RNA–Protein interactions for RNA: ENST00000638151.1

SCN2A-217, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 2,832 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-217ENST00000638151 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
SCN2A-217ENST00000638151 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
SCN2A-217ENST00000638151 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
SCN2A-217ENST00000638151 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.44
SCN2A-217ENST00000638151 FHOD3Q2V2M9 1422 aa12.27□□□□□ -0.44
SCN2A-217ENST00000638151 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
SCN2A-217ENST00000638151 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
SCN2A-217ENST00000638151 HIRIP3Q9BW71 556 aaPredicted RBP12.25□□□□□ -0.45
SCN2A-217ENST00000638151 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
SCN2A-217ENST00000638151 ARID3CA6NKF2 412 aa12.23□□□□□ -0.45
SCN2A-217ENST00000638151 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
SCN2A-217ENST00000638151 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
SCN2A-217ENST00000638151 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
SCN2A-217ENST00000638151 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
SCN2A-217ENST00000638151 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
SCN2A-217ENST00000638151 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
SCN2A-217ENST00000638151 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
SCN2A-217ENST00000638151 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
SCN2A-217ENST00000638151 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
SCN2A-217ENST00000638151 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
SCN2A-217ENST00000638151 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
SCN2A-217ENST00000638151 MAPKBP1O60336 1514 aa12.14□□□□□ -0.47
SCN2A-217ENST00000638151 SETD5Q9C0A6 1442 aa12.13□□□□□ -0.47
SCN2A-217ENST00000638151 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
SCN2A-217ENST00000638151 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
SCN2A-217ENST00000638151 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
SCN2A-217ENST00000638151 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
SCN2A-217ENST00000638151 CHIC2Q9UKJ5 165 aa12.1□□□□□ -0.47
SCN2A-217ENST00000638151 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
SCN2A-217ENST00000638151 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
SCN2A-217ENST00000638151 WDR97A6NE52 1622 aa12.06□□□□□ -0.48
SCN2A-217ENST00000638151 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
SCN2A-217ENST00000638151 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
SCN2A-217ENST00000638151 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCN2A-217ENST00000638151 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
SCN2A-217ENST00000638151 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
SCN2A-217ENST00000638151 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
SCN2A-217ENST00000638151 FGD6Q6ZV73 1430 aa12.01□□□□□ -0.49
SCN2A-217ENST00000638151 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
SCN2A-217ENST00000638151 FOXD1Q16676 465 aa12.01□□□□□ -0.49
SCN2A-217ENST00000638151 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
SCN2A-217ENST00000638151 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
SCN2A-217ENST00000638151 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
SCN2A-217ENST00000638151 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
SCN2A-217ENST00000638151 CFAP43Q8NDM7 1665 aa11.99□□□□□ -0.49
SCN2A-217ENST00000638151 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
SCN2A-217ENST00000638151 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
SCN2A-217ENST00000638151 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
SCN2A-217ENST00000638151 TRIM52Q96A61 297 aa11.96□□□□□ -0.49
SCN2A-217ENST00000638151 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.49
SCN2A-217ENST00000638151 CUL7Q14999 1698 aa11.96□□□□□ -0.49
SCN2A-217ENST00000638151 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.49
SCN2A-217ENST00000638151 BCANQ96GW7 911 aa11.96□□□□□ -0.49
SCN2A-217ENST00000638151 CTTNBP2Q8WZ74 1663 aa11.96□□□□□ -0.5
SCN2A-217ENST00000638151 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
SCN2A-217ENST00000638151 ABCA5Q8WWZ7 1642 aa11.95□□□□□ -0.5
SCN2A-217ENST00000638151 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
SCN2A-217ENST00000638151 ZNF644Q9H582 1327 aaPredicted RBP11.94□□□□□ -0.5
SCN2A-217ENST00000638151 FBLN2P98095 1184 aa11.93□□□□□ -0.5
SCN2A-217ENST00000638151 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
SCN2A-217ENST00000638151 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
SCN2A-217ENST00000638151 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
SCN2A-217ENST00000638151 NAIPQ13075 1403 aa11.92□□□□□ -0.5
SCN2A-217ENST00000638151 CDK13Q14004 1512 aaKnown RBP11.92□□□□□ -0.5
SCN2A-217ENST00000638151 MYOM3Q5VTT5 1437 aa11.91□□□□□ -0.5
SCN2A-217ENST00000638151 SAMD9Q5K651 1589 aa11.9□□□□□ -0.51
SCN2A-217ENST00000638151 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
SCN2A-217ENST00000638151 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
SCN2A-217ENST00000638151 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
SCN2A-217ENST00000638151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCN2A-217ENST00000638151 RBM19Q9Y4C8 960 aaKnown RBP11.87□□□□□ -0.51
SCN2A-217ENST00000638151 UACAQ9BZF9 1416 aa11.86□□□□□ -0.51
SCN2A-217ENST00000638151 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
SCN2A-217ENST00000638151 KDM6BO15054 1643 aa11.86□□□□□ -0.51
SCN2A-217ENST00000638151 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
SCN2A-217ENST00000638151 ANP32CO43423 234 aa11.85□□□□□ -0.51
SCN2A-217ENST00000638151 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
SCN2A-217ENST00000638151 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
SCN2A-217ENST00000638151 FKBP8Q14318 412 aa11.84□□□□□ -0.51
SCN2A-217ENST00000638151 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
SCN2A-217ENST00000638151 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
SCN2A-217ENST00000638151 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
SCN2A-217ENST00000638151 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
SCN2A-217ENST00000638151 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
SCN2A-217ENST00000638151 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
SCN2A-217ENST00000638151 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
SCN2A-217ENST00000638151 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
SCN2A-217ENST00000638151 IQGAP2Q13576 1575 aa11.81□□□□□ -0.52
SCN2A-217ENST00000638151 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
SCN2A-217ENST00000638151 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
SCN2A-217ENST00000638151 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
SCN2A-217ENST00000638151 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
SCN2A-217ENST00000638151 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
SCN2A-217ENST00000638151 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
SCN2A-217ENST00000638151 PBRM1Q86U86 1689 aa11.79□□□□□ -0.52
SCN2A-217ENST00000638151 KDM5BQ9UGL1 1544 aa11.78□□□□□ -0.52
SCN2A-217ENST00000638151 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
SCN2A-217ENST00000638151 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
SCN2A-217ENST00000638151 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
SCN2A-217ENST00000638151 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms