RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 NEFLP07196 543 aa18.48■□□□□ 0.55
CHRNA7-223ENST00000637033 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
CHRNA7-223ENST00000637033 SETD5Q9C0A6 1442 aa18.46■□□□□ 0.55
CHRNA7-223ENST00000637033 ANP32CO43423 234 aa18.45■□□□□ 0.54
CHRNA7-223ENST00000637033 IGF1RP08069 1367 aa18.45■□□□□ 0.54
CHRNA7-223ENST00000637033 ANP32EQ9BTT0 268 aa18.45■□□□□ 0.54
CHRNA7-223ENST00000637033 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
CHRNA7-223ENST00000637033 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
CHRNA7-223ENST00000637033 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
CHRNA7-223ENST00000637033 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
CHRNA7-223ENST00000637033 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
CHRNA7-223ENST00000637033 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
CHRNA7-223ENST00000637033 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
CHRNA7-223ENST00000637033 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-223ENST00000637033 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
CHRNA7-223ENST00000637033 BIVM-ERCC5R4GMW8 1640 aa18.36■□□□□ 0.53
CHRNA7-223ENST00000637033 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
CHRNA7-223ENST00000637033 TONSLQ96HA7 1378 aa18.33■□□□□ 0.52
CHRNA7-223ENST00000637033 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
CHRNA7-223ENST00000637033 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
CHRNA7-223ENST00000637033 FOXD1Q16676 465 aa18.28■□□□□ 0.52
CHRNA7-223ENST00000637033 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
CHRNA7-223ENST00000637033 CFTRP13569 1480 aa18.27■□□□□ 0.52
CHRNA7-223ENST00000637033 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
CHRNA7-223ENST00000637033 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
CHRNA7-223ENST00000637033 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
CHRNA7-223ENST00000637033 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
CHRNA7-223ENST00000637033 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
CHRNA7-223ENST00000637033 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
CHRNA7-223ENST00000637033 MTUS2Q5JR59 1369 aa18.2■□□□□ 0.5
CHRNA7-223ENST00000637033 MSH5O43196 834 aa18.18■□□□□ 0.5
CHRNA7-223ENST00000637033 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
CHRNA7-223ENST00000637033 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
CHRNA7-223ENST00000637033 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
CHRNA7-223ENST00000637033 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
CHRNA7-223ENST00000637033 HSPA5P11021 654 aaKnown RBP18.15■□□□□ 0.5
CHRNA7-223ENST00000637033 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
CHRNA7-223ENST00000637033 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
CHRNA7-223ENST00000637033 B4GALNT3Q6L9W6 998 aa18.11■□□□□ 0.49
CHRNA7-223ENST00000637033 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
CHRNA7-223ENST00000637033 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
CHRNA7-223ENST00000637033 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHRNA7-223ENST00000637033 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
CHRNA7-223ENST00000637033 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
CHRNA7-223ENST00000637033 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
CHRNA7-223ENST00000637033 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
CHRNA7-223ENST00000637033 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.49
CHRNA7-223ENST00000637033 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
CHRNA7-223ENST00000637033 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
CHRNA7-223ENST00000637033 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
CHRNA7-223ENST00000637033 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
CHRNA7-223ENST00000637033 NESP48681 1621 aa18.04■□□□□ 0.48
CHRNA7-223ENST00000637033 L3MBTL2Q969R5 705 aa18.03■□□□□ 0.48
CHRNA7-223ENST00000637033 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
CHRNA7-223ENST00000637033 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHRNA7-223ENST00000637033 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
CHRNA7-223ENST00000637033 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
CHRNA7-223ENST00000637033 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
CHRNA7-223ENST00000637033 NAIPQ13075 1403 aa17.97■□□□□ 0.47
CHRNA7-223ENST00000637033 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
CHRNA7-223ENST00000637033 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
CHRNA7-223ENST00000637033 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
CHRNA7-223ENST00000637033 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
CHRNA7-223ENST00000637033 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
CHRNA7-223ENST00000637033 FYCO1Q9BQS8 1478 aa17.93■□□□□ 0.46
CHRNA7-223ENST00000637033 NBR1Q14596 966 aa17.93■□□□□ 0.46
CHRNA7-223ENST00000637033 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
CHRNA7-223ENST00000637033 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
CHRNA7-223ENST00000637033 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
CHRNA7-223ENST00000637033 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
CHRNA7-223ENST00000637033 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
CHRNA7-223ENST00000637033 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
CHRNA7-223ENST00000637033 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
CHRNA7-223ENST00000637033 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-223ENST00000637033 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
CHRNA7-223ENST00000637033 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
CHRNA7-223ENST00000637033 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
CHRNA7-223ENST00000637033 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
CHRNA7-223ENST00000637033 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
CHRNA7-223ENST00000637033 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
CHRNA7-223ENST00000637033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHRNA7-223ENST00000637033 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
CHRNA7-223ENST00000637033 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
CHRNA7-223ENST00000637033 KDM6BO15054 1643 aa17.79■□□□□ 0.44
CHRNA7-223ENST00000637033 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
CHRNA7-223ENST00000637033 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CHRNA7-223ENST00000637033 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
CHRNA7-223ENST00000637033 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
CHRNA7-223ENST00000637033 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
CHRNA7-223ENST00000637033 DENND4BO75064 1496 aaPredicted RBP17.77■□□□□ 0.44
CHRNA7-223ENST00000637033 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
CHRNA7-223ENST00000637033 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
CHRNA7-223ENST00000637033 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.43
CHRNA7-223ENST00000637033 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
CHRNA7-223ENST00000637033 CCDC136Q96JN2 1154 aa17.76■□□□□ 0.43
CHRNA7-223ENST00000637033 EFCAB5A4FU69 1503 aa17.75■□□□□ 0.43
CHRNA7-223ENST00000637033 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
CHRNA7-223ENST00000637033 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
CHRNA7-223ENST00000637033 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
CHRNA7-223ENST00000637033 ZBED9Q6R2W3 1325 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms