RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
CACNA1A-220ENST00000635988 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
CACNA1A-220ENST00000635988 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
CACNA1A-220ENST00000635988 LRRC9Q6ZRR7 1453 aa20.97■□□□□ 0.95
CACNA1A-220ENST00000635988 CFTRP13569 1480 aa20.97■□□□□ 0.95
CACNA1A-220ENST00000635988 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-220ENST00000635988 BCANQ96GW7 911 aa20.94■□□□□ 0.94
CACNA1A-220ENST00000635988 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
CACNA1A-220ENST00000635988 IGF1RP08069 1367 aa20.91■□□□□ 0.94
CACNA1A-220ENST00000635988 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
CACNA1A-220ENST00000635988 ANP32CO43423 234 aa20.89■□□□□ 0.94
CACNA1A-220ENST00000635988 SIN3AQ96ST3 1273 aa20.88■□□□□ 0.93
CACNA1A-220ENST00000635988 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
CACNA1A-220ENST00000635988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
CACNA1A-220ENST00000635988 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-220ENST00000635988 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-220ENST00000635988 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
CACNA1A-220ENST00000635988 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
CACNA1A-220ENST00000635988 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
CACNA1A-220ENST00000635988 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
CACNA1A-220ENST00000635988 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-220ENST00000635988 FYCO1Q9BQS8 1478 aa20.73■□□□□ 0.91
CACNA1A-220ENST00000635988 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
CACNA1A-220ENST00000635988 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
CACNA1A-220ENST00000635988 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
CACNA1A-220ENST00000635988 EFCAB5A4FU69 1503 aa20.69■□□□□ 0.9
CACNA1A-220ENST00000635988 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
CACNA1A-220ENST00000635988 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-220ENST00000635988 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
CACNA1A-220ENST00000635988 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
CACNA1A-220ENST00000635988 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
CACNA1A-220ENST00000635988 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
CACNA1A-220ENST00000635988 FGD6Q6ZV73 1430 aa20.63■□□□□ 0.89
CACNA1A-220ENST00000635988 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
CACNA1A-220ENST00000635988 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
CACNA1A-220ENST00000635988 HFM1A2PYH4 1435 aa20.62■□□□□ 0.89
CACNA1A-220ENST00000635988 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
CACNA1A-220ENST00000635988 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-220ENST00000635988 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
CACNA1A-220ENST00000635988 FMN1Q68DA7 1419 aa20.58■□□□□ 0.88
CACNA1A-220ENST00000635988 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
CACNA1A-220ENST00000635988 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
CACNA1A-220ENST00000635988 MSH5O43196 834 aa20.53■□□□□ 0.88
CACNA1A-220ENST00000635988 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
CACNA1A-220ENST00000635988 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
CACNA1A-220ENST00000635988 CUL7Q14999 1698 aa20.5■□□□□ 0.87
CACNA1A-220ENST00000635988 NAIPQ13075 1403 aa20.5■□□□□ 0.87
CACNA1A-220ENST00000635988 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
CACNA1A-220ENST00000635988 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
CACNA1A-220ENST00000635988 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
CACNA1A-220ENST00000635988 PTPRKQ15262 1439 aa20.48■□□□□ 0.87
CACNA1A-220ENST00000635988 KDM5BQ9UGL1 1544 aa20.48■□□□□ 0.87
CACNA1A-220ENST00000635988 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
CACNA1A-220ENST00000635988 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
CACNA1A-220ENST00000635988 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
CACNA1A-220ENST00000635988 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
CACNA1A-220ENST00000635988 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
CACNA1A-220ENST00000635988 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
CACNA1A-220ENST00000635988 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
CACNA1A-220ENST00000635988 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-220ENST00000635988 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
CACNA1A-220ENST00000635988 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-220ENST00000635988 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
CACNA1A-220ENST00000635988 CNTLNQ9NXG0 1405 aa20.39■□□□□ 0.86
CACNA1A-220ENST00000635988 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-220ENST00000635988 EHBP1L1Q8N3D4 1523 aa20.38■□□□□ 0.85
CACNA1A-220ENST00000635988 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-220ENST00000635988 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-220ENST00000635988 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
CACNA1A-220ENST00000635988 SAMD9Q5K651 1589 aa20.36■□□□□ 0.85
CACNA1A-220ENST00000635988 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
CACNA1A-220ENST00000635988 AKNAQ7Z591 1439 aa20.35■□□□□ 0.85
CACNA1A-220ENST00000635988 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
CACNA1A-220ENST00000635988 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
CACNA1A-220ENST00000635988 GCC2Q8IWJ2 1684 aa20.33■□□□□ 0.84
CACNA1A-220ENST00000635988 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.84
CACNA1A-220ENST00000635988 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
CACNA1A-220ENST00000635988 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
CACNA1A-220ENST00000635988 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-220ENST00000635988 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-220ENST00000635988 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
CACNA1A-220ENST00000635988 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
CACNA1A-220ENST00000635988 CCDC7Q96M83 1385 aa20.28■□□□□ 0.84
CACNA1A-220ENST00000635988 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
CACNA1A-220ENST00000635988 DENND4BO75064 1496 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-220ENST00000635988 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
CACNA1A-220ENST00000635988 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
CACNA1A-220ENST00000635988 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
CACNA1A-220ENST00000635988 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
CACNA1A-220ENST00000635988 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
CACNA1A-220ENST00000635988 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
CACNA1A-220ENST00000635988 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
CACNA1A-220ENST00000635988 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
CACNA1A-220ENST00000635988 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
CACNA1A-220ENST00000635988 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
CACNA1A-220ENST00000635988 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
CACNA1A-220ENST00000635988 C11orf95C9JLR9 678 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-220ENST00000635988 RPRD2Q5VT52 1461 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-220ENST00000635988 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-220ENST00000635988 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms