK1Q5TCY1 1321 aaPredicted RBP16.21■□□□□ 0.19
PRAMEF13-202ENST00000638454 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
PRAMEF13-202ENST00000638454 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
PRAMEF13-202ENST00000638454 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
PRAMEF13-202ENST00000638454 PTPRGP23470 1445 aa16.17■□□□□ 0.18
PRAMEF13-202ENST00000638454 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
PRAMEF13-202ENST00000638454 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
PRAMEF13-202ENST00000638454 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
PRAMEF13-202ENST00000638454 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.17
PRAMEF13-202ENST00000638454 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
PRAMEF13-202ENST00000638454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
PRAMEF13-202ENST00000638454 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
PRAMEF13-202ENST00000638454 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
PRAMEF13-202ENST00000638454 ABCA8O94911 1581 aa16.09■□□□□ 0.17
PRAMEF13-202ENST00000638454 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
PRAMEF13-202ENST00000638454 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.16
PRAMEF13-202ENST00000638454 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
PRAMEF13-202ENST00000638454 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
PRAMEF13-202ENST00000638454 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
PRAMEF13-202ENST00000638454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRAMEF13-202ENST00000638454 CDK13Q14004 1512 aaKnown RBP16.05■□□□□ 0.16
PRAMEF13-202ENST00000638454 RRBP1Q9P2E9 1410 aaKnown RBP16.04■□□□□ 0.16
PRAMEF13-202ENST00000638454 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
PRAMEF13-202ENST00000638454 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
PRAMEF13-202ENST00000638454 ABCC2Q92887 1545 aa16.02■□□□□ 0.15
PRAMEF13-202ENST00000638454 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
PRAMEF13-202ENST00000638454 UHRF1BP1LA0JNW5 1464 aa16■□□□□ 0.15
PRAMEF13-202ENST00000638454 NCOA2Q15596 1464 aa16■□□□□ 0.15
PRAMEF13-202ENST00000638454 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
PRAMEF13-202ENST00000638454 ARID3CA6NKF2 412 aa16■□□□□ 0.15
PRAMEF13-202ENST00000638454 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
PRAMEF13-202ENST00000638454 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
PRAMEF13-202ENST00000638454 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
PRAMEF13-202ENST00000638454 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms