RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 DNMBPQ6XZF7 1577 aa3.55□□□□□ -1.84
SYNGAP1-215ENST00000636443 SCAF1Q9H7N4 1312 aaKnown RBP3.54□□□□□ -1.84
SYNGAP1-215ENST00000636443 PBRM1Q86U86 1689 aa3.54□□□□□ -1.84
SYNGAP1-215ENST00000636443 PPRC1Q5VV67 1664 aaKnown RBP3.53□□□□□ -1.84
SYNGAP1-215ENST00000636443 GRIN2BQ13224 1484 aa3.53□□□□□ -1.84
SYNGAP1-215ENST00000636443 RAD54L2Q9Y4B4 1467 aa3.53□□□□□ -1.84
SYNGAP1-215ENST00000636443 ADCY10Q96PN6 1610 aa3.52□□□□□ -1.85
SYNGAP1-215ENST00000636443 POLA1P09884 1462 aaPredicted RBP3.52□□□□□ -1.85
SYNGAP1-215ENST00000636443 TEX14Q8IWB6 1497 aa3.52□□□□□ -1.85
SYNGAP1-215ENST00000636443 WIZO95785 1651 aa3.52□□□□□ -1.85
SYNGAP1-215ENST00000636443 WDR97A6NE52 1622 aa3.52□□□□□ -1.85
SYNGAP1-215ENST00000636443 UBAP1LF5GYI3 381 aa3.51□□□□□ -1.85
SYNGAP1-215ENST00000636443 RIMS1Q86UR5 1692 aaKnown RBP3.51□□□□□ -1.85
SYNGAP1-215ENST00000636443 SOGA1O94964 1423 aa3.51□□□□□ -1.85
SYNGAP1-215ENST00000636443 ARID4BQ4LE39 1312 aaPredicted RBP3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 CFAP43Q8NDM7 1665 aa3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 COL17A1Q9UMD9 1497 aaPredicted RBP3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 IFFO2Q5TF58 517 aa3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 DMRT2Q9Y5R5 561 aa3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 SHROOM2Q13796 1616 aa3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 MADDQ8WXG6 1647 aa3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 PRG4Q92954 1404 aaPredicted RBP3.5□□□□□ -1.85
SYNGAP1-215ENST00000636443 ADAMTSL3P82987 1691 aa3.49□□□□□ -1.85
SYNGAP1-215ENST00000636443 GRIN2AQ12879 1464 aa3.48□□□□□ -1.85
SYNGAP1-215ENST00000636443 TTBK1Q5TCY1 1321 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-215ENST00000636443 PIP4K2BP78356 416 aa3.48□□□□□ -1.85
SYNGAP1-215ENST00000636443 SENP3Q9H4L4 574 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-215ENST00000636443 SETD1AO15047 1707 aaKnown RBP3.47□□□□□ -1.85
SYNGAP1-215ENST00000636443 LTBP4Q8N2S1 1624 aa3.47□□□□□ -1.85
SYNGAP1-215ENST00000636443 MAP3K4Q9Y6R4 1608 aa3.47□□□□□ -1.85
SYNGAP1-215ENST00000636443 BCORL1Q5H9F3 1711 aa3.47□□□□□ -1.85
SYNGAP1-215ENST00000636443 IQSEC2Q5JU85 1478 aa3.47□□□□□ -1.85
SYNGAP1-215ENST00000636443 GLI2P10070 1586 aa3.46□□□□□ -1.85
SYNGAP1-215ENST00000636443 CUL7Q14999 1698 aa3.46□□□□□ -1.85
SYNGAP1-215ENST00000636443 ASXL2Q76L83 1435 aa3.46□□□□□ -1.86
SYNGAP1-215ENST00000636443 HSPA1LP34931 641 aa3.46□□□□□ -1.86
SYNGAP1-215ENST00000636443 PLB1Q6P1J6 1458 aa3.46□□□□□ -1.86
SYNGAP1-215ENST00000636443 YEATS2Q9ULM3 1422 aa3.45□□□□□ -1.86
SYNGAP1-215ENST00000636443 KIAA0586Q9BVV6 1533 aa3.45□□□□□ -1.86
SYNGAP1-215ENST00000636443 FGD5Q6ZNL6 1462 aa3.45□□□□□ -1.86
SYNGAP1-215ENST00000636443 PREX1Q8TCU6 1659 aa3.45□□□□□ -1.86
SYNGAP1-215ENST00000636443 PTPRTO14522 1441 aa3.44□□□□□ -1.86
SYNGAP1-215ENST00000636443 NUP160Q12769 1436 aa3.44□□□□□ -1.86
SYNGAP1-215ENST00000636443 STRCQ7RTU9 1775 aa3.44□□□□□ -1.86
SYNGAP1-215ENST00000636443 ADAMTS12P58397 1594 aa3.44□□□□□ -1.86
SYNGAP1-215ENST00000636443 JPH4Q96JJ6 628 aa3.43□□□□□ -1.86
SYNGAP1-215ENST00000636443 EPRSP07814 1512 aaKnown RBP3.42□□□□□ -1.86
SYNGAP1-215ENST00000636443 TOP2AP11388 1531 aaKnown RBP3.42□□□□□ -1.86
SYNGAP1-215ENST00000636443 ABCA5Q8WWZ7 1642 aa3.41□□□□□ -1.86
SYNGAP1-215ENST00000636443 FER1L4A9Z1Z3 1794 aa3.41□□□□□ -1.86
SYNGAP1-215ENST00000636443 ABCC2Q92887 1545 aa3.41□□□□□ -1.86
SYNGAP1-215ENST00000636443 RBM33Q96EV2 1170 aaKnown RBP3.41□□□□□ -1.86
SYNGAP1-215ENST00000636443 TOM1O60784 492 aa3.4□□□□□ -1.87
SYNGAP1-215ENST00000636443 MLECQ14165 292 aa3.4□□□□□ -1.87
SYNGAP1-215ENST00000636443 UHRF1BP1Q6BDS2 1440 aa3.4□□□□□ -1.87
SYNGAP1-215ENST00000636443 POGZQ7Z3K3 1410 aa3.4□□□□□ -1.87
SYNGAP1-215ENST00000636443 KIAA0556O60303 1618 aa3.4□□□□□ -1.87
SYNGAP1-215ENST00000636443 RUSC2Q8N2Y8 1516 aa3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 FHAD1B1AJZ9 1412 aa3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 FOXD1Q16676 465 aa3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 POTEAQ6S8J7 498 aa3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 UPF1Q92900 1129 aaKnown RBP eCLIP3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 RGS17Q9UGC6 210 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 ZNF335Q9H4Z2 1342 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-215ENST00000636443 PTPRGP23470 1445 aa3.38□□□□□ -1.87
SYNGAP1-215ENST00000636443 CD109Q6YHK3 1445 aa3.38□□□□□ -1.87
SYNGAP1-215ENST00000636443 ZCCHC11Q5TAX3 1644 aaKnown RBP3.38□□□□□ -1.87
SYNGAP1-215ENST00000636443 SENP3-EIF4A1A0A087X0R7 540 aa3.38□□□□□ -1.87
SYNGAP1-215ENST00000636443 FANCAO15360 1455 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 TRIM52Q96A61 297 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 KCNH8Q96L42 1107 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 ZRANB1Q9UGI0 708 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 MAGI3Q5TCQ9 1506 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 TTC37Q6PGP7 1564 aa3.37□□□□□ -1.87
SYNGAP1-215ENST00000636443 CCDC88BA6NC98 1476 aa3.36□□□□□ -1.87
SYNGAP1-215ENST00000636443 CUX1P39880 1505 aa3.36□□□□□ -1.87
SYNGAP1-215ENST00000636443 ARHGEF40Q8TER5 1519 aa3.36□□□□□ -1.87
SYNGAP1-215ENST00000636443 WDR7Q9Y4E6 1490 aa3.35□□□□□ -1.87
SYNGAP1-215ENST00000636443 ABCA10Q8WWZ4 1543 aa3.35□□□□□ -1.87
SYNGAP1-215ENST00000636443 RAPGEF3O95398 923 aa3.35□□□□□ -1.87
SYNGAP1-215ENST00000636443 YY1P25490 414 aa3.35□□□□□ -1.87
SYNGAP1-215ENST00000636443 CEBPAP49715 358 aaPredicted RBP3.35□□□□□ -1.87
SYNGAP1-215ENST00000636443 ARAP3Q8WWN8 1544 aa3.34□□□□□ -1.87
SYNGAP1-215ENST00000636443 SUPT6HQ7KZ85 1726 aaKnown RBP3.34□□□□□ -1.87
SYNGAP1-215ENST00000636443 TNIKQ9UKE5 1360 aa3.34□□□□□ -1.88
SYNGAP1-215ENST00000636443 PTPRKQ15262 1439 aa3.34□□□□□ -1.88
SYNGAP1-215ENST00000636443 CARMIL2Q6F5E8 1435 aa3.34□□□□□ -1.88
SYNGAP1-215ENST00000636443 UACAQ9BZF9 1416 aa3.34□□□□□ -1.88
SYNGAP1-215ENST00000636443 SETBP1Q9Y6X0 1596 aa3.34□□□□□ -1.88
SYNGAP1-215ENST00000636443 NCKAP5LQ9HCH0 1330 aa3.33□□□□□ -1.88
SYNGAP1-215ENST00000636443 NCOA1Q15788 1441 aa3.33□□□□□ -1.88
SYNGAP1-215ENST00000636443 AKNAQ7Z591 1439 aa3.33□□□□□ -1.88
SYNGAP1-215ENST00000636443 UHRF1BP1LA0JNW5 1464 aa3.33□□□□□ -1.88
SYNGAP1-215ENST00000636443 CAMSAP1Q5T5Y3 1602 aa3.33□□□□□ -1.88
SYNGAP1-215ENST00000636443 MEX3CQ5U5Q3 659 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-215ENST00000636443 ESF1Q9H501 851 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-215ENST00000636443 ERICH3Q5RHP9 1530 aa3.32□□□□□ -1.88
SYNGAP1-215ENST00000636443 KDM5BQ9UGL1 1544 aa3.32□□□□□ -1.88
SYNGAP1-215ENST00000636443 FRMPD1Q5SYB0 1578 aa3.32□□□□□ -1.88
SYNGAP1-215ENST00000636443 RAPGEF6Q8TEU7 1601 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms